HMM Seed Alignment: TIGR00456
Download Alignment>SP|P56128|SYR_HELPY/1-537
MHTLIKGILEEILEEE.............VIVEYPKDREHGHYATPIAFNLAKVFKKSPLAIAEELALKISTHEKTQGLF
DSVVACKGYINFTLSL.DFLERFTQKALELKEKFGSQVKSERSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAKIARFL
GHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKESVTYPEVFYKGEYIIEIAKKANNDLEP.....SLLKENEETIIEV
LSGY............ARDL..MLLEIKDNLDALGIHFDSYASEKEVFKHKD..AVFEQLEKANALYEKD.SKIWLKSSL
YQDE......SDRVLIKEDKSYTYLAGDIVYHDEKFKQ.DYTKYINIWGADHHGYIARVKASLEFLG..YDSNKLEVLLA
QMVRLLK..............DNEPYKMSKRAGNFILIK..............DVVDDVGKDALRFIFLSKRLDTHLEFD
VNTLKKQDSSNPIYYIHYANSRIHTMLE.KSPFSKEEVLQTPLTNL..NAEEKYLLFSALSLPKAIESSFEEYGLQKMCE
YAKTLASEFHRFYNAGKILDTP....KAKELLKICLIVSLSLSNAFKLLGIEIKTKI
>SP|P46906|SYR_BACSU/7-556
MKDVLKEEIKAAVLKAGLA...EESQIPNVVLETPKDKTHGDYSTNMAMQLARVAKKAPRQIAEEIVAHFDKGKASIEKL
DIAGP..GFINFYMNN.QYLTKLIPSVLEAGEAYGETNIGN.GERVQVEFVSANPTGDLHLGHARGAAVGDSLCNVLSKA
GYDVSREYYINDAGNQINNLALSVEVRYFEALGLE.KPMPEDGYRGEDIIAIGKRLAEEYG.............DRFVNE
EESE....R..LAFFREYGLKYELEKLRKDLENFRVPFDVWYSETSLYQNGKIDKALEALR.EKGHVYEEDGATWFRSTT
FGDD......KDRVLIKKDGTYTYLLPDIAYHKDKLDR.GFDKLINVWGADHHGYIPRMKAAIEALG..YEKGTLEVEII
QLVHLYK..............NGEKMKMSKRTGKAVTMR..............DLIEEVGLDAVRYFFAMRSADTHMDFD
LDLAVSTSNENPVYYAQYAHARICSMLR.QGEEQGLKPAADLDFSHIQSEKEYDLLKTIGGFPEAVAEAAEKRIPHRVTN
YIYDLASALHSFYNAEKVIDPENE.EKSRARLALMKATQITLNNALQLIGVSAPEKM
>SP|P75222|SYR_MYCPN/4-537
INTDLQECLNALNLEFDEH...KE.....LVKLVK.NNSFSGFASTVVFHLKGVNQKETAQQIAAWLLKHKKA.HYRRVF
VANNN...FINFEISPQKYLDFLKTKPT.....FAPKPTK.....VLIEWVSANPTGELHLGHVRNAFFGHVLNNLMVFL
GFQTVREYWVNDYGQQARVFGFSVYQALHLQQNIK.VTPHPDGYEGE.LVDSIAKTITGIP.......LDKLSFEEFLQQ
PFLD.........QLLADCTAKVLEVIKQDLATIHIHFDSWKFESQVVKETDYKKLLTQFK.DEAHYEKD.GAIWLKTTL
YGDD......KDRVLVRQDNRPSYFGTDVAYHLDKAAR.GFDLLYDIWGSDHEGHIKRMHCVYEGLK.IHQKCQLKITAL
QLVMLYK..............NKEIVRLSKRAGNVITIK.........Q.....MLQMLSEDAARWFMLSQTNNSIIKID
LDTANLQNSSNPVYYVQYAYARMCSVLK.VVDQAALAQVNDCSLLT..HEKEIALLDQLVYFKSLLEKVQVSHELHLLTN
YLYETATLFHSWYKACKINDPAQY.NLTQQRLLLLQSLHHVFGQLLQILNITAPQQM
>SP|P47618|SYR_MYCGE/4-537
IINDLKECISALKLKFDDQ...KE.....LVKLVK.NNSFNGFSSTIIFQLKSENHKKIADSIVEWFLKNKKD.NYQNVF
IANNN...FINFQISYQKYLEYLIKTPC.....FTKKNIK.....ILIESVSANPTGRIHLGHVRIAFFGDVLNNLAKLL
GYTTVCEYWVNDYGQQARVFSFSVYQSLQLKKNIA.IQQHPDGYSGI.VIDKIASEIENFP.......VDNLNFEEFCKT
SFLD.........HFLVNCTQKVLSLIKSDLNKIHVFIDSWKFESEIVKKTNFNDLLEQLK.PNSYFYQD.NALWLKTTL
YGDD......KDRVLIRSDKRASYFGTDVAYHLEKLQR.GFDILFNVWGTDHEGHIKRMYCAFDALK.NTTKTSLKIFAL
QLVTLYK..............NKELVRLSKRAGNVITIE.........T.....MLSMISEDAARWFMLSQNNGTIIKID
LDIANLQNSANPVYYVQYAFARMNSILR.IANSDQLKEITDCSLLI..NEKEISLLNQLVYYPFMLQKAMETGELHLLTN
FLYETASLFHSWYKVCKINDDKNS.LLSAQRLALLRSLQFIVKQILDVLKISTPQQM
>SP|O27496|SYR_METTH/5-560
IEKEARDSITAALEKLGIK...VPPEI..KLEEPP.NPQLGDLASTVSFELAGKLRRAPIEITADIMSVIETP.EIFETI
ESKGP...YINFFVDYGRFSSRLLESIQ...DDYGSHPPR..DERVILEHTSANPNGPLHIGHIRNAIIGDSLARILRMA
GYDVETQYYVNDMGRQIAMIVWGLLNLDGDLEDYP.GDKMDHRVGKL.YFEVNQRLKENPG.......IRDEVDELIRKY
EAGE..NEE.....LFRKVVEYCLSGMEETMKRLHVHHDRFVWEGQFVRDGTVDRVIESLR.KTGYTGEN.DVLYLDLEE
FG.L.....EKELVLTRSDGTSLYSTRDIAYHLQKSE..EGDVIIDVLGSDHKLAAEQVGIAVELLG..GKRPEVIFYEF
ITLPEGS...MSTRRGVFISVDELMDEAHSRALHEVKKRR.DLPDDVAD....DIAESIGNGAIRYYIARLSPEKHIVFR
WD.DALSFER.GCASIQYAHARACKLLE.KASFTGEEDIEDG.WKP..EGDERELVRLLARFPVVVEESALARRVHPVAQ
YAQDLANTFNSFYRSTPVIGS....DFEGARLRLVDSVRKTLRNALNLLGIHAPETM
>SP|Q57689|SYR_METJA/3-566
IKSNIINALKEVISKE.IC...KEIDI..KLDKTP.NLELGDYSVNICFRLAKELKKNPKIIAEELVDKLKAM.NIEGVK
EIKAVN.GYINFYIDYNKFAKNLMEEIDKKGNNYGRGDKK..SIKIILEHTSANPNGPLHIGHLRNAIIGDCLKRILEFY
GYDVETHYYVNDMGRQMALVVYGIELFGLDKE.....KKKDHAIAET.YVKINKYLEEHPE.......EEEKILELMRKY
EDALENNEDNEITKKFEFAVNYALDGIKETLKNLNIKHDTFVWESSYVRNGMVKKVIEKLM.ETGKVIKE.ETYMLDLSD
FG.I.....EKKMVLARANGTSLYSTRDIAYHLDKLS..KCDIGIDVLGADHKLTAEMVKAALKLLG..SKVPEVIFYEF
ISLPEGS...MSTRRGRFISTDELLEEAIKRAKEECNKR......GVEE....NIAYDIGLGAVRYNIARISPEKPMVFR
WE.EALDFEKVGCPFIQYAHARCCSILK.EAENKGVKDEAVFNYEL..TSEEKELIKMLDEFKDIIKESAESRRVHILAN
YLLELAKAFNRFYANCPILMTKVDDDVKKSRLKLVKSTKTVLETGLELLGINCPGRM
>SP|O29368|SYR_ARCFU/5-549
FIEEVIKALGEYGDKK.............FLRES....EHADLASTIAFKLAKERKKSPKEIADEIVENLEVESEYIGSV
ESVNG...YINFFASY.EFLEDTVNVILDEDENYGHLNLK..G.EILIEHTSANPDGPLHIGHIRNSIIGDTIARIFAKA
GFDVKTHYYVNDMGRQTAITVLGIEKFGLKDK......KPDHAVAEA.YIEANKLLESNPE.......LEEQVEKLMLAY
EEGD...EK..TVEKFRRAVETALEGIKQTLKTINVEHDEFVWESEFVRNGYVGKVLGILE.ERGLVKKN.GAWTIELEG
F........DKEVVLRRENGTTLYITRDLAYHMWKNE..NYERFINVLGADHKLYGAQLSKILELLG..LKPPEIIFFEF
VSLPEGS...MSTRRGKFISADELISKVRDEAWKILSER..DMEEDEKR....KIADAVAVGAIRFDFIKIAPEKHMTFD
WS.KALDFERQTASYIQYSHARACSILR.KAVEDGMPELEFKGELC..TAGERKLVMLLSKMPYVVKRIVSELRPNVFAE
YLLSVAGTFNDFYRDHPVLKAES..EVRMHRLAIVDATRVVLRNGLELLGIEPLERM
>SP|O51540|SYR_BORBU/11-591
VKKKIKDEINVIVTNLALSNNIKLDNININIQKPP.KSDLGD.ISILMFEIGKTLKLPIEIISEEIIKNLKTK....YEI
KAVGP...YLNIKISRKEYINNTIQMVNTQKDTYGTSKYLD.NKKIILEFSSPNTNKPLHVGHLRNDVIGESLSRILKAV
GAKITKINLINDRGVHICKSMLAYKKFGNGITPEKAFKKGDHLIGDF.YVKYNKYSQENEN.......AEKEIQDLLLLW
EQKD...VS..TIELWKKLNKWAIEGIKETYEITNTSFDKIYLESEIFKIGKN.VVLEGLEKGFCYKRED.GAICIDLPS
DSDEKADTKVKQKVLIRSNGTSIYLTQDLGNIAVRTKEFNFEEMIYVVGSEQIQHFKSLFFVAEKLG.LSKNKKLIHLSH
GMVNLVDG.KMKSREGNVIDADNLISNLIELIIPEMTQKIENKE..SAK....KNALNIALGAIHYYLLKSAIHKDIVFN
KK.ESLSFTGNSGPYIQYVGARINSILEKYKALSIPVMEKIDFELLK.HEKEWEIIKIISELEENIINAAKDLNPSILTS
YSYSLAKHFSTYYQEVKVIDTNNI.NLTAARIEFLKAILQTIKNCMYLLNIPYMLKM
>SP|Q55486|SYR_SYNY3/4-584
ILTQLNDHFAQALEGQFPS...DVTLPTPLVVPAS.NPKFGDFQCNIALPLAKQLGQPPRAIAMEIVDKVNLS.EICEPL
TIAGP..GFINIKLLPDYLGEQLIKLQQNQQ..LGVSLVKG.EERIVVDFSSPNIAKEMHVGHLRSTIIGDCLARVLEFR
GYDVLRLNHVGDWGTQFGMLITYLKEVYPEALVTA.DALDIGDLVTF.YKQAKQRFDQDEQ.......FRETSRQAVVAL
QAGD...AK..SIKAWQLLCEQSRREFQLIYDCLDITIEER...GESFYNPFLPGVVELLQ.EKDLLVEDNGAQCVFLDG
FTNK..DGDRLPLIVQKSDGGYNYATTDLAALNYRLNTDGAEKIIYVTDAGQANHFAQFFQVAEKAGILTDPTQVVHVPF
GLVKGEDGKKLKTRAGDTIRLKDLLTEAVTRARQDLETRLTAEERSETEEFKTEVAQRVGIGAVKYADLSQNRTSDYVFS
FD.KMLALQGNTAPYMLYAYARIQSISR.EGGIDFAQMDSGEIVLT..EPTELVLAKNLLQFADVIETVEISLLPNRLCD
YLYELSKVFNRFYENCPVLKASDP..QRGSRLLLCDLTARTLKLGLSLLGIPVLDRM
>SP|P11875|SYR_ECOLI/3-577
IQALLSEKVRQAMIAAGAP...ADCEP..QVRQSA.KVQFGDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLN.GIASKV
EIAGP..GFINIFLDPAFLAEHVQQALASDR..LGVATPE..KQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFL
GHKVIRANHVGDWGTQFGMLIAWLEKQQQE...NA.GEMELADLEGF.YRDAKKHYDEDEE.......FAERARNYVVKL
QSGD...EY..FREMWRKLVDITMTQNQITYDRLNVTLTRDDVMGESLYNPMLPGIVADLK.AKGLAVESEGATVVFLDE
FKNK..EGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMF
GMMLGKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKNPDMPADELE....KLANAVGIGAVKYADLSKNRTTDYIFD
WD.NMLAFEGNTAPYMQYAYTRVLSVFR.KAEIDEEQLAAAPVIIR..EDREAQLAARLLQFEETLTVVAREGTPHVMCA
YLYDLAGLFSGFYEHCPILSAENE.EVRNSRLKLAQLTAKTLKLGLDTLGIETVERM
>SP|P43832|SYR_HAEIN/3-577
IQSILSDKIKQAMILAGAD...QSCDA..LIRQSG.KPQFGDYQANGIMAAAKKLGLNPREFAQKVLDNLQLS.DIAEKL
EIAGP..GFINIFLNPTWLTTEISAALSHKN..LGIQATN..KQTVVIDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFL
GHNVIRANHVGDWGTQFGMLIAYLEKMQNE...HA.SEMELQDLEAF.YREAKKHYDEDEV.......FAEKARNYVVKL
QSGD...EY..CRTMWKRLVDITMQQNQHNYARLNVTLTEKDVMGESLYNPMLPSIVKDLK.KQGLAVENDGALVVYLDE
FKNK..DGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDTRQSQHMQQAWLITRKAGYVPDSFSLEHKNF
GMMLGKDGKPFKTRTGGTVKLADLLDEAIERATVLINEKNTNLSNDEKE....AVIEAVGIGAVKYADLSKNRTTDYVFD
WD.NMLSFEGNTAPYMQYAYTRIRSIFN.KTDINSTALLAAPLTIK..DDKERTLAIKLLQFEEAVQTVGKEGTPHVLCA
YLYELAGIFSSFYEHCPILNAEDE.SIKLSRLKLALLTEKTLKQGLTLLGIKTVEKM
>GP|487937|gb|AAB68931.1/69-643
PLDVLRLDISKALHDISGI...DHSLILNALESTN.SMDRGD..LLLPLP..KIKVADPVAVANRWAIELSTH.GCIGKV
CAKGP...FLQFFLDQRYLIQSTVPNILLQKGKYGQKKSRH.QKKVVVEFSSPNIAKPFHAGHLRSTIIGGFLSNLYEAM
GWSVTRMNYLGDWGRQFGLLAVGFKRYGDEK..TL.QKQPIQHLFDV.YVKINMDLAKEEINGNSKCGISGEARSFFKNL
ENGD...EN..AIKIWNRFRSLSIHHYIQTYSRLNINFDIFS..GESQVSKESMNEALDIFRKNNLVKEIDGALVIDLTQ
WSKR..LG...RVVVQKSDGTTLYLTRDVGAAIERKKNLHFDKMVYVISSQQDLYMSQFFMILKKMN.FEWAKDLQHINF
GMVQGMS.....TRKGNVVFLDTILDEARDKALQIMENNKMKISQVDNPQ...RVADLIGVSAIIIQDMKSKRINNYEFN
WN.RMLSFEGDTGPYLQYTHSRLRSLERTSSDFTTDMLIHADFSNLN.EPQLVELVRLLAQYPDVLRRAFETQEPATIVT
YLFKVCHQVSSCYKKIWVSGKPAD..IAIPRLAVYSASRQVLHNAMSLLGLVPVDRM
>SP|Q05506|SYRC_YEAST/31-607
IVDLMRNYISQELSKISGV...DSSLIFPALEWTN.TMERGD..LLIPIPRLRIKGANPKDLAVQWAEKFPCG.DFLEKV
EANGP...FIQFFFNPQFLAKLVIPDILTRKEDYGSCKLVE.NKKVIIEFSSPNIAKPFHAGHLRSTIIGGFLANLYEKL
GWEVIRMNYLGDWGKQFGLLAVGFERYGNEE..AL.VKDPIHHLFDV.YVRINKDIEEEGDSIPLEQSTNGKAREYFKRM
EDGD...EE..ALKIWKRFREFSIEKYIDTYARLNIKYDVYS..GESQVSKESMLKAIDLFKEKGLTHEDKGAVLIDLTK
FNKK..LG...KAIVQKSDGTTLYLTRDVGAAMDRYEKYHFDKMIYVIASQQDLHAAQFFEILKQMG.FEWAKDLQHVNF
GMVQGMS.....TRKGTVVFLDNILEETKEKMHEVMKKNENKYAQIEHPE...EVADLVGISAVMIQDMQGKRINNYEFK
WE.RMLSFEGDTGPYLQYAHSRLRSVERNASGITQEKWINADFSLLK.EPAAKLLIRLLGQYPDVLRNAIKTHEPTTVVT
YLFKLTHQVSSCYDVLWVAGQTEE..LATARLALYGAARQVLYNGMRLLGLTPVERM