HMM Summary Page: TIGR03914

AccessionTIGR03914
NameUDG_fam_dom
Functionuracil-DNA glycosylase family domain
Trusted Cutoff189.95
Domain Trusted Cutoff189.95
Noise Cutoff170.20
Domain Noise Cutoff170.20
Isology Typehypoth_equivalog_domain
EC Number3.2.2.-
HMM Length231
AuthorHaft DH
Entry DateJan 9 2010 3:55PM
Last ModifiedFeb 14 2011 3:27PM
CommentThis model represents a clade within the uracil-DNA glycosylase superfamily. Among characterized proteins, it most closely resembles the Thermus thermophilus uracil-DNA glycosylase TTUDGA, which acts uracil (deamidated cytosine) in both single-stranded DNA and U/G pairs of double-stranded DNA. This domain may occur either as a stand-alone protein or as the C-terminal domain of a fusion with another domain that always pairs with a particular radical-SAM family protein.
Genome PropertyGenProp0903: radical SAM/uracil DNA glycosylase system (HMM)
GenProp0903: radical SAM/uracil DNA glycosylase system (HMM)
GenProp0903: radical SAM/uracil DNA glycosylase system (HMM)