HMM Seed Alignment: TIGR00087
Download Alignment>SP|P36664|SURE_ECOLI/1-232
MRILLSNDDG....VHAPGIQTLAKALREFA...DVQVVAPDRNRSGAS....................NSLTLESSLRT
FTF..ENG...............DIAVQMGTPTDCVYLGVNALMRPR.....PDIVVSGINAGPNLG.DDVIYSGTVAAA
MEGRHLG.FPALAVSLDGH............KHYDTAAAVTCSILRALCKEPLR......TGRILNINVPDLPLD.....
.......QIKGIRVTRCGTRHPADQVIPQQDP...RGNTLYWIGP......PGG....KCDAGPGTDFAAVDEGY.VSIT
PLHVDLT
>SP|P74709|SURE_SYNY3/7-255
LNLLVSNDDG....IFSQGVRTLANTLVAAG..HEVTVVCPDRERSATG....................HGLTLHRPIRA
GIVEDVFD............PRIKAWSCSGTPADCVKFALHAVMPRY.....PDFVLSGVNHGANLG.TDVLYSGTVSAA
MEGLIEG.IPSIALSLVSFT..........ATDFQPAADFANCFVQHLWRSPLT......EPTLFSINIPAVPAE.....
.......QIAGVRLTRQGLQRYSETFEERYDP...RGKRYYWLAGERVKEIPQPDY.LRLNRRIPTDVQASQDNF.ITIT
PLQYNLT
>SP|O25584|SURE_HELPY/2-250
KKILLTNDDG....YHAKGIKALEQALEEMA...EIYVVAPKHEKSACS....................QCITITAPLRA
EKIKGKEG..............RHYRIDDGTPSDCVYLAINELFKHVC....FDLVISGINLGSNMG.EDTIYSGTVAGA
IEGTIQG.VPSIAISQILSN.....KNKNTPLSFDLAQKIIQDLVQNIFTKGYPLK....GRKLLNVNVPNCSLQ.....
.......EYQGERITPKGYRLYKKEVHKRTDP...KNESYFWLGLH.....PLEWQ.KRENEDRLSDFDAIASNH.ASIT
PLNLDLT
>SP|O27484|SURE_METTH/1-245
MKILITNDDG....VNSSGIIAARRAVEDLG...ETIIVAPATQQSGIG....................HALTLFEPVRV
SEVTLRDG..............SGAYAVSGTHTDAVIIGIFELMDEK.....PDLVISGINMGENLGKSELTTSGTIGAA
MEAAVHG.VPSLAVSLQVRRGDIKFHDGHVDVDFSLAAELTGRVASRILRRGLPE.....GVDFLNLNVPSHP.......
.......ASDEIRITRLGDRMYNVHIKKRLDP...RGRPYYWIDGD.....P......AGTDFR.VQMSTHLRLK.TPPP
SPPYHST
>SP|O29320|SURE_ARCFU/1-242
MKILLTNDDG....LYSAGLKAAYDALSELG...EVFVVAPAVQRSGVG....................RSLSIMEPIRV
SEVKVN.G..............MRVFAVDGTPTDSVIIGMYEVIGEI.....PDLAVSGINLGENLSTEAATTSGTVGAA
LEAATHG.SKTIAISLQMP..DVSKFELTSKADFSFASKVLRGIAEIVLYKGLPE.....GVDLLNVNVPAKP.......
........NGKIAVTRLARRMYRVSVEKRLDP...RGREYYWIYGE.....E......TEDAEEGTDIHALRQGY.VSIT
PLKIDLT
>OMNI|MJ0559/11-258
MEILIVNDDG....IYSPSLIALYNALKEKFSDANITIVAPTNQQSGIG....................RAISLFEPLRM
TKVKLAKD..............IVGYAVSGTPTDCVILGIYQILKKV.....PDLVISGINIGENLG.TEIMTSGTLGAA
FEAAHHG.AKSIASSLQITSDHLKFKELDIPINFEIPAKITAKIAEKYLDYDMP.......CDVLNINIPENAT......
.......LETPIEITRLARKMYTTHVEERIDP...RGRSYYWIDGY.....P......IFEEEEDTDVYVLRKKRHISIT
PLTLDTT
>SP|P73440|YE59_SYNY3/1-225
MNFLLTNDDG....IDAPGIEALYEALGKRG....VW.VAPKNQHSGCG....................HKVTTDQAIAV
EQR.GKN.................RYAVDGTPADCTRLGVVHFYPEV......DWVIAGINAGGNMG.IDSYLSGTVAAV
REAAILG.HKAIAISHWINK........PRTINWAWASHWANAVFNTLWQQDLP......PQHFWNVNLPHWQS......
.......GDPEPEVIFCEPSRDPLPVAFTIEG...SN..FFYRGEYSQR..P.........RQPGSDIDVCFSGN.IAIT
QLRV...
>SP|P38254|YBU4_YEAST/1-311
MRVLITNDDGPLSDQFSPYIRPFIQHIKRNYPEWKITVCVPHVQKSWVGKAHLAGKNLTAQFIYSKVDAEDNTFWGPFIQ
PQIRSENSKLPYVLNAEIPKDTIEWILIDGTPASCANIGLHLLSNEP.....FDLVLSGPNVGRNTSAAYITSSGTVGGA
MESVITGNTKAIAISWAYFN....GLKNVSPLLMEKASKRSLDVIKHLVKNWDP......KTDLYSINIPLVESLSDDTK
VYYAPIWENRWIPIFNGPHINLENSFAEIEDGNESSSISFNWAPKFGAHKDSIHYMDEYKDRTVLTDAEVIESEM.ISVT
PMKATFK
>SP|P30887|PHO2_YARLI/42-328
TTIVVTNDDS....WASANIRAFYDELKKEG..YNVFMFAPALQQSGTG.G.............TFVLPKNTTLAKGAEW
GSAPVGAPAWGQ......DEKDDHIWYFDGTPGAAVTFGFDYALPKFHNNITVDLVVSGPNEGWNLGPFVYTLSGTEGAM
YTSVLRG.VPAIAFSGENKHTYYANASNSETASHNIYAKASTAIVKNLLKNAKVRPSVLPYGVGLSVNLPLVGDI.....
.......DPTGKCTDPKPIFTRQTGRGAITDKLVFNETTGLFKYGDIKSDATKACLNGDCFLPDETDVINNWGCY.SSIS
VVSTDYD