HMM Summary Page: TIGR04250
| Accession | TIGR04250 |
| Name | SCM_rSAM_ScmE |
| Function | SynChlorMet cassette radical SAM/SPASM protein ScmE |
| Gene Symbol | scmE |
| Trusted Cutoff | 400.00 |
| Domain Trusted Cutoff | 400.00 |
| Noise Cutoff | 175.00 |
| Domain Noise Cutoff | 175.00 |
| Isology Type | equivalog |
| HMM Length | 358 |
| Author | Haft DH |
| Entry Date | Dec 22 2011 9:25AM |
| Last Modified | Feb 10 2012 10:37AM |
| Comment | A biosynthesis cassette found in Syntrophobacter fumaroxidans MPOB, Chlorobium limicola DSM 245, Methanocella paludicola SANAE, and delta proteobacterium NaphS2 contains two PqqE-like radical SAM/SPASM domain proteins, a PqqD homolog, and a conserved hypothetical protein. These components suggest modification of a ribosomally produced peptide precursor, but the precursor has not been identified. Of the two PqqE homologs of the cassette, this family is the closer in sequence. |
| Genome Property | GenProp1029: radical SAM/SPASM system SynChlorMet (HMM) |