HMM Summary Page: TIGR03807

AccessionTIGR03807
NameRR_fam_repeat
Functionputative cofactor-binding repeat
Trusted Cutoff15.75
Domain Trusted Cutoff15.75
Noise Cutoff14.80
Domain Noise Cutoff14.80
Isology Typerepeat
HMM Length27
AuthorHaft DH
Entry DateAug 14 2009 3:06PM
Last ModifiedFeb 14 2011 3:27PM
CommentThis model describes a small repeat found in a family of proteins that crosses the plasma membrane by twin-arginine translation, which usually signifies the presence of a bound cofactor. This repeat shows similarity to the beta-helical repeat, in which three beta-strands per repeat wind once per repeat around in a right-handed helical stack of parallel beta structure.