HMM Summary Page: TIGR03777

Functionrickettsial palindromic element RPE4 domain
Trusted Cutoff23.95
Domain Trusted Cutoff23.95
Noise Cutoff22.90
Domain Noise Cutoff22.90
Isology Typedomain
HMM Length32
AuthorHaft DH
Entry DateJun 16 2009 3:52PM
Last ModifiedMar 2 2011 2:55PM
CommentThis HMM describes protein translations of a family, RPE4, of Rickettsia palindromic elements (RPE). The elements spread within a genome as selfish genetic elements, inserting into genes additional coding region that does not disrupt the reading frame. This model finds RPE-encoded regions in several Rickettsial species and, so far, no where else.
Genome PropertyGenProp0476: protein-coding palindromic elements (HMM)