HMM Seed Alignment: TIGR00486
Download Alignment>SP|P75743|YBGI_ECOLI/1-247
MKNTELEQLINEKLNSA.AISDYAP..NGLQVE.........GKETVQKIVTGVTASQALLDEAVRLGADAVIVHHGYFW
KGESPVIRGMKRNR.LKT.LLANDINLYGWHLPLDAHPELGNNAQLAALLGITV...................MGEIEP.
................................................................................
............LVP..WGELTMPVPGLELASWIEARLGRKPLWCGDTGP......EVVQRVAWCTGGGQS...FIDSAA
RFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERG..GI...RALSEWLN.ENTDLDVTFIDIPNPA
>OMNI|HI0105/29-279
MNNLELEQLINQKLSSD.KINDYAP..NGLQVE.........GKTEIKKIITGVTASQALINYAISQNADAILVHHGYFW
KSETPCIRGMKGKR.IKA.LLVNDINLYGYHLPLDVHPELGNNAQLAKLLDIEN...................LQPLEKG
S...............................................................................
...........VSIPV.WGELKEPMTGKDFAEKIEKVLNRKPLICIENGP......HLIRKIGICTGGGQG...YIDLAA
EQGCDAFITGEVSEQTIHSAREQGLYFFSAGHHATERY..GI...KALGEWLA.KEYGFDVEFKDIDNPA
>SP|O28497|YH77_ARCFU/1-245
MNLAEVVRFLDDFLEIN.SYQDVSN..NGLQVE.........GSEEVKKVAFAVDASMESFRAAKAVNADMLVVHHGLIW
GG.IGYIRGIVKRR.IEF.LLRSNLSLYAAHLPLDAHREVGNNAVILRKIGAEP...................QEEFGE.
................................................................................
............YKGV.KIGFSAKLEKATAVGEIAEKLG..PAMVLPFGE......ERVRKVAAVSGKGCF...ALNEAI
DAGVELFITGEPEHEAYHLAKEGGINVFFLGHYESEKF..GV...QSLMEVVR.EKLGIEAVFLDIPTNL
>SP|O51424|Y468_BORBU/1-248
LNVRDLSFKLNSIFDIN.KYEHIDKNLNGLQVGN........INAKVNKVAFAVDASFSTLKEAK..GNDFLITHHGIFW
SK.KERIVSNMYDK.TKF.LIENNLALYSVHLPMDAHSVYSHSKVFSDFLGLKN...................SFAFAN.
................................................................................
............YGGVNLGIIADSVFSFSEILEKIKKEN.KHILFSKKFK......ESVNKVAIVSGSGYS...FFEEAL
CHDVDLFITGDTSHQIYSLAEEFGVNLIFAGHYFTETF..GL...IKLMEDFK.IQEDLEVKFICKNTNL
>OMNI|MJ0927/6-249
MKAKEIIEFIETFAPKD.LAIEGDN..IGLQVGD.......NLDKEIKKLGIALDPSLSVIKKAEKEGVDFLFTHHPLLK
DP.IRNFTGVIYKK.LKI.LMENDIILYSAHTNLDICKN.GLNDALAELYNLEN...................PKPLYDN
................................................................................
............GLGR.VGIFKGSFEEFLEITKKYIHKN..PIVVKSKEV......DDNFKLAVLSGYGLSQ..SSIKYV
AEKADVYLSGDLTHHSKILAEELGLVVVDATHYSTEVF..GL...KKFKEFLS.SNLDLEIISLDF....
>SP|P54472|YQFO_BACSU/5-369
VNGQQIIQLFEQFSPKA.YAVEGDK..IGLQIG........TLNKPIKNVMVTLDVLESVIDEAIEKEVDLIIAHHPPIF
RSLKHISTDQPAGRLIEK.CLKHDIAVYAAHTNLDVADG.GVNDLLAEALELSETEVLAPTYTDPLKKLAVYVPKEYEEQ
VRAALGNAGAGHIGEYSHCAFSSEGIGSFKPLDGAKPFIGEVGELELVHEVRLETVFPKSVEKAVINAMIKSHPYEEVAY
DIYPVEQTPAEKGLGR.VGTLKNEMTLKEFALFVKDKLDVNGVRMVGDAD......SMVKKVAVLGGDGNK...YIHHAK
RKGADVYVTGDLYFHVAHDAMMLGLNVVDPGHYAEKIMKEGVT..RKLTSMCNDKKFGVNIFVSETDTNP
>SP|O27214|YB46_METTH/4-231
IRIDSLIELMDRVAPPE.LALPGDR..IGYHGP..........EIEVEAVLVLMDYLEDVAVDGY...DLLVL.HHPPEV
EP.....................PIPYLTVHSNWDVADG.GACDALADALGLDV....................ESFLDP
................................................................................
............DTG..VDRICRADLSLEELLERTGVLN.PETLRVVNPR......EYVDRVAVVSGFGLSDKSLIMRAW
SEGVSAYLSGDLTHGPAILGRNMDLTLIDAGHHATEMP..GLHRLREVIEDFGVMAELLDTGTPWSEYRA
>SP|P53081|NIF3_YEAST/8-284
AQLDKLVRSITKFYPQKYADKSWDN..TGLLIDCSTAQVTTADANAKTKVLLTVDLTKSVAQEAVDANCNVIVAYHPFIF
PSWNRLSPHTNPQHETAIKLIQYGISVYCPHTAVDAARG.GVNDWLVRGLNNGEN.................VAKSYALE
TVSG............................................................................
......ETDDLIGYGR.FVEFNKDISLEQIVKNVKRVLRVPYVQVASLAAPSAWNQLKIKKVAVCAGSGSG....VFKQL
KEDVDLYYTGEMSHHEVLKWKEMGKTVIVCNHSNTERG..FL...QDVMKGLL.QDEGHEVVVSKMDCDP
>SP|O25613|Y959_HELPY/2-242
ALVKEVLVVLNRLSPFE.LQESWDN..SGLNVG........SENSEFSEIVACLEITLKIALNAP..QNALIITHHPLIF
KPLKTLNDEIYPGNILKI.LIQKNVSVISMHTNFDKTHL...NKHFAHALLEFD....................GLVEK.
................................................................................
..............GLMLVKENANIEFDALVKKIKSSLGVGSLACVKSS.......QTIKDLAFVCGSGAS.....MFSS
LKAQSCLITGDVKYHDAMIAQSLGISLIDATHYYSERG..FA...LIVAEILHSFNYLVTIENFKNPLQI