HMM Seed Alignment: TIGR00468
Download Alignment>GP|836732|dbj|BAA09216.1/151-503
LDSIDAKILNDLKKRKLIAQGKITDFNVTK.....GPEFSTDLTKLETDLTSDMVSTNAYKDLKFKPYNFNSQGVQISSG
ALHPLNKVREEFRQIFFSMGFTEMPSNQYVETGFWNFDALYVPQQHPARDLQDTFYIKDPLTADLPDDKTYMDNIKAVHE
QGRFGSIGYRYNWKPEECQKLVLRTHSTAISARMLHDLAKDP....KPTRLFSIDRVFRNEAVDATHLAEFHQVEGVLAD
Y..NITLGDLIKFMEEFFERMGV..TGLRFKPTYNPYTEPSMEIFSWH.E..GL.......QKWVEIGNSGMFRPEMLES
MGLPKD..LRVLGWGLSLERPTMIKYKVQNIRELLGHKVSLDFIETNPAARLDEDLYE
>SP|Q57911|SYFA_METJA/151-480
KIIDILKKRGYVDFDEE.KEIKIKLTEKGKEFIKNPIEIEEEITQLTRDII....ISGKWKKAYIRPYDVKVPTKPIYPA
KVHPLTRIIREVKEILLAMGFKEVKSPI.VETEFWNFDMLFEPQDHPAREMQDTFFLKYPNEGD........IPEDLLSK
VKEVHERCWKYKFDENVSRRLILRTHTTASSIRYLASLSDEE..KNKPHKVFCIDRVFRNEAIDYKHLPEFYQCEGIIMD
D..NVNFNNLIGVLKEFLNRLGFE..KVRFRPAYFPFTEPSLEAEVYL.E..GKG........WLEILGAGIFRPEVLEP
IGIEK....PVLAWGIGFSRLAMLRYGLTDIRDLHKNDLD..WLKRV...........
>SP|O28324|SYFA_ARCFU/146-474
TLKTLMKRK.LVTKSET.KQVYIEVMKKPE......IELEDIITDLTPEML....LEGTWRGKQFLKYDITIPAKEIYGG
KIHPYERIIEECRKVFLEMGFTEIKGHY.VQPAFWNFDALFQPQDHPARDMQDTFYLDR..YIDLEGE.IVERVKATHEN
GWITGSTGWGGEWSLEKARQLVLRTHTTA...ITIHYLAENP...EPPQKAFCIDRVYRRETIDATHLPEFDQLEGVVLD
R..DVGFKHLLGLLKEFFTKMGFE..DVRFRPGYFPYTEPSVEPEVYV.E..GLG........WVELGGAGVFRKEVTEP
LGIRG....KVLAWGLGIGRLAMLKIGLKDLRRLYLPDLG..WLRSMPVARK......
>SP|O26837|SYFA_METTH/171-511
ALKDLKGRKGIVDIRKI.KRHTIELTTEGRKLLERGIEIVEEATQVTHEHL....KSGAWRKLHYRGYNIDAEYPLVYPG
KMHPLRRIIDEIRSIFLKLGFTESRGPI.VESAFWNFDCLFQPQDHAAREMQDTFYVKNPAVTDLPCEDLVRAVQDAHET
GGSTGSEGWQYEWDRDVARQSVLRTHTTC...VSARFLSEN....EPPLKMFSVGRVFRRETITYKHLPEFHQVEGIVAG
D..EVNFRNLLGILREFYRKLGFE...VRFRPAYFPYTYLSTECEIYLPE..KKS........WIELGGAGMFRPEVLEP
LGVET....PVAAFGLGIERLAMIRFDIKDIRMLYQSDLG..WLRGLPVTGDLEL...
>EGAD|98902|BB0513/182-527
KKKGADSVFFKIIEKLDLKFRLSSFGLEVKNFLMKSKLTGDELTKLTPEIL....KNKTYENKKFRAYNIHIPSAKTFIG
RANSYLDYISKIKDKLVGLGFQEFDGPL.VETEFFNNDALFMPQFHPSRDIKDVYYISDPSMQESLPEPYFSNVKLAHET
GYATGSRGWRYSFSEDLSKRLVLRTHGTV.....LSAKQLIN.AKNP.SRYFGVIRCFRYDQVDATHGVDFYQTEGIVIE
D..GVSIKTLLGLLEIFAKELAGA.TEIKYVPAYFPFTEPSIEIHVKHP...VLG........WFELGGSGIFRPEVTKP
LGIDL....PVIAWGIGIDRMALMHLGLNDLRDLFTYDIGDVILRRGKIDAKVRNL..
>SP|P08312|SYFA_ECOLI/37-327
HLTLQMTTLRELPPEE..RPAAGAVINEAK......EQVQQALNARKAELE....SAALNARLAAETIDVSLPGRRIENG
GLHPVTRTIDRIESFFGELGFTVATGPE.IEDDYHNFDALNIPGHHPARADHDTFWFDT.....................
...................TRLLRTQTSG...VQIRTMKAQQ....PPIRIIAPGRVYRND.YDQTHTPMFHQMEGLIVD
T..NISFTNLKGTLHDFLRNFFEEDLQIRFRPSYFPFTEPSAEVDVMGKN..GK.........WLEVLGCGMVHPNVLRN
VGIDPEV.YSGFAFGMGMERLTMLRYGVTDLRSFFENDLR..FLKQFK..........
>SP|P43819|SYFA_HAEIN/39-329
HFTQLMQELRNVSAEE..RPAMGAKINEAK......QAALEFLNAKKTEWE....QAELNSKLEKERVDVSLPGRKVETG
GLHPVTMTINRVTKFFSELGFSVENGPE.IESDYYNFDALNIPKHHPARADHDTFWFNP.....................
...................ELLLRTQTSG...VQIRTMEKMQ....PPIRIMAPGRVYRND.YDQTHTPMFHQIELLYVD
K..KANFTELKGLLHDFLRAFFEEDLQVRFRPSYFPFTEPSAEVDVMGKN..GK.........WLEVLGCGMVHPNVLRN
VGIDPNE.YSGFAVGMGVERLTMLRYNVTDLRSFFENDLR..FLKQFK..........
>SP|Q55187|SYFA_SYNY3/42-331
ELSLILKGMGKLSAEE..RPKFGAIANEVK......EALQHDLESRKANLQ....NAAIEAQLAAETLDVTMAGSYRPQG
RRHPLNSTVDRVLDIFVGLGYTVATGPQ.VETDYYNFEALNIPADHPARDMQDTFFLKD.....................
...................GRLLRTHTSP...VQIRYMEKHD....PPIRIVAPGRVYRRDTVDATHSAVFHQVELLAID
K..GLAFTHLKGTIQAFIKQMFGEALPIRFRASYFPFTEPSAEVDVQW.Q..GK.........WLEVMGCGMVDPNVMEA
VGYDPEV.YTGFAAGFGVERFAMVLHQIDDIRRLYNSDLR..FLRQF...........
>SP|P17921|SYFA_BACSU/38-344
PITEVLRGMGKLSAEE..RPKMGALANEVR......ERIANAIADKNEKLE....EEEMKQKLAGQTIDVTLPGNPVAVG
GRHPLTVVIEEIEDLFIGMGYTVEEGPE.VETDYYNFESLNLPKEHPARDMQDSFYITE.....................
...................ETLMRTQTSP...VQTRTMEKHE..GKGPVKIICPGKVYRRDNDDATHSHQFMQIEGLVVD
K..NISMSDLKGTLELVAKKMFGQDREIRLRPSFFPFTEPSVEVDVTCFKCGGNGCSVCKGTGWIEILGAGMVHPNVLKM
AGFDPKE.YQGFAFGMGVERIAMLKYGIDDIRHFYTNDVR..FISQFKQA........
>SP|P56146|SYFA_HELPY/30-328
VFADKFNQLKHLNGEE..KNAFAKEIHHYK......QAFEKAFEWKKKAII....ELELEERLKKEKIDVSLFN.AIKTS
SSHPLNYTKNKIIEFFTPLGYKLEIGSL.VEDDFHNFSALNLPPYHPARDMQDTFYFKD.....................
...................HKLLRTHTSP...VQIHTMQEQT....PPIKMICLGETFRRD.YDLTHTPMFHQIEGLVVD
QKGNIRFTHLKGVIEDFLHYFFGG.VKLRWRSSFFPFTEPSAEVDISCVFCKQEGCRVCSHTGWLEVLGCGMVNNAVFEA
IGYEN...VSGFAFGMGIERLAMLTCQINDLRSFFETDLR..VLESF...........
>SP|P47436|SYFA_MYCGE/35-341
DLKPLLQKIKTATKLSE.KSSLGKLYQSLD......IQLTDLLTSYKKTFE....INNQVSQKP..SLDVMLPATEFTNG
SNNALYQVIDNLVEYFKSFLFTINFDSE.LTSISDCFDLLNIPKDHSSRNESDSFYIDK.....................
...................TSLLRTHCTA...TTLKAVRTSKKTNNPDIRVVSLGAVFRNDSDDATHSHQFTQLDFMWIK
K..GLSLANLKWFINNMITHFFGENTFTRFRLSHFPFTEPSFEIDIRCWLC.QNGCSICKQTKWIEILGAGIIHPQVMNN
MGIGDTENITGIAAGIGIERLAMLKYGIDDIRDFYDNNFK..FLTQFTD.........
>SP|P75564|SYFA_MYCPN/35-341
DLKPLLSQIKETTDIET.KRHLGQLYKQLE......STLQTLHDTQLQVFT....QAQSSSVLT..HGDVMLLATSFAPG
SSNIIYQVIDELVNYFKKFLFTVNYDSE.LTTIADCFDLLNIPKDHPSRNLTDTFYLDK.....................
...................NRLLRTHCTA...ATLRAVKETKKSNNPDIRIASFGAVFRKDDDDATHSHQFNQLDFMWIK
K..DFSLTNLKWFMQNMINHIFGENTSARFRLSHFPFTEPSFEIDIRCWLC.QNGCGVCKKTRWIEVLGAGILHPQVMAN
MGFSDTDNIRGIAAGIGIERLVMLKHGISDIRDLYDNNFK..FLAQFTD.........