HMM Summary Page: TIGR04304

AccessionTIGR04304
NameGeoRSP_SPASM
FunctionGeoRSP system SPASM domain protein
Trusted Cutoff300.00
Domain Trusted Cutoff300.00
Noise Cutoff75.00
Domain Noise Cutoff75.00
Isology Typehypoth_equivalog
HMM Length293
AuthorHaft DH
Entry DateMar 26 2012 11:50AM
Last ModifiedAug 12 2012 6:56PM
CommentMembers of this protein family are encoded by one of two consecutive genes for SPASM domain proteins. The two are closely homologous in the SPASM domain regions, and also in a small N-terminal region, but the other family (TIGR04303) has an intact radical SAM domain (PF04055) that this "quasi-rSAM" protein lacks. A PqqD-family protein, TIGR04302, is always adjacent.
Genome PropertyGenProp1057: radical SAM/SPASM system GeoRSP (HMM)
GenProp1057: radical SAM/SPASM system GeoRSP (HMM)
GenProp1057: radical SAM/SPASM system GeoRSP (HMM)