HMM Seed Alignment: TIGR00097
Download Alignment>OMNI|NTL02SS0003/7-252
VATIAGSDSGGGAGLQADLKTFSALGVFGTTIITGLTAQNTRTVTKVLEIPLDFIEAQFDAVCLDLHPTHAKTGMLASGK
VVELVLRKIREYNI--KLVLDPVMVAKSGSLLVTEDISEQIKKAMK-EAIISTPNRYEAEIINK-TKINSQDDVIKAARE
IYSKYG--NVVVKG--FN------GVDYAIIDGEE-IELKGDYISTKNTHGSGDVFSASITAYLALGYKLKDALIRAKKF
ATMTVKYG--LDLGGG-YGPVDPF
>OMNI|NTL01MT00611/3-245
ALSIAGFDPSGGAGILADIKTFSALGVYGAGVITALTAQNVGRVSGIMPVPPGFVEEQLDLVMEDLPVVHAKTGMLYSAE
IVEAVAEKVREYGL--RVIVDPVMVAASGGELSEGNFVRALRRHLLPEALIVTPNVAEAERLSD-IPIGTVDDAIRAARV
IG-ELC--DVIITGGHLG------GRSVILIDGDV-EVLEGKLLDSRNTHGSGCSFSAATAAYLERGLDLGEALRMADDF
VREAIRH------GH--HGTLNQF
>OMNI|NTL01PA01076/7-259
ALTIAGSDSGGGAGIEADLKTFTAFGVHGLVAITSVTAQNTQAVTAIHDIPPDVVSEQIRAVAEDIGVDAAKTGMLSNAE
IIKAVAKTVKNYDF--PLVVDPVMIAKSGAPLLREDAVDALIKYILPLATLVTPNRFEAEKLSG-MKIRTVEDAKIAAKK
IAEETGAKAVIVKGGHIE--GEE-AIDVLYHNGSYR-LYRAPKVEGC-THGTGCSFSAAITANLAKGFGLEDAIEVAKKF
ITLGIAMG--HRIGHG-HCPVNQS
>OMNI|NTL01BH1438/7-261
ALTIAGSDSGGGAGIQADIKTFQELDTFGMSVITALTAQNTLGVHGVYPQTLDAIEAQLDAVLSDIGADAVKTGMLFSAD
IITLVAQKLTAYRVN-HIVVDPVMIAKGGAALLLDEAVEALVKKLLPIATVITPNLPEAAKILGIESIDSRTEMEQAVKE
LH-ALGPRYVVLKGGHLS--GDE-ATDLLYDGE-TIHVFSSSRFDTKHTHGTGCTFAAAIAAELAKGASVFDAVKTAKAF
ISTAIKHA--VAIGGG-IGPTNHH
>OMNI|NTL01TA01257/5-257
ALTVAGSDSGGGAGIQADLKTFNALSVFGMSVIVALTAQNSYEVSGILPVPPDFVKLQFETVAKDIKVDGSKTGMLFSSD
IISVVAREFTEFGVP-VIVVDPVMVSKSNARLLKEDAIETLKEKLLPISTMVTPNVPEAEILSG-IKIRNIEDMHSAAEK
LYDETGSH-ILIKGGHLE--SS--PIDVLYDGSSFH-EFPGSRINTKNTHGTGDTLSSAIVSYMIRGHSESESVRLAKEY
VEGAIKNS--FTTGKG-YGSLCHW
>OMNI|NTL01CA3096/7-259
ILTIAGSDCSGGAGIQADIKTITAHKMYAMSAITALTAQNTTGVYGIMEATPEFVEKQLECIFTDICPDAVKIGMVSSGE
IINVIVKKLREYKAE-NIVIDPVMVATSGSKLLSDQAMEKLITCLLPLGTLITPNIPEAEVLCG-FKIKSEQDMVRAAKK
IS-EKINVGILIKGGHLV--DN--ATDLFYKNGYIE-WFKLEKIDNPNTHGTGCTLSSAIACNLAQGISISESIKNAKEY
LTGALRAG--LDLGKG-SGPLEHT
>OMNI|NTL01CJ01026/11-263
VLTIAGSDCSGGAGIQADLKTFSAHNLFGMSVVLSVVAENTARVISVHDIPTQSVDEQMLAVFEDIVPKATKIGMIGSCE
LMSCVAKNLSEFKPQ-NIVIDPVMFAKNGYALMPQENCDFFKQTIVKFADILTPNIPEAEFLCG-FKIANEEQMIKAAKH
LC-SLGAKAVLLKGGHSE--IN--ANDVFYDGKEIY-ILKGERIETKNTHGTGCTLSSAIASNLAKGKDLFHAVSEAKEY
VRNAIYYS--LNLGKG-CGPTNHF
>SP|P76422|THID_ECOLI/6-262
ALTIAGTDPSGGAGIQADLKTFSALGAYGCSVITALVAQNTRGVQSVYRIEPDFVAAQLDSVFSDVRIDTTKIGMLAETD
IVEAVAERLQRYQIQ-NVVLDTVMLAKSGDPLLSPSAVATLRSRLLPQVSLITPNLPEAAALLDAPHARTEQEMLEQGRS
LL-AMGCGAVLMKGGHLD--DEQ-SPDWLFTREGEQ-RFTAPRIMTKNTHGTGCTLSAALAALRPRHTNWADTVQEAKSW
LSSALAQADTLEVGHG-IGPVHHF
>GP|2746079|gb|AAC31298.1/35-293
VLTVAGSDSGAGAGIQADIKVCAARGVYCASVKTAVKAKNTRAVQSVHLLPPDSVSEQLKSVLSDFEVDVVKTGMLPSPE
IVEVLLQNLSEYPVR-ALVVDPVMVSTSGHVLAGSSILSIFRERLLPLADIITPNVKEASALLGGVRIQTVAEMRSAAKS
LH-QMGPRFVLVKGGDLP--DSSDSVDVYFDGNEFH-ELHSPRIATRNTHGTGCTLASCIAAELAKGSNMLSAVKVAKRF
VDSALNYSKDIVIGSGMQGPFDHF
>OMNI|NTL01HS02001/5-255
ALTIAGSDSGGGAGIQADLKTFEAGDAFGTSAITAVTAQNTHGVTHSDILAPETVRAQIDAVTTDFDVSAVKTGMLGDAA
VVDAVATAL--AETPAPVTVDPVVVSQSGDRLLTESGIAAVRDELLPRATLATPNIPEAELLAD-TEITDETDLRAAAEA
VC-ELGPDATLLTGGHLD--GD--PVDV-FAGDTTS-AFTRPRIETPTTHGSGCTLSAAITARLAHGDALRPAVERGIDA
VAAAIDGD--LSVGGG-DGPVDHR
>SP|O85786|THID_SYNP7/6-259
ALTIAGSDSGGGAGIQADLRTFAFHQVHGTCAITCVTAQNTLGVTRVDAIAPAGVAAQLDAVLSDLPPQALKTGMLLNAE
IMEVVAGTI--APLFIPRIIDPVMVSRTGAVLIDQAAIAVLRDHLLPLATVLTPNRYEAQLLAG-MDIQDAADLDRAARI
IR-DLGPQAVLIKGGAAT--GDWHGVDWWWDGQQSH-ILKTEAIATPHTHGSGCTLAAAIAANAALGLEILAAAQAAKHY
VTKAFRHS--FAIGQG-QGPLGHF
>OMNI|EF2775/10-264
VVTIAGSDSGGGAGMQADLKTFQARQAFGLNIVIALTAQNTYGVQDSLPIPSSFIDAQFQSLAADFKIGAAKTGMLADSE
RVEAVVRNLQKVDFG-PLIVDPVMVAKGGHHLLEAEAVQTIKEQLLPLATVVTPNLPEAEVLLE-TTIKTEQEMQTAAKK
LQ-QLGTKNIIMKGGHS---TNQQAADYVLMEDGSSFWLSAPRIVTKNTHGTGDTFSACIAAELAKGTPLEAAIVIGKQF
IQGAISQA--ISVGHG-HGPTNHW
>SP|Q9ZL00|THID_HELPJ/7-263
VLSIAGSDSGGGAGIQADLKAFQTFGVFGTSVITCITAQNTQGVHGVYPLSVESVKAQILAIRDDFSIKAFKMGALCNAQ
IIECVANALETCDFG-LCVLDPVMVAKNGALLLEEEAILSLKKRLLPKTNLLTPNLPEVYALTG-VQARDDKSASKAMGV
LR-DLGVKNAVIKGGHTEHFQGEFSNDWVFLED-AEFILSAKRFNTKNTHGTGCTLSSLIVGLLAQGLDLKNAITKAKEL
LTIIIQNP--LNIGHG-HGPLNLW