HMM Summary Page: TIGR03787

AccessionTIGR03787
Namemarine_sort_RR
Functionproteobacterial dedicated sortase system response regulator
Gene SymbolpdsR
Trusted Cutoff335.70
Domain Trusted Cutoff335.70
Noise Cutoff310.60
Domain Noise Cutoff310.60
Isology Typeequivalog
HMM Length227
AuthorHaft DH
Entry DateJun 23 2009 1:24PM
Last ModifiedFeb 14 2011 3:27PM
CommentThis model describes a family of DNA-binding response regulator proteins, associated with an adjacent histidine kinase (TIGR03785) to form a two-component system. This system co-occurs with, and often is adjacent to, a proteobacterial variant form of the protein sorting transpeptidase called sortase (TIGR03784), and a single target protein for the sortase. We give this protein the gene symbol pdsR, for Proteobacterial Dedicated Sortase system Response regulator.
Genome PropertyGenProp0859: protein sorting system, proteobacterial dedicated sortase type (HMM)
GenProp0859: protein sorting system, proteobacterial dedicated sortase type (HMM)
GenProp0859: protein sorting system, proteobacterial dedicated sortase type (HMM)