HMM Seed Alignment: TIGR00604
Download Alignment>SP|P26659|RA15_SCHPO/7-716
DLPILFPYPRIY.....PEQYQYMCDLKHSLDAGGIALL.....EMPSGTGKTI....................SLLSLI
VSYQQHYP...........EHRKLIYCSRTMSEIDKALAELKRLMAYRTSQLGYEEP.FLGLGLTSRKNLCLHPSVRREK
NGNVVDARCRSLTAGFVREQRLAG..M....DVPTCEFHDNLEDL.......EPHSLISNGVWTLDDITEYGEKTTRCPY
FTVRRMLPFCNVIIYSYHYLLDPKIAERVSRELSKD...CIVVFDEAHNIDNVCIESLS...IDLTESSLRKASKSILSL
EQKVNEVK.....QSDSKK......LQDEYQKLVRGLQDANAANDEDQ.FMANPVLPEDVLK...EAVPGNIRRAEHFIA
FLKRFVEYLKTRMKVLHVIAETPTSFLQHVKDITFIDKKPLRFCAERLTSLVRALQISLVEDFHSLQQVVAFATLVATYE
RGFILILEPFETENATVPNPILRFSCLDASIAIKPVFER.FRSVIITSGTLSPLDMYPKMLQFNTVMQESY.....GMSL
ARNCFLPMVVTRGSDQVAISSKFEARNDPSVVRN.YGNILVEFSKITP..DGLVAFFPSYLYLESIVSSWQSMGILDE..
......VWKYKLILVETPDP..HETTLALETYRAACSNGRGAVLLSVARGKVSEGVDFDHHYGRAVIMFGIPY......Q
YTESRVLKARLEFLRDTYQIREA....DFLTFDAMRHAAQCLGRVLRGKDDHGIMVLADKRYGRSDKRTKLPKWIQQYIT
EGATNLSTDMSLALA
>SP|P06839|RAD3_YEAST/7-717
DLPVLFPYPKIY.....PEQYNYMCDIKKTLDVGGNSIL.....EMPSGTGKTV....................SLLSLT
IAYQMHYP...........EHRKIIYCSRTMSEIEKALVELENLMDYRTKELGYQED.FRGLGLTSRKNLCLHPEVSKER
KGTVVDEKCRRMTNGQAKRKLEEDPEA....NVELCEYHENLYNI.......EVEDYLPKGVFSFEKLLKYCEEKTLCPY
FIVRRMISLCNIIIYSYHYLLDPKIAERVSNEVSKD...SIVIFDEAHNIDNVCIESLS...LDLTTDALRRATRGANAL
DERISEVR.....KVDSQK......LQDEYEKLVQGLHSADILTDQEEPFVETPVLPQDLLT...EAIPGNIRRAEHFVS
FLKRLIEYLKTRMKVLHVISETPKSFLQHLKQLTFIERKPLRFCSERLSLLVRTLEVTEVEDFTALKDIATFATLISTYE
EGFLLIIEPYEIENAAVPNPIMRFTCLDASIAIKPVFER.FSSVIITSGTISPLDMYPRMLNFKTVLQKSY.....AMTL
AKKSFLPMIITKGSDQVAISSRFEIRNDPSIVRN.YGSMLVEFAKITP..DGMVVFFPSYLYMESIVSMWQTMGILDE..
......VWKHKLILVETPDA..QETSLALETYRKACSNGRGAILLSVARGKVSEGIDFDHQYGRTVLMIGIPF......Q
YTESRILKARLEFMRENYRIREN....DFLSFDAMRHAAQCLGRVLRGKDDYGVMVLADRRFSR..KRSQLPKWIAQGLS
DADLNLSTDMAISNT
>GP|604371|gb|AAA85822.1/7-717
GLLVYFPYDYIY.....PEQYSYMLELKRTLDAKGHGVL.....EMPSGTGKTI....................SLLSLI
VAYQRAFPL..........DVTKLIYCSRTVPEIEKVVEELRKLMEFYAKETGEVNN.FLALSLSSRKNLCIHPEVSSLR
FGKEVDGKCHSLTASYIRAQRHSNP......NQPVCRFYEEFDAV.......GRQVPLPAGIYNLDDLKDFGRRKGWCPY
YLARYSILHANIVVYSYHYLLDPKIADLVSKELAKK...SVVVFDEAHNIDNVCIDSMS...VNITRRTVDRCQNNVDTL
QNTIHKIK.....ETDAAK......LREEYRRLVEGLKEANVARE.TDIYLANPVLPDEVLQ...EAVPGSIRTAEHFVG
FLRRFLEYLKARLRVQHVVQESAPQFLKDIFDKVCIDRKPLRFCAERLQCLLRTLEIADIADFSAVTLISNFATLVSTYS
QGFTIIIEPFEDRTPTIANPVLHFSCMDPSIAIKPVFQR.FQSVIITSGTLSPLDIYPRILDFRPVTMASF.....TMTL
ARTCLCPLIVGRGNDQVALSSKFETREDFAVIRN.YGNLLLEMSAVVP..DGIVAFFTSYVYMENIVASWYEQGILEN..
......IQKNKLIFIETQDA..AETSMALEKYQEACENGRGAILLSVARGKVSEGIDFVHHFGRAVIMFGVPY......V
YTQSRILKARLEYLRDQFQIREN....DFLTFDAMRHAAQCLGRAIRGKTDYGLMIFADKRYARSDKRGKLPRWIQEHIN
DGSLNLTVDEAVQLS
>GP|2058510|gb|AAB62733.1/7-710
DLLVYFPYSYIY.....PEQYSYMVALKRSLDNGGPCIL.....EMPSGTGKTV....................SLLSLI
SSYQVKNP............SIKLIYCSRTVPEIEQATEEARRVLQYRNSEMGEESPKTLCMSMSSRRNLCIQPRVSEER
DGKVVDALCRELTSSWNR....ESP......TSEKCKFFENFESN.......GKEILLEG.VYSLEDLKEYGLKHQMCPY
FLSRHMLNFANIVIFSYQYLLDPKIASLISSSFPSN...SIVVFDEAHNIDNVCINALS...INIDNKLLDTSSKNIAKI
NKQIEDIK.....KVDEKR......LKDEYQRLVNGLARSGSTR..ADETTSDPVLPNDVIQ...EAVPGNIRKPSIFIS
LLRRVVDYLKSRLKSQMLLSESPLAFLQGLYHATQISSRTLRFCSSRLSSLLRTLRINDVNQFSGISLIADFATLVGTYN
NGFLIIIEPYYQRQNNTYDQIFQFCCLDASIGMKPIFDK.YRSVVITSGTLSPLDIYTKMLNFRPTVVERL.....TMSL
NRNCICPCILTRGSDQISISTKFDVRSDTAVVRN.YGALLVEVSAIVP..DGIICFFTSYSYMEQIVSVWNEMGLLNN..
......ILTNKLIFVETSDP..AESALALQNYKKACDSGRGAVLLSVARGKVSEGIDFDNQYGRCVILYGIPY......I
NTESKVLRARLEFLRDRYQIREN....EFLTFDAMRTASQCVGRVIRGKSDYGIMIFADKRYNRLDKRNKLPQWILQFCQ
PQHLNLSTDMAISLS
>EGAD|118458|126685/16-764
KLSVKFPFEP.Y.....ECQRIFMKNVVDVLDRKLDAAL.....ESPTGTGKTL....................SLLCST
LAWVQRQK...........ETKPLDFATWQTSGAGGAEKTDEKLKSAYVPTIFYASRTHSQLEQVVHELNRTEYKWVKTT
ILGSREHFCINQKVKKIKESNRQAHVCRGLVSKRACHYYNKFDACTTD...KMTEFLDKGEAMDIEDFVKLGTQNSLCPY
FMSRQRSETAELILLPYNYIIDPKMRRRYKLDLKN....SIVIFDEAHNLESICESNAS...AELTSTSIALCIEELKKV
LALLVDEEETARSEADAETGAFGSAKIDLTKKLIENLRTEDLMTVLEKIFSLEEEMDKLFGSSQLKSVPPLSGKASDGEI
LLETLAKAGFDANSVERLVDVLRDAISYLLSKNEEVALTEKGDGMEKVADFLLSIYSTHAQDVAAAVGEETVKLVDRVDP
KTVARNCKLYIQKDKDNEKLTIKYFCFQASISMRMLKMRGVRNVLLASGTLSPIQAFTYNMGLNFGAILEN.....EHAL
KQVPVLTSIVTRGK.RGGLAGSFQNRKNLDYVTG.VAEALLRVMEVIP..QGILIFFSSYSQMDELVATWKTTKWSSNSN
ESFWEKMEKTKRVVVEPRAK..EELAAIRLRYTQGVSEQHGAALLAVCRGKVSEGIDFCDAESRAVIIIGIPYPPIHDER
VVLKKMYLDDLMGRKDTKSERQSSQ..DWYQMEAFRAVNQAIGRVLRHKDDFGTVVLMDTRYAS.AKPEMFPKWLRNTIS
RSDTDGCALKTSRFF
>GP|3878642|emb|CAA88959.1/121-838
ARRGMVEVSR........KRKAPARDTDQFLEPQDEAAPS....EEYNNDEKSEK.........QRD.......SDFFDD
VDEEEEKPL..........KCLKIFYASRTHSQLEQLAEELAKTR..FQPRIVTCASRGTLCVNEEVKKLKLNHLINEKC
MELRKNGMSEKEKVQKLEKGTTKKTKT....CATSCEFYNSTQIED......VVNGVLSNKLKSTLEVSKQGKLSNGCPY
FATRKSVPQCQLVLLPYQVLLHDGTRKAWGIELKD....NVIVLDEAHNVLNTISSFFFRKLEKVSKNGFKNCSLYSAEI
STKSLTLALRLIREYNAHY......KLKLLAHNLLYMKQLESLTSKMLIFLNSQSKEDVMTM...AQLARNLNILEINLF
KLAEYMEKTDLCKKFHGFYMRLQKEEIKKENEKPKLTG.IQKLMAAKEAEPEPEAEPLPPPKPVP.SPLFSLKSFIDALT
NKCEDGRIIVE...KSATEAKFRFMLLNPADRLSEVVTS.ARATILVGGTMEPAQLLVETLSRGSIGADSIRRFSCCHVI
DDSQLLAVTVERTVDGKPFQLTYQTRGADTTLRS.LATSIQALIPHIP..NGVVIFVPSYDFLFNFQKKMKEFGILKR..
......IEEKKAVFTESR....QPTSDVWDRFSRAAKTSKGAILFAVVGGKMSEGINFCDELGRAVIVIGLPYP......
NKTSVELRERMKFLDTQMPNGGN....LLYESLCMHAVNQAIGRAIRHRRDYAAVYLFDDRYAKESTRRKLSTWIGDRTQ
VKLGFG...EIIRKT
>GP|2408082|emb|CAB16287.1/131-833
NSTTYHRETKRRNINAEASTSDNCNNSNTSVDPMDEYLVTAEY.TMPSTSEQSED.........LFNNGYSSKVSELLRK
LSPDNEKPP..........IVQKIYFTSRTHSQLQQLVQEIKKLN.....NQTFSTP.IRVVSLASRKNLCINNEVRKLR
PTSALNEKCIELQGSAHK.................CPFLQDNTQLW......DFRDEALAEIMDIEELVELGQRLKVCPY
YGTREAVDSAQIVTLPYPLLLQESARNALNLTLKD....NICIIDEAHNLIDAICSMHS...SSISFRQVCIAETQLQQY
FLRFEKRL.....NGNNRM......HIKQLIKVVYNLKSFFLNC.....LETNTN.SKVINV...DSLLVSNGADQINLH
HLSEYLNVSKLARKVDGYT.KYMHSLGTQELESLNDLR......SERFSNGNGY....EEDPYTP..VLMQLESFLLNIA
NPAPEGKLFYE..KQTGDNPYLKYLLLDPSKHVEILTEQ.CRSVNLAGGTMSPIDDFITLLFSDEQSRILP..FSCDHIV
PPENITTILVSQGPAGVPFEFTHKRKDDENLLKD.LGRTFQNFISIIP..DGVVVFFPSFAFLQQAVKVWEMNGITNR..
......LNAKKPLFIESKDFG.DNPLDTFEHYKQSVDAGLSGMLFSVIGGRLSEGINFSDKLGRAVMVVGMPFPNSQDVE
WQAKVSYVEEKAKEKGINAKQAS.Q..EFYENTCMRAVNQSIGRAIRHRDDYASIILLDSRYNRSSIQRKLPNWLSKNIH
SSPNFG...PAIRQL
>SP|P22516|CHL1_YEAST/136-849
EHGRYKSVDPLR......KKRKGARHLDVSLEEQDFIPRPYESDSENNDTSKSTRGGRISDKDYKLSELNSQIITLLDKI
DGKVSRDPNNGDRFDVTNQNPVKIYYASRTYSQLGQFTSQLRLPSFPSSFRDKVPDEKVKYLPLASKKQLCINPKVMKWK
TLEAINDACADLRHSKEG.................CIFYQNTNEWRHCPDTLALRDMIFSEIQDIEDLVPLGKSLGICPY
YASREALPIAEVVTLPYQYLLSESTRSSLQINLEN....SIVIIDEAHNLIETINSIYS...SQISLEDLKNCHKGIVTY
FNKFKSRL.....NPGNRV......NLLKLNSLLMTLIQFIVKN......FK..KIGQEIDP...NDMFTGSNIDTLNIH
KLLRYIKVSKIAYKIDTYN....QALKE...EE...........SSKNENPIKE...THKKSVSSQPLLFKVSQFLYCLT
NLTSEGQFFFE......KNYSIKYMLLEPSKPFESILNQ.AKCVVLAGGTMEPMSEFLSNLLPEVPSEDITT.LSCNHVI
PKENLQTYITNQPE....LEFTFEKRMSPSLVNNHLFQFFVDLSKAVPKKGGIVAFFPSYQYLAHVIQCWKQNDRFAT..
......LNNVRKIFYEAKDG.....DDILSGYSDSVAEGRGSLLLAIVGGKLSEGINFQDDLCRAVVMVGLPFPNIFSGE
LIVKRKHLAAKIMKSGGTEEEASRATKEFMENICMKAVNQSVGRAIRHANDYANIYLLDVRYNRPNFRKKLSRWVQDSIN
SEHTTH...QVISST
>OMNI|NTL01PH00720/2-632
EELQYFPYEKFR.....PNQREFIEIVKEAVKRGENLIV.....EAPTGFGKTI....................SVLAGV
LPYAISLG.............YKVVYLARTHKQMDRVIEELRKIG......EKSEVS...GIEFRSRKDLCLHAYIQTFA
QDAYTSMIVCKSLRKLGK.................CKYYENLKEKRDR..VDEIVKFFLSFPPFPREVIEYSELLELCPY
EITKKVGEKANVVVASYLYMISPPIRQAFLENLGVDYSDLIVIFDEAHNLPDQAISALS...DRLSVRSIERAIKEAEEY
GEKDIENF..................LSILLRGLEILYKEKLEN...........YESEEIP.........IRPEEVFLH
PASILGWRGRDIGMMLEDMIEVGDAIRE.................DRIERNLPP......RSYVGRVGEFLWNWLSLRDR
EDYLHLFTKEK.......GLALELVALDPSVALDFLEEV..HSAIFMSGTLSPLEAFRDIIGVNARLKKFP......RIV
KRENAIVLVARDVS.......TRGIERSPPLYKR.IAEYIFEAVKNTP..KNVGVFTASYEVLEGVLSTNVHIKIEEE..
........VGKKVFIEKKDAPSRENDEMIREFK.EESKGKGAVLFGVMGGRNSEGQDYSGDEMNGVILVGIPY.......
ARPTPRVQAQTRYFEKKFPGKGR...YYGYILPAHRKLAQAAGRVHRSENEKGSIVILDYRVLWKNVKKDLPDWMVETMI
PVTLPT...LRIKLR