HMM Summary Page: TIGR04106

AccessionTIGR04106
Namecas_GSU0052
FunctionCRISPR-associated protein GSU0052/csb3, Dpsyc system
Gene Symbolcsb3
Trusted Cutoff125.00
Domain Trusted Cutoff125.00
Noise Cutoff30.00
Domain Noise Cutoff30.00
Isology Typeequivalog
HMM Length282
AuthorHaft DH
Entry DateJan 26 2011 10:13AM
Last ModifiedFeb 14 2011 3:27PM
CommentThis HMM describes a CRISPR-associated (cas) protein unique to the Dpsyc subtype (named for Desulfotalea psychrophila), although not universal to the that subtype. Members of this family occur in CRISPR loci of Geobacter sulfurreducens PCA, Gemmata obscuriglobus UQM 2246, Rhodospirillum centenum SW, Planctomyces limnophilus DSM 3776, and Methylosinus trichosporium OB3b.
Genome PropertyGenProp0021: CRISPR region (HMM)
GenProp0469: CRISPR system, Dpsyc subtype (HMM)