HMM Summary Page: TIGR04173

AccessionTIGR04173
NamePIP_CTERM
FunctionPIP-CTERM protein sorting domain
Trusted Cutoff30.00
Domain Trusted Cutoff30.00
Noise Cutoff25.00
Domain Noise Cutoff25.00
Isology Typesubfamily_domain
HMM Length27
AuthorHaft DH
Entry DateJun 6 2011 5:06PM
Last ModifiedFeb 10 2012 11:09AM
CommentProteins closely related to MJ_1469.1 from Methanocaldococcus jannaschii DSM 2661 are designated archaeosortase D (ArtD). ArtD appears to be a dedicated protein-sorting enzyme with a single target, a PKD domain (PF00801) repeat protein encoded by adjacent gene. This model describes the C-terminal putative protein-sorting region structurally similar to PEP-CTERM (TIGR02602) and found only on these methanogen PKD domain proteins.
ReferencesRN [1] RM PMID:22037399 RT Archaeosortases and exosortases are widely distributed systems linking membrane transit with posttranslational modification. RA Haft DH, Payne SH, Selengut JD RL J Bacteriol. 2012 Jan;194(1):36-48.
Genome PropertyGenProp0993: protein sorting system, PIP-CTERM/archaeosortase D (HMM)
GenProp0993: protein sorting system, PIP-CTERM/archaeosortase D (HMM)