HMM Summary Page: TIGR03925

AccessionTIGR03925
NameT7SS_EccC_b
Functiontype VII secretion protein EccCb
Gene SymboleccCb
Trusted Cutoff346.55
Domain Trusted Cutoff346.55
Noise Cutoff251.05
Domain Noise Cutoff251.05
Isology Typeequivalog_domain
HMM Length564
AuthorHaft DH
Entry DateFeb 2 2010 4:44PM
Last ModifiedFeb 14 2011 3:27PM
CommentThis model represents the C-terminal domain or EccCb subunit of the type VII secretion protein EccC as found in the Actinobacteria. Type VII secretion is defined more broadly as including secretion systems for ESAT-6-like proteins in the Firmicutes as well as in the Actinobacteria, but this family does not show close homologs in the Firmicutes.
ReferencesDR PFAM; PF01580; FtsK/SpoIIIE family RN [1] RM PMID:19876390 RT Systematic genetic nomenclature for type VII secretion systems. RA Bitter W, Houben EN, Bottai D, Brodin P, Brown EJ, Cox JS, Derbyshire K, Fortune SM, Gao LY, Liu J, Gey van Pittius NC, Pym AS, Rubin EJ, Sherman DR, Cole ST, Brosch R RL PLoS Pathog. 2009 Oct;5(10):e1000507. Epub 2009 Oct 30.
Genome PropertyGenProp0904: type VII secretion, Actinobacteria form (HMM)
GenProp0904: type VII secretion, Actinobacteria form (HMM)
GenProp0904: type VII secretion, Actinobacteria form (HMM)
GenProp0904: type VII secretion, Actinobacteria form (HMM)
GenProp0904: type VII secretion, Actinobacteria form (HMM)
GenProp0904: type VII secretion, Actinobacteria form (HMM)