HMM Seed Alignment: TIGR00621

Download Alignment

>EGAD|13646/2-178
.........................ASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKAT.....GEMKE
QTEWHRVVLFGK.LAEVASEYLRKGSQVYIEGQLRTRKWTDQ.SGQDRYTTEVVVNVG.GTMQML........GGRQGGG
APAGGNIGGGQPQGGWGQPQQ.......................PQGGNQFSGG.AQSRPQQS..........A....PA
....AP.......SNEPPMDFDDDIPF
>GP|1490779|gb|AAB57884.1/1-226
........................MASRGVNKVILVGNLGKDPEVRYMPNGNAVANFTVATSESWKDQQ......GQP
QERTEWHNIVMYRR.LAEIAGEYLKKGSKIYIEGKLQTSKWQDQATGQDRYKTEINASEM.QMLDSR.....GQGGGQQG
GG.DYGQQQNQYN.APQQQAPQQGYAPKPQSAPQQPAYAPKPQSAPQQPAQQQ.GGYQSQGQQPQ.APAYAPKPQAAPQQ
RPAPAPQQAAPQQNFTPDLDDGWDDDIPF
>SP|P40947|SSB_PSEAE/1-165
........................MA.RGVNKVILVGNVGGDPETRYMPNGNAVTNITLATSESWKDKQT.....GQQ
QERTEWHRVVFFGR.LAEIAGEYLRKGSQVYVEGSLRTRKWQGQ.DGQDRYTTEI.......VVDIN........GNMQL
LG...GRPSGDD....SQRAPREP.....................M....QRP.....QQAPQQQ......SRPA..PQQ
QPAPQPAQ.........DYDS.FDDDIPF
>SP|P44409|SSB_HAEIN/1-168
..........................MAGINKVIIVGHLGNDPEIRTMPNGDAVANISVATSESWNDRNT.....GER
REVTEWHRIVFYRR.QAEICGEYLRKGSQVYVEGRLKTRKWQDQ.NGQDRYTTEIQG....DVMQML........GGRNQ
NAGGYGNDMGG........APQSS.....................YQARQTNNGNSYQSSRPAPQ...............
QAAPQAEP..........PMDGFDDDIPF
>SP|Q07432|SSB_BRUAB/1-168
.........................MAGSVNKVILVGNLGADPEIRRLNSGDMVANLRIATSESWRDRQT.....GER
KDRTEWHSVVIFNENLAKVAEQYLKKGAKVYIEGALQTRKWQDQ.NGNDRYSKEIVLQKFRGELQMLD.......SRSEG
GEGRSFGGGGN........RNQMS........................DYSGGGGDFGSSGPSSG...............
..............SSGGFSRDLDDEIPF
>SP|P71711|SSB_MYCTU/1-164
..........................VAGDTTITIVGNLTADPELRFTPSGAAVANFTVASTPRIYDRQT.....GEW
KDGEALFLRCNIWREAAENVAESLTRGARVIVSGRLKQRSFETR.EGEKRTVIEVEVDEIGPSLRYAT.......AKVNK
ASRSGGFGSGS........RPAP.......................AQTSSASGDDPWGSAPASG...............
..................SFGGGDDEPPF
>SP|P37455|SSB_BACSU/1-172
............................MLNRVVLVGRLTKDPELRYTPNGAAVATFTLAVNRTFTNQS........G
EREADFINCVTWRR.QAENVANFLKKGSLAGVDGRLQTRNYENQ.QGQRVFVTEVQAESV.QFLEPKNGGGS.....GSG
GYNEGNSGGGQYFGGGQNDNPFG.....................GNQNNQRRNQGNSFNDDPFANDGK............
..................PIDISDDDLPF
>GP|662792|gb|AAA79866.1/1-181
............................MINRVVLIGRLTRDVELRYTQSGTAVGTFSLAVNRQFTNQA........G
EREADFINAVIWRK.AAENFANFTGKGALVAIEGRLQTRNYENN.QGQRVYVTEVVVDNF.SLLESRAESDKR...RAQN
GSSEPSHQGGASFG.APSDNAFGGVDPF..............ASASQANPQATTPTNDAPNPFAASGKT...........
..................EIDISDDDLPF
>SP|Q55499|SSB_SYNY3/1-121
...........................MSVNSIHLVGRAGRDPEVKYFESGNVVCNFTLAVNRRTSKKD........E
PP..DWFDLEIWGK.TAEIAGNYVKKGSLIGIQGSLKFDHWEDRNSGTPRSKPVIRVN....NLDLLG.......SKRDN
AEATMNNYPEEF....................................................................
.............................
>SP|P28042|SSB_RAT/1-151
MFRRPVLQVFRQFVRQESEVASSLVLERSLNRVQLLGRVGQDPVMRQVEGKNPVTIFSLATNEMWRSGDNEAYQMGDV
SQKTTWHRISVFRPGLRDVAYQYVKKGARIFVEGKVDYGEYMDK.NNVRRQATTIIADN...IIFLS..........DQA
REKPLNG.........................................................................
.............................
>SP|Q04837|SSB_HUMAN/1-148
MFRRPVLQVLRQFVRHESETTTSLVLERSLNRVHLLGRVGQDPVLRQVEGKNPVTIFSLATNEMWRSGDSEVYQLGDV
SQKTTWHRISVFRPGLRDVAYQYVKKGSRIYLEGKIDYGEYMDK.NNVRRQATTIIADN...IIFLS..........DQT
KEKE............................................................................
.............................
>SP|O83101|SSB_TREPA/1-176
..........................MADVNHVVLVGRLTRDAELKYTSAGGALCRFSVAINRRRKSGD.......DW
VEEVNFFDIVLWGR.QGEVISQYLIKGKQVAVEGELRQSRWEQ..EGQSRSKVEISATNVQLLGSVLGG.....AARAED
GEFSSSRVAAES....TAGRVRG.....................TSSDSRSPTGDILGEKRGLDATSS............
.............LDEADFSSSDLDTVPF
>GP|3114758|gnl|PID|e1289699|Y1/1-183
............................MFNKVVLVGNLTRDIEMRYAQSGSAIGASAIAVTRRFTANG.......EKRE
ETCFIDISFYGR.TAEVANQYLTKGSKVLIEGRLRFEQWSDQ.NGQNRSKHSIQVENMEMLGNSN........APQQGGN
FGNNSFSNNNYSGNYENQSYDP.....................YMSENQNFNKAKANPAPQRN...............Q.
..NPQHEEKLKEIDIDAYDSDDTNLPF
>SP|O25841|SSB_HELPY/1-179
............................MFNKVIMVGRLTRNVELKYLPSGSAAATIGLATSRRFKKQD......GTL
GEEVCFIDARLFGR.TAEIANQYLSKGSSVLIEGRLTYESWMDQ.TGKKNSRHTITADSL.QFMDKKSDN.....PQANA
MQDSIMHENSNNAYPANHNAPSQDP..................FNQAYAQNAYAKENLQAQPSKYQN.............
...............SVPEINIDEEEIPF
>SP|O66475|SSB_AQUAE/1-147
............................MLNKVFIIGRLTGDPVITYLPSGTPVVEFTLAYNRRYKNQN......GEF
QEESHFFDVKAYGK.MAEDWATRFSKGYLVLVEGRLSQEKWEK..EGKKFSKVRIIAEN..VRLIN..........RPKG
AELQAEEEEE........VPPIE........................EEIEKLGKE..EEKPFTD...............
....................E..EDEIPF