HMM Seed Alignment: TIGR00459
Download Alignment>SP|P43817|SYD_HAEIN/1-588
MMRT.HYCGALNRNNIGQDVTLSGWVH.RRRDLGG.LIFIDMRDRDG.IVQVCFDPK.YQDALTAAAGLRNEFCIQIKGE
VIARPDNQINKNMATGEVEVLAKELRIYN.ASDVLPLDFN..QNNTEEQ....RLKYRYLDLRRPEMAQRLKTRAKITSF
VRRFMDDN.GFLDIETPMLTKATPEGARDYLVPSRVH....KGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLR
ADRQPEFTQIDVETSFLTAPEVREIMERMVHGLWLDTIG....VDLG.K...FPV...........MTWQEAMRRFGSDK
PDLRNPLEMVDVADIVK.....DVEFKVFNEPANNP.NGRVAVIRVPNG.AEITRKQIDEYT...QFVGIYGAKGLAWAK
VNDINAGLEGVQSPIAKFLNEDVWKGLAERVNAQTGDILF..FGADK.WQTTTDAMG..ALRLKLGRDLG..LTRLDEWQ
PLWVID.........FPMFERD.EEGNLAAMHHPFTSPKDFSPEQLEADPTSAVANAYDMVINGYEVGGGSVRIFDPKMQ
QTVFR.ILGIDEEQQREKFGFLLDALKFGTPPHAGLAFGLDRLTMLLTGTENIRDVIAFPKTTAAACLMTEAPSFANPQA
LEELAIS...VVKAE...
>SP|P21889|SYD_ECOLI/1-590
.MRT.EYCGQLRLSHVGQQVTLCGWVN.RRRDLGS.LIFIDMRDREG.IVQVFFDPD.RADALKLASELRNEFCIQVTGT
VRARDEKNINRDMATGEIEVLASSLTIIN.RADVLPLDSN..HVNTEEA....RLKYRYLDLRRPEMAQRLKTRAKITSL
VRRFMDDH.GFLDIETPMLTKATPEGARDYLVPSRVH....KGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLR
ADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKG....VDLG.D...FPV...........MTFAEAERRYGSDK
PDLRNPMELTDVADLLK.....SVEFAVFAGPANDP.KGRVAALRVPGG.ASLTRKQIDEYG...NFVKIYGAKGLAYIK
VNERAKGLEGINSPVAKFLNAEIIEDILDRTAAQDGDMIF..FGADN.KKIVADAMG..ALRLKVGKDLG..LTDESKWA
PLWVID.........FPMFEDD.GEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHNGDMQ
QTVFG.ILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTA
LAELSIQ...VVKKAENN
>SP|P73851|SYD_SYNY3/1-599
.MRT.HYCGDLRTTHLGETVTLYGWVD.RRRDHGG.VIFLDLRDRQG.IVQIASSPDQTPASYPVAEGLRNEYVVQVTGV
VSKRPPESLNEKIPTGEIEIYADSIILLNGVNQQLPFVVS..SHEAEQVREDVRLKYRYLDLRRARLSQNLQLRHQVVKA
MRRFLEDQENFLEIETPILTRSTPEGARDYLVPSRVN....PGEWYALPQSPQLFKQLLMVAGMDRYYQIARCFRDEDLR
ADRQPEFTQLDMEMSFMGQEEILDLNEALICHIFKVVKN....IDLPRP...FPR...........LTYQESMAKYGNDR
PDTRFGLELVDVSDLLG.....NTGFKVFSAAVSS..GGSIKAIRVPGGNETISNVRIKPGGDLFKEATEAGAKGIAYIR
VRDNGE..IDTIGAIKENLDEAQVKTLLQLTQAEAGDLLL..FGAGD.TATVDKSLS..RLRLVLGEQLG..LIDPDAIN
LLWITD.........FPMFEWNSDEKRFEALHHPFTAPHPDDLGDLKTA....RAQAYDLVMNGVEIGGGSLRIYQREVQ
EKVFA.TIGLSPEEAHEKFGFLLDAFEYGTPPHGGIAYGLDRLVMLLAKEDSIRDVIAFPKTQQASCLLTEAPAAVDKKQ
LKELSVASTYVPKVKVDD
>SP|O32038|SYD_BACSU/2-592
FGRT.YYCGDITEKAIGESVTLKGWVQ.KRRDLGG.LIFIDLRDRTG.IVQVVFNPDVSKEALAIAEGIRNEYVLDIQGK
VVAREEGTVNPNLKTGAIEIHADGVNVLN..AAKTPPFAI..SDQAEEVSEDVRLKHRYLDLRRPAMFQTMQLRHNVTKA
VRSFLDEN.GFLDIETPILTGSTPEGARDYLVPSRVH....EGEFYALPQSPQLFKQLLMVSGIERYYQIARCFRDEDLR
ADRQPEFTQIDIEMSFMSQEDIMSLAEEMMAKVMRETKG....EELQLP...LPR...........MTYDEAMNKYGSDK
PDTRFDMLLTDVSDIVK.....DTEFKVFSSAVAN..GGVVKAINVKGGAGDYSRKDIDALG...AFAANYGAKGLAWVK
VEADG.....VKGPIAKFFDEEKQSKLIEALDAAEGDLLL..FGADQ.FEVVAASLG..ALRLKLGKERG..LIDEKLFN
FLWVID.........WPLLEHDPEEGRFYAAHHPFTMPVREDLELIETAPEDMKAQAYDLVLNGYELGGGSIRIFEKDIQ
EKMFA.LLGFSPEEAAEQFGFLLEAFEYGAPPHGGIALGLDRLVMLLAGRTNLRDTIAFPKTASASCLMTEAPGEVSDAQ
LDELHLS....IKKKVKN
>SP|P56459|SYD_HELPY/1-577
.MRS.HFCTEISEKDVGKIVKVAGWCN.TYRDHGG.VVFIDLRDKSG.LVQLVCDPS..SKAYEKALEVRSEFVLVAKGK
VRLRGAGLENPKLKTGKIEIVLEELIIEN.KSATPPIEIG..NKHVNED...LRLKYRYLDLRSPNSYEIFKLRSEVALI
TRNTLAQK.GFLEIETPILSKTTPEGARDYLVPSRVH....EGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLR
ADRQPEFTQIDAEMSFCDENDVMGVVEDLLQEIFKAV.G....HTISKP...FKR...........MPYKEAMENYGSDK
PDLRFELPLIEVGDCFR.....DSSNAIFSNTAKDPKNKRIKALNVKGADALFSRSVLKELE...EFVRQFGAKGLAYLQ
IKEDE.....IKGPLVKFLSEKGLKNILERTDAQVGDIVF..FGAGD.KKIVLDYMG..RLRLKVAETLD..LIDKDALN
FLWVVN.........FPMFEKT..ENGYHAAHHPFTMPKNIECEDIEEV....EAHAYDVVLNGVELGGGSIRIHKEEMQ
KKVFE.KINIHEEEAQKKFGFLLEALKFGAPPHGGFAIGFDRLIMLMTKSHSIRDVIAFPKTQKASCLLTNAPSPINEEQ
LRELHIR....LRK....
>SP|P75068|SYD_MYCPN/9-557
FKQR.VFIGNLTSEHLNKTVTIAGWVK.RIKKLGE.LNFVIVGDKTN.TIQVTCKNK....EQ..VKYLTREDLVIVKGK
L........KR.LDSVRFEITNPTITLFA.KSKTPPLIIED.KTDALEE...VRLRYRYLDLRRPVMQKRLALRHKVTLA
VRNWLDQM.GFIEVETPTLTKSTPEGARDFLVPARIR....EHSFYALPQSPQIYKQLLMVGGTEKYFQIAHVYRDEDSR
KDRQPEHTQIDLEVAFYTKEMVMDLIQRLFVDVFRQVLN....IKLKKP...FPV...........LKFAEAFNRFGSDK
PDLRYGFELEDCTDLFQ.....DSP.NQFTNLINA..GGIVGGIQLPNL..YLDEVSFKALR...KLAKDNGVS....LE
FYSDK......ASSLKQPLDLP..........LA.GTILL..VAHKS.KTQAWTALG..AIRNELKYHLN..LVKPNQYS
FCWIVD.........FPLYEFDEKEQKWVSAHNMFSNPQPQWLVNFENHKAEALSEQYDLVLNGFELGSGSIRIHDPEVQ
TRLMQ.SLGVDPQ....QFGFVMEAYQYGAPVHAGMGLGLDRLMMIINNVDNIREVMAFPKNAQGIEMHTNAPDQVDIKD
ITTIWSK..HPVK.....
>SP|P47282|SYD_MYCGE/3-550
FNQR.ILIGSISTEQLNKTIVIIGWIK.RIKKLGE.INFIIVGDKSG.TIQVTCKDK....EQ..IQQLTREDIVIVKAK
L........QR.LDSVRFELINPTIKLFS.KSKTPPLIIED.ETDALEE...VRLKYRYLDLRRRLMQKRLLLRHQFILA
IRNWFNQQ.GFIEIETPTLSKSTPEGAQDFLVPARIR....KDCFYALVQSPQIYKQLLMIAGVEKYFQIARVYRDEDSR
KDRQPEHTQIDFEISFCNQKMIMNLVEKLFFSVFLDVFQ....IKIKKT...FPV...........FKFSELFERFGSDK
PDLRYGFEIKDFTSLFQ.....DHQ.NQFTKLIEA..KGIIGGIELTNI..ELSTDKIKALR...KIAKDHDVS....LE
VHNKN......NSTLKTSIKCD..........EK.NTLLL..VANKS.KKKAWTALG..AIRNELKYHLD..IVKPNQYS
FCWVVD.........FPLYDFDEKTNQWISNHNIFSKPKQEWIDNFESNKNEALSEQFDLVLNGFEIGSGSIRINDPIVQ
KRLMN.SLNIDPN....KFAFLLEAYQYGAPVHGGMGLGIDRLMMILNQTDNIREVIAFPKNNHGIEVHTNAPDKID.KE
EVKWWIK..ELVK.....
>SP|P15179|SYDM_YEAST/31-658
FRKDTSTIKQLKGLSSGQKIVLNGWIEQKPKRVGKNLIFGLLRDSNGDIIQLVDNKS.......LLKGFTLEDVVQAVGI
LSLKR...KLSNEDADEYEVQLEDITVLN.ASNKKPAQMQDFKLSAIYP.....PEFRYLQLRNPKYQDFLKKRSSISKE
IRNSFNNF.DFTEVETPMLFKATPEGAREFLVPTRTKRSDGKPSFYALDQSPQQYKQLLMASGVNKYYQMARCFRDEDLR
ADRQPEFTQVDMEMAFANSEDVMKIIEKTVSGVWSKFSKKRGLLTLDSKGTLVPAKKENGTVSIFRMTYEQAMTSYGIDK
PDLRAPDLKIINLGEFNAFSHLNKKFPVFEVIILR..SAFSNMEEYKERWSFLTNNSNYNYRVPIVLPIENDEQANSNWF
ENFHAIATFENPHLITKFLKLKKGDIVCGCTREPNHSIFENPTPLGRLRQLVLQSEHGKNIYHAVNKDVASWIVDFPLFS
PVIIEDKSGKKEKLAYPEYEKD....RLCSTHHPFTMVKLKDYEKLEKTPEKCLGRHYDLVVNGVELGGGSTRIHDPRLQ
DYIFEDILKIDNAY..ELFGHLLNAFDMGTPPHAGFAIGFDRMCAMICETESIRDVIAFPKSITGADLVVKSPSVIPESI
LEPYNIKYS.NSKK....