HMM Seed Alignment: TIGR00328
Download Alignment>SP|P76299|FLHB_ECOLI/7-353
-DKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGG-VSLARRLSGMLSAGLHFDHSIINDPNLILGQIILL
IREAMLALLPLISGVVLVALISPVML-GGLVFSGKSLQPKFSKLNP--LPGIKR-MFSAQTGAELLKAILKTILVGSVTG
FFLWHHWPQMMRLMAESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK
GRIRQMQRAAAR-----RRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAENNVPTLEAP
PLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWR
>OMNI|VC2120/7-354
QERTEEATPRRLQQAKEKGQVARSKELASVSVLVVGAVSLMWFG-EILAKGLMVAMQRLFELSREEIFDLGKLFDIIGGS
LVNLLLPLLMILSTLFIAALIGAAGV-GGISFSAEAAMPKLSKMNP--LSGLKR-MFGMQSWVELLKSILKVLLVSGVAF
YLIEASQKDLFQLSLDVYPQNIFHALDILLNFVLLISCSLLVVVAIDIPFQIWQHAEQLKMTKQEVKDEYKDTEGKPEVK
GRIRMLQREAAQ-----RRMMAALPQADVIITNPEHFSVALRYKQNTDKAPVVIAKGVDHMALKIREIAREYDIAIVPAP
PLARALYHTTELEQQIPDGLFVAVAQVLAFVFQLKQYR
>GP|6969591|gb|AAF33828.1/8-355
GERTELPTEKRLREAREQGNIPQSRELSTAAVFGAGVFALMALA-RGIGDGATAWMKTALSPDPTMRENPMALFGHFGDL
LLQLLWVMLPLIGICLAAGLAGPLLM-SGLHFSGKAIMPDLTKLNP--ANGLKR-MWGSNSLAELVKSVLRLLFVGLAAS
FCISKSLPGLRSLVSQPLEQAVGNGLDFTKSLLFYTAGALVLLAAIDAPYQKWNWMRKLKMTREEIKREMKESEGSPEVK
GRIRQMQMQMSQ-----RQMMEAVPKADVVLMNPTHYAVALKYEGGKMRAPIVVAKGVDEMAFRIREAGEQHRVAIVTAP
PLARALYREAQVGKEIPVRLYSVVAQVLSYVYQLRGWN
>OMNI|NTL01BA00231/7-354
EEKTEHPTEHRIRKFRKKGKTRYSRELSSLFILLVGFINLWWYR-DLIVLNFSKIMSDSFLFESNDFLNNNNNLLKILMS
LKEILFSFFPFLISLLIVIIIPPILF-SGISLNFRSLTLNFSKLNP--FHGFKR-LFSFQIIVEFFKIILKLFIVSIISF
WYLQFSFSEILFLVNANYVSSLSHGYNIIFSCCFLVILGLFPIVFFDIAWQQFNYYKKLKMTRQEMRDELKEKEGNPNIK
MRIRQAMKAVMR-----RRMIINTPKADVIITNPIHYSVALKYDEKNMNAPKVIAKGIGEAAIKIQNLALKHNISIISVP
SLARSLYRYSEIGQYIPGPLYKAVAEVLAWVWKVRKWK
>OMNI|NT01MC2937/7-354
DSKTEEPTSKRLSDSRNKGQVVSSKEVPTALLMLAALAVFLVQG-NELWQALQRKMHFFLSGQISDDITPTGVSLIFNEI
IRAVVMDLAPFFALFLVVAIISGLIQ-HGWLITFEPLMPKFSKVNP--LQGLKR-LFSVRSLVEAFKSIVKIFVISFAVY
LAMRNNIDQILGLADTTITEFTTLMFKDSLEILWRVTLAFLLIAVLDFIYQKFDYIKGLRMSKQEIKDEMKQMEGDPLLK
GRIRQIQRELAQ-----SRMMQEVPKADVIITNPTHYACALQYTPGQMSAPKLVAKGKGLIAARIRELADENNIPRVENP
PLARTLYRDVELEQFIPPELFKAVAEVLAYVFSLKNRR
>OMNI|NTL01BH2442/14-362
QEKTEKATPKKRQDSRKKGQVAKSTDVNTAIILLCVFLFLWLFGGPLLGGTLEKLLIHTFESYLLMDVTEESVAELMFEI
TMEAAIVLLPIMAIALIAGVLASYIQ-VGPLFTTEPLKMKLSKIDP--IKGAKR-IFSVRALVEFLKSLLKIVLTGLAAF
SIVWFSLEDVMLLSQKSVENSFVTVAQLTALLGILIAILLLILSIPDYLYQRYDHEKQIRMSKQDVKDEHKNVEGDPKVK
SKRKQKQMEMAM-----QRMMQEVPKADVVITNPTHYAIALKYDQSKMDAPVIVAKGVDYVAFKIKSLAKQHNVVTVENK
PLARALYDQADIGDQVPEQLFKAVAEVLAYVYRLKKKQ
>OMNI|NTL01CJ00311/6-352
QEKTEEPTSKKIEDARKEGNVPKSQDAAAIVTLIIGVTITLFMM-SFMGERIVNLYRYYQS-FIGVEFDLRIIQAIMIKS
IFEVLIILAPIVLSIMIAGVLGNIMQ-FGFIFTTKPIMPNLGKINP--LKGLKN-LFSLKKIVESIKIILKVGIVFTIAF
IVLLKFMQELPRVELYTMVAQLTWLRDRAIVLAAIVIVAFLIIAVLDVFLVRFQYFKGLRMSKQEIKDEYKQMEGDPQVK
GRIRRLQMEAAR-----RRMVQDVAGADVVITNPTHYAVAIRYDTGKEQAPRVVAKGVDFLALRIKQVAYENNVVVYENP
PLARELYKACDVNDLIPREMFKAVAEVLGFVYNTNNKS
>SP|P56416|FLHB_HELPY/4-349
EEKTELPSAKKIQKAREEGNVPKSMEVVGVLGLLAGLISIFVFF-IWWVDGFSEMYRHVLK-DFSLDFSKESVQELFNQL
AKDTFLLLLPILIILVVVAFLSNVLQ-FGWLFAPKVIEPKFSKINP--INGVKN-LFSLKKLLDGSLITLKVFLAFFLGF
FIFSLFLGELNHAALLNLQGQLLWFKNKALWLISSLLFLFFVLAFIDLAIKRRQYTNSLKMTKQEVKDEYKQQEGNPEIK
AKIRQMMLKNAT-----NKMMQEIPKANVVVTNPTHYAVALKFDEEH-PVPVVVAKGTDYLAIRIKGIAREHDIEIIENK
TLARELYRDVKLNAAIPEELFEAVAIVFAQVAKLEQER
>OMNI|TM0909/31-373
AERTERATPRKRRRVREEGRAPVSRELNMAVTFLVFALALKIFGYQGVERITEDVQVFLSFEETEDLLMN------AVNI
FKDVLLIVGAFVVFSMVAGVMIGALQ-TRFLFAPKALKPDLNRINP--IEGFKR-LFSLRSLVELLKSVLKVAIVGIVVY
QVLKNRWDEMILLTEMSVNDAFANFWDITSEITLKSGMILLALAVFDYFYQRWEFEKSIRMTKQEVKDELKEVEGNPEIK
RRQRQMMYDILR-----RRMLEEVPKADVVITNPTHFAVALKYDPDTMNAPVVVAKGVDHLAFKIIEIAKENDVPVLRNP
SLARALYYKTEIGEEIPVEFYRIVAEVLVYVYAKKGVR
>SP|O67813|FLHB_AQUAE/4-347
EHKTERATPYKRRKVREEGNVAKSHEIASSLVVLLSLLLLLFLG-TYIAKEVILIFLAVTGYVHADISELGSLYENFYEN
IVKV---LTPLFFLALLVVILSHVAQ-FGFIFTLKPLSFKWERINP--FEGIKR-LISLTTLFETVKNTLKAFLLIGIAV
FVLKGSLYFFLSSSTYPLAETLKSFIKTSAITLITLGVVALLIAFLDYAFKRWQYEKKIMMSRRELKEEYKQLEGHPEVK
SRIKARMRELAK-----SRMMAEVPKATVVITNPTHIAIALKYNPEKDKAPVVVAKGKGTIAQKIVEIAENYSIPVVRKP
ELARALYPAVEVGKEISPKFYKAVAEIIAYVMFKKKK-
>GP|3435112|gb|AAC32325.1/8-358
QEKTEEPTQKRREQAREDGSIVTSKEVFVFATLAGG-LALLMMI-EGLLPALVRGWSGYLVIEPGADLERIAMVR-LGQA
WREVLIAGLVVSVPLLALVLLVQSAM-GGINFSTKALSFKASRINP--AAGLKR-MVSLKALVELAKAVAKVALLIGVAV
LVLRDELSPLDRLWTAAPGDAAAVLGAGLIRLVSALLIVLAVIGGLDLVWQAWSLTNSMKMSRQELKEESKESNGSPEVK
GRMRRMQMEASRNGARRRAALDDVPQATAIVTNPTHFAVALRYVPGETPAPVILAMGKGPMALDIIERGRKAGVGTVRIP
LLARALYFTGDIGQEIPDGLDGAVAVVLAHVYRLDRGE
>SP|O54243|FLHB_RHIME/8-356
DSKTEAPSEKKISDATEKGNVPFSREVTAFASTLAIYIFVVFFLSDGAANMAEALKDIFEQPEAWRLDTATDAVALISHV
VLKCAALVLPVSILLILFGVGSSIFQ-NLPRPVLDRIQPKWNRVSP--AAGFKR-IYGVQGLVEFGKSLFKIIVVSIVVV
LVLWNDYFATLDMMFSDPVTIFTTMISDLQQIIIVVLFATATLAIVDLFWTRHHWYTELRMTRQEVKDELKQSQGDPIVK
SRLRSMQRDRAR-----KRMISSVPRATLIIANPTHYAVALRYVREESDAPVVVAMGKDLVALKIREIAEKNGIPVFEDP
PLARSMFAQVSVDSVIPPVFYKAVAELIHRVYAAQPQQ
>OMNI|CC1077/8-355
ESKTEEPSAKKLSDARAKGDVIKSADIPQLASLAGAVSVILLAGGWLTRDLMAALTPFIAHAGTIDLSSG-GAMIVLKQA
LLAALPALVLVMVVTAFAGAAAHIAQ-TGFLLTPEKIKPDFQKLDL--IKGLGR-IFGPDGMVQFLKSAVKFLLTGVIAY
FVLKPHVGEVRNLVGMDPAAMIPEAMKLSKGLLIAVILLLVATSAFDYFWQRMRFMNRMRMTLQEVKEEFKQSDGDPHIK
GKRRQIQMQRSR-----QRMMQAVPKATVVVMNPTHYAVALKYEQGETPAPLCVAKGVDDLALKIRAVAEEHGVPVLEDP
PLARALYASVEIDEEIPVEHFEAVAKVISFILNGKKPQ
>OMNI|NTL01CA2149/262-609
SDKTEEATPKRKSEARKKGQVARSKEVPLAATLVAITFIISLGGQTFFNGLGVMMQTFFQSYIHSNLTEL-DLRRIIIFV
ILNAGKFIFMFGVPVMVVGIVANIAQ-TGWITTTEPIKPDLKKLNP--ISGFKR-IFSMTTIVNLLKDLVVVAVLSVVGY
KFLMSNYGDIANLNNLMVQYIPQAYLSYVISIFRIVALIMIVIAGFDFVYNRYKYKKDMKMTKHEVKEEFKQAEGDPEIK
GKRRQRMREIVT-----RTMLSKVPDATVVITNPTHISVAIKYERGVDKAPTVVAKGADRTALRIKEIAKENNVPIMENK
PLARLIFKKVEVDEQIPAEMYQTVAEILALVYKLNKKQ
>SP|O83710|FLHB_TREPA/25-371
EGRSEDPTETKLRKAREEGRVPKSQDLNGAFVMLFTSTSLFLLAPFILRECIGVLRFFFTRATTASIQNT----GWFFVF
VRYFMKLALPISFVALVSGVAANIVQNKTVLFSVKSIRPQFKKISPDVIRFFKRSFFSTEGLFNLLKSLIKITAIFFVSY
FTIRNDLFMFVSLLGVSLTQSIFYITSLAGKVLLEVSLLLVVFSLPDYFFQRRQFIDSLKMSRQEVKEELKEQEGDPLVR
SYVRKQMQSLVR-----ES-ARNTTDADVVITNPTHFAVAVQYEPAYMTAPTVVAKGSDGTAYRIKRLAKEAGILIEENK
PLARALYTQVAIGREVPYEYFNALVLIFTKLDKFKTH-
>SP|Q44760|FLHB_BORBU/23-370
EGRTELPTDQKKQKAREEGRVLKSTEINTAVSLLLLFALFFFMLSYFALDLIAVFKEQAIKLPEVMRMSVY---TMGFAY
IRSIMGYVVLFFFASLAVNFFVNIIQ-VGFFITFKSLEPRWDKISFNFSRWAKNSFFSAGAFFNLFKSLLKVVIICLIYY
FIIENNIGKISKLSEYTLQSGISIVLVIAYKICFFSVMFLAIVGVFDYLFQRSQYIESLKMTKEEVKQERKEMEGDPLLR
SRIKERMRVILS-----TNLRVAIPQADVVITNPEHFAVAIKWDSETMLAPKVLAKGQDEIALTIKKIARENNVPLMENK
LLARALYANVKVNEEIPREYWEIVSKILVRVYSITKK-