HMM Summary Page: TIGR04451

Functionlantipeptide, SCO0268 family
Trusted Cutoff40.00
Domain Trusted Cutoff40.00
Noise Cutoff25.00
Domain Noise Cutoff22.00
Isology Typeequivalog
HMM Length53
AuthorHaft DH
Entry DateJun 16 2013 7:30PM
Last ModifiedJun 16 2013 7:30PM
CommentMembers of this family are putative lantipeptide (most likely lantibiotic) precursors, about 53 amino acids long, found in a lantibiotic-type biosynthetic cluster in several species of Streptomyces (S. coelicolor, S. griseoflavus, S. ambofaciens, etc.). This family is described in AntiSMASH as Streptomyces PEQAXS motif lantipeptide precursor.
ReferencesRN [1] RM PMID:21672958 RT antiSMASH: rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genome sequences. RA Medema MH, Blin K, Cimermancic P, de Jager V, Zakrzewski P, Fischbach MA, Weber T, Takano E, Breitling R RL Nucleic Acids Res. 2011 Jul;39(Web Server issue):W339-46.