HMM Seed Alignment: TIGR00367
Download Alignment>SP|P45394|YRBG_ECOLI/2-312
L..LATALLIVGLLLVVYSADRLVFAASILCRTFGIPPLIIGMTVVSIGTSLPEVIVSLAASLHEQRDLAVGTALGSNII
NILLILGLAALVR.PFTVHSDV.LRRELPLMLLVSVVAGSVLYDGQ........LSRSDGIFLLFLAVLWLLFIVKLARQ
AERQGT..........................................................................
.DSLTRE..................QLAELPR................................................
..........................DGGLPVAFLWLGIA.........................LIIMPVATRMVVDNA
TVLAN.YFAISELTMGLTAIAIGTSLPELATAIAGVRKGENDIAVGNIIGANIFNIVIVLGLPALITP..GEIDPLAYSR
DYSVMLLVSIIFALLCWRRSPQPGRG.....VGVLLTGGFIVW
>OMNI|NTL01SS00384/67-382
MTWLTIPFLILGLGILVAGAEILVKGASRIALMAGLSPLIIGLTIVAYGTSMPEMVVSLQAAIAGQADISIGNVVGSNIF
NVLLILGVCSIIT.PLIVAQQL.IRLDIPILIGVSGLLLMFGWDGQ........ISRVDGVILASGAILYTTFLIRQSK.
..KENN..........................................................................
.PDVTEE..................YLKEFGEPV..............................................
.......................PKTGKQIFIQIAYVVGG.........................VALLVLGSSLLVKSS
VAIAK.SLGISELVIGLTLIAAGTSLPELATSVVASYRGERDIAVGNVVGSNIFNILAVLGFAAIFSPNGIQVSNSAFNF
DIPVMFAVALVCLPVFIT.GRLIDRW.....EGFLFLFYYIAY
>SP|Q57556|Y091_METJA/2-295
L.ILGVGYFLLGLILLYYGSDWFVLGSERIARHFNVSNFVIGATVMAIGTSLPEILTSAYASYMHAPGISIGNAIGSCIC
NIGLVLGLSAIIS.PIIVDKN..LQKNILVYLLFVIFAAVIGIDG.........FSWIDGVVLLILFIIYLRWTVKNGS.
................................................................................
..AEIEE..................NNDKNN.................................................
...........................PSVVFSLVLLIIG.........................LIGVLVGAELFVDGA
KKIAL.ALDISDKVIGFTLVAFGTSLPELMVSLAAAKRNLGGMVLGNVIGSNIADIGGALAVGSLFMH......LPAENV
QMAVLVIMSLLLYLFAKY..SKIGRW.....QGILFLALYIIA
>OMNI|BB0164/13-329
L..IQFFYVGFGIFLLYLGGNLLLKSSVGIATYLKVPTLLIGVTIVSFSTSAPELFTSLVAAFKGKNEIVVSNVIGSNII
NMLLALPLAGFFL.KIKADFKR.LKLSFMFLFLLMFLLLLLSFDFRSYSFFVTPYNRFSSFSILILFLSYLLLFYKEEK.
.EYASL..........................................................................
.ENSFQE..................GASNLNQS...............................................
..........................FNFIFFNLLSFAIS.........................MYFLYLGSKLLVDGA
LYIANNVFNVSEKLIGIILVAFGTSVPELVVSLFAIIRKESDIAFGNIIGSNIFNIGFILASSSFFRP...ILLQDIYIL
DFSIMVFITLVLFLVVKF.KGVFGRG.....ISLIFLLLYFLY
>OMNI|NTL01MT01135/18-321
L..ILIVGLVASLILVIKSADLFVDNLVDLGSSLGISEVILGVTASAIGTSLPEFGSALIASLSGSTDIGVGCVIGSNIW
NIAGILGISSVVAGIIETNADG.LKRDFSATLVTGLILLFFMFFGN........IGKIAALVMVLTYAVYLWRLIKAQK.
................................................................................
..TYSDE..................NSGKNER................................................
..........................EPLDLKKLALTVVG.........................FAGLVIGCRILVYTG
VELAD.IAGIPAMIMGLFTLAIGTSIPELVVTLSSAVKGLHELSIGTVLGSNTFNILVGIGVPALIAP..VPVERLSLTF
DAPVMILVTVLLVLLIRQGDMKLKRT.....GGIVLLAVYISY
>OMNI|NTL01MT01053/13-313
I..ILLFLFTVSLIGVIKSADIFVDRIVDIGRALGISQIILGVTVAAAGTSLPEFGSALISVLTGNPDLGVGVVIGSNIW
NIAGIIGISAILSCAVTTNRDE.IRRDGLFGLLSILILTFFMLMGP........VGPLTGVVLLALYGVYLWVLIKKQR.
................................................................................
..GYYTS..................HLMDHG.................................................
...........................EVDAKTIISAILG.........................FTGLVVFCRILVYSA
VGIAE.IMNVPEMIIGLFALAIGTSLAELVVAVNSAMKRMCSLSLGTVLGSNIFNILIGIGVPSLFVR..IPVEPLSLIL
DAPVLMGVTVAVMYFMWT.DMELRRV.....EGVALVAFYLAY
>SP|O54701|NKX2_RAT/136-652
IILHVIGMIYMFIALAIVCDEFFVPSLTVITEKLGISDDVAGATFMAAGGSAPELFTSLIGVFIAHSNVGIGTIVGSAVF
NILFVIGMCALFSREILNLTWWPLFRDVSFYIVDLIMLIIFFLDNV.....IMWWESLLLLTAYFAYVVFMKFNVQVERW
VKQMINRNKVVKVTVSEAQAKASTAGDKEEPTLPNKPRLQRGGSSASLHNSLMRNSIFQLMIHTLDPLAEELGSYGKLKY
YDTMTEEGRFREKASILHKIAKKKCQVDENERQNGAANHVDYAAEKIELPNSTSTEVEMTPSSEASEPVQNGNLSHSIEA
ADAPQATETAEEDDDQPLSLSWPSNTRKQITFLIVLPIVFPLWITLPDVRKPASKKFFPITFFGSITWIAVFSYLMVWWA
HQVGE.TIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDITVGLPLPWLLYTIIHRFKPVTVSS
NGLFCAIVLLFIMLIFVILSIALCKWRMNKILGFIMFGLYFAF