HMM Summary Page: TIGR04235

AccessionTIGR04235
Nameseadorna_VP4
Functionseadornavirus VP4 protein
Trusted Cutoff80.00
Domain Trusted Cutoff80.00
Noise Cutoff25.00
Domain Noise Cutoff25.00
Isology Typeequivalog
HMM Length618
AuthorHaft DH
Entry DateNov 21 2011 5:16PM
Last ModifiedFeb 10 2012 10:37AM
CommentThis protein family occurs in the seadornavirus virus group, with designation VP4 in Banna virus, Kadipiro virus, and Liao ning virus. Although this family has been suggested to resemble methyltransferases, members show apparent N-terminal sequence similarity to the outer capsid protein VP5 of the orbivirus group, such as bluetongue virus, which also belong to the Reoviridae.
ReferencesRN [1] RM PMID:10811934 RT Complete sequence determination and genetic analysis of Banna virus and Kadipiro virus: proposal for assignment to a new genus (Seadornavirus) within the family Reoviridae. RA Attoui H, Billoir F, Biagini P, de Micco P, de Lamballerie X RL J Gen Virol. 2000 Jun;81(Pt 6):1507-15.
Genome PropertyGenProp1016: seadornavirus protein set (HMM)
GenProp1016: seadornavirus protein set (HMM)
GenProp1016: seadornavirus protein set (HMM)
GenProp1016: seadornavirus protein set (HMM)
GenProp1016: seadornavirus protein set (HMM)
GenProp1016: seadornavirus protein set (HMM)