HMM Seed Alignment: TIGR00167
Download Alignment>SP|P77704|YDJI_ECOLI/1-277
.MLADIRYWENDATNKHYAIAHFNVWNAEMLMGVIDAAEEAKSPVIISFGTGFVGNTS..............FEDFSHMM
VSMAQKA..TVPVITHWDHGR.............SMEIIHNAWTHGMNSLMRDASAFD.......FEENIRLTKEAVDFF
HPLGIPVEAELGHVGNETVY...........EEALAGYHYTDPD....QAAEFVERTGCDSLAVAIGNQHGVYT..SEPQ
...LNFEVVKRVRDAVS..........VPLVLHGASGISD.....................ADIKTAISLGIAKINIHTE
LCQAAMVAVK....ENQDQ....................PFLHLEREVRKAVKERALEKIKLFGSDGKA
>SP|P42908|AGAY_ECOLI/1-284
MSIISTKYLLQDAQANGYAVPAFNIHNAETIQAILEVCSEMRSPVILAGTPGTFKHIA..............LEEIYALC
SAYSTTY..NMPLALHLDHHE.............SLDDIRRKVHAGVRSAMIDGSHFP.......FAENVKLVKSVVDFC
HSQDCSVEAELGRLGGVEDDMS..........VDAESAFLTDPQ....EAKRFVELTGVDSLAVAIGTAHGLYS..KTPK
...IDFQRLAEIREVVD..........VPLVLHGASDVPD.....................EFVRRTIELGVTKVNVATE
LKIAFAGAVKAWFAENPQG..................NDPRYYMR.VGMDAMKEVVRNKINVCGSANRI
>OMNI|NTL01EC02055/3-286
MYVVSTKQMLNNAQRGGYAVPAFNIHNLETMQVVVETAANLHAPVIIAGTPGTFTHAG..............TENLLALV
SAMAKQY..HHPLAIHLDHHT.............KFDDIAQKVRSGVRSVMIDASHLP.......FAQNISRVKEVVDFC
HRFDVSVEAELGQLGGQEDDVQ..........VNEADALYTNPA....QAREFAEATGIDSLAVAIGTAHGMYA..SAPA
...LDFSRLENIRQWVN..........LPLVLHGASGLST.....................KDIQQTIKLGICKINVATE
LKNAFSQALKNYLTEHPEA..................TDPRDYLQ.SAKSAMRDVVSKVIADCGCEGRA
>SP|P13243|ALF1_BACSU/1-285
MPLVSMTEMLNTAKEKGYAVGQFNLNNLEFTQAILQAAEEEKSPVILGVSEGAGRYMGG.............FKTVVAMV
KALMEEYKVTVPVAIHLDHGS.............SFESCAKAIHAGFTSVMIDASHHP.......FEENVATTAKVVELA
HFHGVSVEAELGTVGGQED...........D.VIAEGVIYADPK....ECQELVERTGIDCLAPALGSVHGPYK..GEPN
...LGFKEMEEIGKSTG..........LPLVLHGGTGIPT.....................ADIKKSISLGTAKINVNTE
NQISSAKAVRETLAAKPDE..................YDPRKYLG.PAREAIKETVIGKMREFGSSNQA
>SP|P42420|ALF2_BACSU/1-284
MAFVSMKELLEDAKREQYAIGQFNINGLQWTKAILQAAQKEQSPVIAAASDRLVDYLGG.............FKTIAAMV
GALIEDMAITVPVVLHLDHGS.............SAERCRQAIDAGFSSVMIDGSHQP.......IDENIAMTKEVTDYA
AKHGVSVEAEVGTVGGMED.............GLVGGVRYADIT....ECERIVKETNIDALAAALGSVHGKYQ..GEPN
...LGFKEMEAISRMTD..........IPLVLHGASGIPQ.....................DQIKKAITLGHAKININTE
CMVAWTDETRRMFQENSDL..................YEPRGYLT.PGIEAVEETVRSKMREFGSAGKA
>SP|P75089|ALF_MYCPN/1-288
.MLVNIKQMLQHAKQHHYAVPHININNYEWAKAVLTAAQQAKSPIIVSTSEGALKYISG.............HQVVVPMV
KGLVDALKITVPVALHLDHG..............SYEGCKAALQAGFSSIMFDGSHLP.......FQENFTKSKELIELA
KQTNASVELEVGTLGGEED.............GIVGQGELANIE....ECKQIATLK.PDALAAGIGNIHGLYP..DNWK
G..LNYELIEAIAKATN..........LPLVLHGGSGIPE.....................ADVKKAIGLGISKLNINTE
CQLAFAKAIREYVEAKKDLDTHNKG............YDPRKLLK.SPTQAIVDCCLEKMQLCGSTNKA
>SP|P47269|ALF_MYCGE/1-288
.MLVNFKLMLQKAKLGKYAIPHININNYEWAKAVLTAANQANSPIIVSVSEGALKYMSG.............YSVVIPLV
KGLIESLSVKVPVTLHLDHG..............SYDACIQALQAGFSSVMFDGSHLP.......FEENFNKSKKLIEIA
QKTNASVELEVGTIGGEED.............GVIGQGELANVD....ECKQIASLK.PDALAAGIGNIHGIYP..KNWK
G..LNFPLIETISKITN..........LPLVLHGGSGILE.....................NDVKKAISLGICKLNINTE
CQLAFAHEIRKYIESNKDLDLNKKG............YDPRKLLK.EPTQAIVDTCLEKIDLCGSRNKA
>SP|P56109|ALF_HELPY/1-307
.MLVKGNEILLKAHKEGYGVGAFNFVNFEMLNAIFEAGNEENSPLFIQTSEGAIKYMG..............IDMAVGMV
KTMCERYP.HIPVALHLDHGT.............TFESCEKAVKAGFTSVMIDASHHA.......FEENLELTSKVVKMA
HNAGVSVEAELGRLMGIEDNIS..........VDEKDAVLVNPK....EAEQFVKESQVDYLAPAIGTSHGAFKFKGEPK
...LDFERLQEVKRLTN..........IPLVLHGASAIPDNVRKSYLDAGGDLKGSKGVPFEFLQESVKGGINKVNTDTD
LRIAFIAEVRKVANEDKSQ..................FDLRKFFS.PAQLALKNVVKERMKLLGSANKI
>OMNI|NTL01SS02214/1-329
MALVPMRLLLDHAAENGYGIPAFNVNNMEQIISIMQAADETDSPVILQASRGARSYAG..............ENFLRHLV
LGAVETYP.HIPIAMHQDHGN.............SPATCYSAIRNGFTSVMMDGSLEADAKTPASFEYNVNVTAEVVKVA
HSVGASVEGELGCLGSLETGQGEAEDGHGFEGKLDHSQLLTDPE....EAVEFVNKTQVDALAVAIGTSHGAYKFTRKPT
GEVLAISRIEEIHRLLPN.........THLVMHGSSSVPQEWIDMINEFGGAIPETYGVPVEEIQKGIKSGVRKVNIDTD
NRLAITAAFREAAAKDPKN..................FDPRHFLK.PSIKYMKQVCADRYQQFWTAGNA
>OMNI|NTL01EC02860/13-359
ITGDDVQKVFQVAKENNFALPAVNCVGTDSINAVLETAAKVKAPVIVQFSNGGASFIAGKGVKSDVPQGAAILGAISGAH
HVHQMAEHYGVPVILHTDHCAKKLLPWIDGLLDAGEKHFAATGKPLFSSHMIDLSEES.......LQENIEICSKYLERM
SKIGMTLEIELGCTGGEEDGVD........NSHMDASALYTQPEDVDYAYTELSKISPRFTIAASFGNVHGVYK..PGNV
V..LTPTILRDSQEYVS.KKHNLPHNSLNFVFHGGSGSTA.....................QEIKDSVSYGVVKMNIDTD
TQWATWEGVLNYYKANEAYLQGQLGNPKGEDQPNKKYYDPRVWLR.AGQTSMIARLEKAFQELNAIDVL
>SP|P44429|ALF_HAEIN/13-359
VTGEDVQKVFAYAKEHNFAIPAVNCVGSDSVNAVLETAARVKAPVIIQFSNGGAAFYAGKGIKPTSGTRPDVLGAIAGAK
QVHTLAKEYGVPVILHTDHAAKKLLPWIDGLLDAGEKHFAETGRPLFSSHMIDLSEES.......MEENMAICREYLARM
DKMGMTLEIEIGITGGEEDGVD........NSDVDESRLYTQPSDVLYVYDQLHPVSPNFTVAAAFGNVHGVYK..PGNV
K..LKPSILGESQEFVS.KERNLPAKPINFVFHGGSGSSR.....................EEIREAIGYGAIKMNIDTD
TQWASWNGILNFYKANEAYLQGQLGNPEGPDAPNKKYYDPRVWLR.KMEESMSKRLEQSFEDLNCVDVL
>SP|O51401|ALF_BORBU/12-359
VYGKELHFLYEICKKEGFAIPSINCIGTNSINAVLEAAKEINSPIMIQFSNSGSAFISGKGLKMEKPQGVSIVGAISGAM
HVHLMAEHYGVPVVLHTDHCAKNLLPWVEGLLEYGEKYYSQHKKPLFSSHMLDLSEEP.......IKENIEISKKFLERM
AKIEMFLEIELGITGGEEDGVD........NSDRALHELFSTPEDIYYGYSELLKVSPNFQIAAAFGNVHGVYK..PGNV
K..LTPKVLKDGQDYVISKTGVNMAKPVSYVFHGGSGSTI.....................DEINEALSYGVVKMNIDTD
TQWAAWEGVLNYYKKNESRLQGQLGDGKDIDIPNKKFYDPRVWLR.EAEVSMKDRVKIACKNLNNINRN
>GP|3696|emb|CAA33111.1/14-359
IVGEDVHNLFTYAKEHKFAIPAINVTSSSTAVAALEAARDSKSPIILQTSNGGAAYFAGKGISNE.GQNASIKGAIAAAH
YIRSIAPAYGIPVVLHSDHCAKKLLPWFDGMLEADEAYFKEHGEPLFSSHMLDLSEET.......DEENISTCVKYFKRM
AAMDQWLEMEIGITGGEEDGVN........NENADKEDLYTKPEQVYNVYKALHPISPNFSIAAAFGNCHGLY...AGDI
A..LRPEILAEHQKYTREQVGCKEEKPLFLVFHGGSGSTV.....................QEFHTGIDNGVVKVNLDTD
CQYAYLTGIRDYVLNKKDYIMSPVGNPEGPEKPNKKFFDPRVWVR.EGEKTMGAKITKSLETFRTTNTL