HMM Summary Page: TIGR04330

AccessionTIGR04330
Namecas_Cpf1
FunctionCRISPR-associated protein Cpf1, subtype PREFRAN
Trusted Cutoff300.00
Domain Trusted Cutoff300.00
Noise Cutoff30.00
Domain Noise Cutoff30.00
Isology Typeequivalog
HMM Length1288
AuthorHaft DH
Entry DateMay 17 2012 11:52AM
Last ModifiedAug 12 2012 6:56PM
CommentThis family is the long protein of a novel CRISPR subtype, PREFRAN, which is most common in Prevotella and Francisella, although widely distributed. The PREFRAN type has Cas1, Cas2, and Cas4, but lacks the helicase Cas3 and endonuclease Cas3-HD.
Genome PropertyGenProp1061: CRISPR system, PreFran subtype (HMM)
GenProp1061: CRISPR system, PreFran subtype (HMM)
GenProp1061: CRISPR system, PreFran subtype (HMM)
GenProp0021: CRISPR region (HMM)
GenProp0021: CRISPR region (HMM)
GenProp0021: CRISPR region (HMM)