HMM Summary Page: TIGR04393
Accession | TIGR04393 |
Name | rpt_T5SS_PEPC |
Function | T5SS/PEP-CTERM-associated repeat |
Trusted Cutoff | 23.00 |
Domain Trusted Cutoff | 23.00 |
Noise Cutoff | 20.00 |
Domain Noise Cutoff | 20.00 |
Isology Type | repeat |
HMM Length | 49 |
Author | Haft DH |
Entry Date | Dec 7 2012 9:10AM |
Last Modified | Dec 7 2012 9:10AM |
Comment | This HMM describes a repeat about 50 amino acids in length, appearing sometimes more than ten times in tandem in a single protein. Most proteins with this repeat have a C-terminal autotransporter domain (TIGR01414, PF03797) and/or an N-terminal type V secretion system signal peptide (PF13018), while others instead have a C-terminal PEP-CTERM domain (TIGR02595). |