HMM Summary Page: TIGR04412

AccessionTIGR04412
NameT2SS_GspM_XcpZ
Functiontype II secretion system protein M
Gene SymbolgspM
Trusted Cutoff60.00
Domain Trusted Cutoff60.00
Noise Cutoff36.00
Domain Noise Cutoff36.00
Isology Typeequivalog
HMM Length126
AuthorHaft DH
Entry DateFeb 5 2013 3:20PM
Last ModifiedFeb 5 2013 3:20PM
CommentMembers of this family are a variant form of the type II secretion system (T2SS) protein M, GspM, as found in several species of Pseudomonas. Members, including XcpZ, are short relative to most members of Pfam family PF04612 (as of release 26.0) and are not recognized by that HMM.
Genome PropertyGenProp0053: type II secretion (HMM)
GenProp0053: type II secretion (HMM)
GenProp0053: type II secretion (HMM)