HMM Summary Page: TIGR04249

AccessionTIGR04249
NameSCM_chp_ScmC
FunctionSynChlorMet cassette protein ScmC
Gene SymbolscmC
Trusted Cutoff125.00
Domain Trusted Cutoff125.00
Noise Cutoff65.00
Domain Noise Cutoff65.00
Isology Typehypoth_equivalog
HMM Length292
AuthorHaft DH
Entry DateDec 22 2011 9:16AM
Last ModifiedFeb 10 2012 10:37AM
CommentA biosynthesis cassette found in Syntrophobacter fumaroxidans MPOB, Chlorobium limicola DSM 245, Methanocella paludicola SANAE, and delta proteobacterium NaphS2 contains two PqqE-like radical SAM/SPASM domain proteins, a PqqD homolog, and a conserved hypothetical protein. These components suggest modification of a ribosomally produced peptide precursor, but the precursor has not been identified. Members of this family are designated ScmC.
Genome PropertyGenProp1029: radical SAM/SPASM system SynChlorMet (HMM)
GenProp1029: radical SAM/SPASM system SynChlorMet (HMM)
GenProp1029: radical SAM/SPASM system SynChlorMet (HMM)
GenProp1029: radical SAM/SPASM system SynChlorMet (HMM)
GenProp1029: radical SAM/SPASM system SynChlorMet (HMM)
GenProp1029: radical SAM/SPASM system SynChlorMet (HMM)