| Accession | TIGR03901 |
| Name | MYXO-CTERM |
| Function | MYXO-CTERM domain |
| Trusted Cutoff | 25.50 |
| Domain Trusted Cutoff | 25.50 |
| Noise Cutoff | 15.00 |
| Domain Noise Cutoff | 15.00 |
| Isology Type | domain |
| HMM Length | 33 |
| Author | Haft DH |
| Entry Date | Dec 15 2009 4:15PM |
| Last Modified | Apr 12 2012 5:44PM |
| Comment | This model describes MYXO-CTERM, a C-terminal putative protein sorting domain, analogous to LPXTG (TIGR01167) and PEP-CTERM (TIGR02595). It is restricted to the Myxococcales, a division of the Deltaproteobacteria, with over 60 members occurring in Plesiocystis pacifica SIR-1. An example protein is TraA, involved in outer membrane exchange (lipids and proteins) through which one strain of Myxococcus can repair a mobility defect in another. The trusted cutoff for this model is set artificially high to avoid false positives, and consequently only about half of all members are recognized. |
| References | RN [1]
RT Cell Contact–Dependent Outer Membrane Exchange in Myxobacteria: Genetic Determinants and Mechanism
RA Pathak DT, Wei1 X, Bucuvalas A, Haft DH, Gerloff D, Wall D
RL PLoS Genet 2012 8(4): e1002626 |
| Genome Property | GenProp0960: protein sorting system, Deltaproteobacteria (incomplete) (HMM) |
