HMM Seed Alignment: TIGR00553
Download Alignment>OMNI|NTL01AT1623/57-382
LAGYMSYEAG..................FLFEPKLAPFAAEPR.NVPFLNFGVFSGPQ......PDEGRFARPDAVPDAD
AFLTDPVAAWT........LPEYQQRFGKLHDHLRRGDCYQGNLTMPVHAGWNGDPLTAFWSLIERQPVKYGALVDLGGP
IILSRSP..ELFFSVDGEGFIETHPMKGTTPRGANALEDRAIIAAMLEDDKTLAENRMIVDLLRNDISRITEVGSLDVPR
LFDIETYPTVHQMVSHVRAKLLPEVTVEDIFSALFPCGSVTGAPKMWAMKILRELEASSRNAYCGAIGFMSPNGD.....
MRFSVAIRTMTLFD.....DGRAVFNVGGGIVFDSVAEAEYDECLLKSKFA
>OMNI|CT1712/80-406
LAGWLSYEAG..................YLLDPALAALASAGADRELLGWFGVYGRPERV....RRETVEAEDAAAAARS
CAVSGFGFEFS........EAEYCERIDRLRTEIAAGNVYQANFTGRCRFSFDGAVEALYVKMKRRQPSPWSAFLNTGDR
QILSFSP..ELFFASDGR.LIETMPMKGTAPRRERPEEDLAEKAGLAKCEKNRAENLMIVDLLRNDLGRICATGSVQASG
LFETQTYPTLHQMVSTVRGELRPATRLHDLFRALFPSGSVTGAPKVRAMQLICELEKSLRGVYTGAVGFMLPEGR.....
MAFNVAIRTIELRG......QSGVYGTGSGIVWDSDPHAEFRECMLKTRIL
>GP|22417096/66-403
LAGWIGYEAG..................YALEPRLHPFLQRRRHETPLLRLFAFERRSRF....PVSAVDHWLSGSARHD
AHLDPLEPAIG........FAEYAAAFHRVKDAIEAGDIYQANLTFPLCGAWRGDPLSLYRAIRPEANARFAALIFDGHD
WLLSFSP..ELFFSVSGD.KLQVRPMKGTRPRGADPESDRRFARELAESVKDRAENLMIVDLMRNDLSRISRPGSVKVDQ
PFRVEAYPTVFQMTTGITSRFDGEPGLSSIIQAMFPCGSITGAPKLRAMEIIHEVERWNRGPYCGAIGEFARMEEGRGVQ
GRFNVAIRTLRLRPGAHPGQGTAIFGVGSGIVADSVLEDEWEECLLKARFV
>OMNI|NTL02SP0582/50-368
VVGYVSYEAA..................PAFEEKLAVHKAPLL.GEYLLYFTVHDRVETS....PIPLTYDEVDLPSNWQ
EVTS...............AADYEKAIAQIHHHLRQGDTYQVNYTVQLKQDLSANPFAIYNRMVVEQEAGYNAYVEHDDM
AVISMSP..ELFFEQNDR.ELTTRPMKGTTQRAITDQEDLEQASWLEQDSKNRSENMMIVDLLRNDMNRISEVGSEHVER
LCQVEQYSTVWQMTSTIKSQLRADVDLVTIFRSLFPCGSITGAPKIATMEIIKDLEPQPRGVYCGTIGLLHPNGR.....
RIFNVAIRTIQLHQ......GEAIYGVGGGITWDSTWQSEYREVHQKAAVL
>SP|P05041|PABB_ECOLI/106-447
ALGLFGYDLGRRFESLPEIAEQDIVLPDMAVGIYDWALIVDH..QRHTVSLLSHNDVNAR.....RAWLESQQFSPQEDF
TLTSDWQSNMT........REQYGEKFRQVQEYLHSGDCYQVNLAQRFHATYSGDEWQAFLQLNQANRAPFSAFLRLEQG
AILSLSP..ERFILCDNS.EIQTRPIKGTLPRLPDPQEDSKQAVKLANSAKDRAENLMIVDLMRNDIGRVAVAGSVKVPE
LFVVEPFPAVHHLVSTITAQLPEQLHASDLLRAAFPGGSITGAPKVRAMEIIDELEPQRRNAWCGSIGYLSFCGN.....
MDTSITIRTLTAIN......GQIFCSAGGGIVADSQEEAEYQETFDKVNRI
>SP|P32483|PABS_STRGR/331-685
WVGCLGYELKAECDG...DAAHRSPDPDAVLVFADRALVLDHRTRTTYLLALVEDDAEAEARAWLAAASATLDAVAGREP
EPCPEAPVCTTGPVELRHDRDGYLKLIDVCQQEIAAGETYEVCLTNMAEADTDLTPWAAYRALRRVSPAPFAAFLDFGPM
AVLSSSP..ERFLRIDRHGRMESKPIKGTRPRGATPQEDAALVRALATCEKDRAENLMIVDLVRHDLGRCAEVGSVVADP
VFQVETYATVHQLVSTVTARLREDSSPVAAVRAAFPGGSMTGAPKIRTMQIIDRLEGGPRGVYSGAIGYFSLTGA.....
VDLSIVIRTVVLSG......GRLRYGVGGAVIALSDPADEFEETAVKAAPL
>OMNI|NTL01LL1346/92-423
LLGFVSYEQ.................DPACFAAYDEVLLFDH..RTKLLRVVQFEQTDGQYWLTESEEIEVDSEIEFDGQ
NGIGAIFIDQT........RQEYIASIKKLQDYMKAGDIYVANLTQQFEIWSDQKPIEVFKKTRKQIPAPFSSFLQYPEW
KMTQISSSVERFVSIHDG.ALISKPIKGTIARGEDVGADRLQKEILSDSSKERSELLMVTDLLRNDIVRISQPFSLSVPK
FAEIETFSHVHQLVTSIKSRIKEDLTFSEFMTALFPGGSITGTPKKRAMEIIKEVEKQPRGIYTGMQGWLSREMD.....
LDMNIVIRTLVHDG......EHYQLGVGGGITFESKAEAEFSEILLKAKPF
>OMNI|MT1034/198-528
WVGYLSYPDAG.............ADGRPHRIPEAAGGWTDCVLRRDRDGQWWYESLSGAPIADWLASALATTRASVARP
APACRIDWEPAD.......RAAHRDGVLACLEAIGAGEVYQACVCTQFAGTVTGSPLDFFIDGFGRTAPSRSAFVAGPWG
AVASLSP..ELFLRRRGS.VVTSSPIKGTLPLDAPP.......SALRASAKEVAENIMIVDLVRNDLGRVAVTGTVTVPE
LLVVRPAPGVWHLVSTVSARVPLEEPMSALLDAAFPPASVTGTPKLRARQLISQWERYRRGIYCGTVGLASPVAG.....
CELNVAIRTVEFDT.....AGNAVLGVGGGITADSDPDAEWAECLHKAAPI