HMM Summary Page: TIGR04387
| Accession | TIGR04387 |
| Name | capsid_maj_N4 |
| Function | major capsid protein, N4-gp56 family |
| Trusted Cutoff | 60.00 |
| Domain Trusted Cutoff | 50.00 |
| Noise Cutoff | 30.00 |
| Domain Noise Cutoff | 30.00 |
| Isology Type | equivalog |
| HMM Length | 324 |
| Author | Haft DH |
| Entry Date | Oct 19 2012 12:14PM |
| Last Modified | Oct 19 2012 12:14PM |
| Comment | Members of this family are phage major capsid proteins as found in phage N4 (a double-stranded DNA virus) plus many additional lytic phage and integrated prophage regions. |
| References | RN [1] RM PMID:18374942 RT Insight into DNA and protein transport in double-stranded DNA viruses: the structure of bacteriophage N4. RA Choi KH, McPartland J, Kaganman I, Bowman VD, Rothman-Denes LB, Rossmann MG RL J Mol Biol. 2008 May 2;378(3):726-36. |
| Genome Property | GenProp0208: phage: major features (HMM) |