HMM Summary Page: TIGR03919

Functiontype VII secretion protein EccB
Gene SymboleccB
Trusted Cutoff154.00
Domain Trusted Cutoff154.00
Noise Cutoff142.00
Domain Noise Cutoff142.00
Isology Typeequivalog
HMM Length457
AuthorHaft DH
Entry DateFeb 1 2010 1:47PM
Last ModifiedFeb 14 2011 3:27PM
CommentThis model represents the transmembrane protein EccB of the actinobacterial flavor of type VII secretion systems. Species such as Mycobacterium tuberculosis have several instances of this system per genome, designated EccB1, EccB2, etc. This model does not identify functionally related proteins in the Firmicutes such as Staphylococcus aureus and Bacillus anthracis.
ReferencesRN [1] RM PMID:19876390 RT Systematic genetic nomenclature for type VII secretion systems. RA Bitter W, Houben EN, Bottai D, Brodin P, Brown EJ, Cox JS, Derbyshire K, Fortune SM, Gao LY, Liu J, Gey van Pittius NC, Pym AS, Rubin EJ, Sherman DR, Cole ST, Brosch R RL PLoS Pathog. 2009 Oct;5(10):e1000507. Epub 2009 Oct 30.
Genome PropertyGenProp0904: type VII secretion, Actinobacteria form (HMM)