HMM Seed Alignment: TIGR00813
Download Alignment>OMNI|NTL01EC03188/38-434
YFLGSRSMGGIVLAMTLTATYISASSFIGGPGAAYKYGLGWVLLAMIQLPAVWLSLGILGKKFAILARRYN..AVTLNDM
LFARYQS..RLLVWLASLSLLVAFVGAMTVQ........FIGGARLLETAAGIPYETGLLIFGISIALYTAFGGFRASVL
NDTMQ..GLVMLIGTVVLLIGVVHAAGG.LSNAVQTLQTIDPQLVTPQG................ADDILSPAFMTSFWV
LVC.FGVIGLPHT............AVRCISYKDSKAVHRGIIIGTIVVAILMFGMHLAGALGRAVI........PDLT.
........VPDLVIPTLMVKVLP..PFAAGIFLAAPMAAIMSTINAQLLQSSATIIKDLYLNIRPDQMQNETRLKRMSAV
ITLVLGALLLL..AAWKPPEMIIWLNLLAFGGLEAVFLWPLVLGLYWERANAKGALSA..MIVG
>SP|P44963|PANF_HAEIN/36-432
YYVGNRSMTGFVLAMTTASTYASASSFVGGPGAAYKYGLGWVLLAMIQVPVVWLALGALGKKFALLSRETN..ALTINDL
FFYRYKN..KYLVWLSSLALLLAFFAAMTVQ........FIGGARLLETTIGISYTQALLLFALTVGIYTFIGGFRAVVL
TDTIQ..GTVMIFGTIILLIGTIYALGG.VESAVNKLTEIDPDLVTPYG................PNGMLDFQFMASFWI
LVC.FGVVGLPHT............AVRCMAFKDSKALHRGMLIGTIVLSIIMLGMHLAGALGRAVI........PNLT.
........VSDQVIPTLMIKVLP..PIVAGIFLAAPMSAIMSTIDAQLIQSSSIFVKDLYLSAKPEAAKNEKKVSYFSSI
ITLILTALLIF..AALNPPDMIIWLNLFAFGGLEAAFLWVIVLGIYWDKANAYGALSS..MIIG
>SP|P07117|PUTP_ECOLI/35-437
YILGGRSLGPFVTALSAGASDMSGWLLMGLPGAVFLSGISESWIAIGLTLGAWINWKLVAGRLRVHTEYNNN.ALTLPDY
FTGRFEDKSRILRIISALVILLFFTIYCASG........IVAGARLFESTFGMSYETALWAGAAATILYTFIGGFLAVSW
TDTVQ..ASLMIFALILTPVIVIISVGG.FGDSLEVIKQ..KSIEN...................VDMLKGLNFVAIISL
MGWGLGYFGQPHI............LARFMAADSHHSIVHARRISMTWMILCLAGAVAVGFFGIAYFND.....HPALAG
AVN....QNAERVFIELAQILFN..PWIAGILLSAILAAVMSTLSCQLLVCSSAITEDLYKAFLRKHAS.QKELVWVGRV
MVLVVALVAIA..LAANPENRVLGLVSYAWAGFGAAFGPVVLFSVMWSRMTRNGALAG..MIIG
>GP|152490|gb|AAA26389.1/35-437
YILGGRSLGPFVTALSAGASDMSGWLLMGLPGAIFLSGISESWIAIGLTLGAWINWKLVAGRLRVHTEFNNN.ALTLPDY
FTGRFEDKSRVLRIISALVILLFFTIYCASG........IVAGARLFESTFGMSYETALWAGAAATIIYTFIGGFLAVSW
TDTVQ..ASLMIFALILTPVMVIVGVGG.FSESLEVIKQ..KSIEN...................VDMLKGLNFVAIISL
MGWGLGYFGQPHI............LARFMAADSHHSIVHARRISMTWMILCLAGAVAVGFFGIAYFNN.....NPALAG
AVN....QNSERVFIELAQILFN..PWIAGVLLSAILAAVMSTLSCQLLVCSSAITEDLYKAFLRKSAS.QQELVWVGRV
MVLVVALIAIA..LAANPDNRVLGLVSYAWAGFGAAFGPVVLFSVMWSRMTRNGALAG..MIIG
>SP|P45174|PUTP_HAEIN/35-441
YILGGRRLGSFVTAMSAGASDMSGWLLMGLPGAVYLSGLVEGWIAIGLTIGAYFNWLLVAGRLRVYTELNNN.ALTLPEY
FHNRFGSSHKLLKLVSATIILVFLTIYCASG........VVAGAKLFQNIFSVEYSTALWYGAAATIAYTFIGGFLAVSW
TDTIQ..ATLMIFALILTPVFVLLSFAD.TAQFSAVLEQA.EAAVNKDF................TDLFTSTTPLGLLSL
AAWGLGYFGQPHI............LARFMAADSVKSLIKARRISMGWMVLCLAGAIGIGLFAIPYFFA.....NPAIAG
TVN....REPEQVFIELAKLLFN..PWIAGILLSAILAAVMSTLSAQLLISSSSITEDFYKGFIRPNAS.EKELVWLGRI
MVLVIAALAIW..IAQDENSKVLKLVEFAWAGFGSAFGPVVLFSLFWKRMTSSGAMAG..MLVG
>SP|P39599|YWCA_BACSU/36-437
FYTAGGGLTGVQNGLAIAGDYMSAASFLGIAGMIALYG.....FDGFFYSIGFLVAYLVVLYIVAEPLRNLG.KYTMADM
IAARFKE..KKIRGVAALNTIAISTFYMIAQ........LVGAGALIKLLLGLDYTAAVLIVGVLMTIYVVFGGMIATSW
VQIIK..AVLLMAGTLVISIIVFSKFGFSLNTMFEQMKTATPLGADFLN................PGNKYKVPLETLSLN
LALVLGTAGLPHI............LIRFYTVKDAKTARTSVVSATWIIGVFYIMTVFLGFGAAAFVG......FDAITA
AD.....QAGNMAAPLLAKALGG..DFLFAFVSAIAFATILAVVTGLVLSAASAFAHDIYSQIIRKGEATEKEQMKAARW
ASVAVSVLSIL.LAIFAQSLNVAFLVALAFAVAASANLPLIVFTVFWKRFNASGALWG..SLTG
>SP|P13866|SL51_HUMAN/58-492
FFLAGRSMVWWPIGASLFASNIGSGHFVGLAGTGAASG.....IAIGGFEWNALVLVVVLGWLFVPIYIKAG.VVTMPEY
LRKRFGG.QRIQVYLSLLSLLLYIFTKISAD........IFSGAIFINLALGLNLYLAIFLLLAITALYTITGGLAAVIY
TDTLQ..TVIMLVGSLILTGFAFHEVGG.YDAFMEKYMKAIP..TIVSD...GNTTFQEKCYT.PRADSFHIFRDPLTGD
LPWPGFIFGMSILT.LWYWCTDQVIVQRCLSAKNMSHVKGGCILCGYLKLMPMFIMVMPGMISRILYTEKIACVVPSECE
KYCGTKVGCTNIAYPTLVVELMP..NGLRGLMLSVMLASLMSSLTSIFNSASTLFTMDIYAKVRKRASEKELMIAGRLFI
LVLIGISIAWVPIVQSAQSGQLFDYIQSITSYLGPPIAAVFLLAIFWKRVNEPGAFWG..LILG
>SP|P53791|SL51_SHEEP/58-492
FFLAGRSMVWWPIGASLFASNIGSGHFVGLAGTGAAAG.....IATGGFEWNALILVVLLGWVFVPIYIKAG.VVTMPEY
LRKRFGG.QRIQVYLSVLSLVLYIFTKISAD........IFSGAIFINLALGLDLYLAIFILLAITALYTITGGLAAVIY
TDTLQ..TVIMLLGSFILTGFAFHEVGG.YSAFVTKYMNAIP..TVTSY...GNTTVKKECYT.PRADSFHIFRDPLKGD
LPWPGLIFGLTIIS.LWYWCTDQVIVQRCLSAKNMSHVKAGCIMCGYMKLLPMFLMVMPGMISRILFTEKVACTVPSECE
KYCGTKVGCTNIAYPTLVVELMP..NGLRGLMLSVMLASLMSSLTSIFNSASTLFTMDIYTKIRKKASEKELMIAGRLFM
LVLIGVSIAWVPIVQSAQSGQLFDYIQSITSYLGPPIAAVFLLAIFCKRVNEPGAFWG..LIIG
>SP|P26429|SL51_PIG/1-435
FFLAGRSMVWWPVGASLFASYIGSGHFVGLAGTGAAAG.....IATGGFEWNALIWVVVLGWLFVPIYIKAG.VVTMPEY
LRKRFGG.KRIQVYLSILSLMLYIFTKISAD........IFSGAIFITLALGLDLYLAIFLLLAITGLYTITGGLAAVIY
TDTLQ..TAIMLVGSFILTGFAFHEVGG.YDAFIEKYMNAIP..TVISD...GNITIKKECYA.PRADSFHIFRDPLKGD
LPWPGLTFGLSILA.LWYWCTDQVIVQRCLSAKNMSHVKAGCVMCGYFKLLPMFVIVMPGMISRVLYTEKIACTVPSECE
KYCGTKVGCSNIAYPTLVVELMP..NGLRGLMLSVILASLMSSLTSIFNSATTLFTMDVYAKIRKRASEKELMIAGRLFI
LVLIGISIAWVPIVQSAQSGQLFDYIQSVTSYLGPPIAAVFLLAIFCKRVNEEGAFWG..LVIG
>gi|3036983|gb|AAC12910.1/1-347
.......MVWWPIGPSLFASNIGSGHFVGLAGTGAAAG.....IAMGGFEWNALVLVVVLGWIFVPIYIKAG.VVTMPEY
LRKRFGG.KRIQIYLSVLSLLLYIFTKISAD........IFSGAIFINLALGLDIYLAIFILLAITALYTITGGLAAVIY
TDTLQ..TAIMLVGSFILTGFAFNEVGG.YEAFMDKYMKAIP..TKVSN...GNFTAKEECYT.PRADSFHIFRDPITGD
MPWPGLIFGLAILA.LWYWCTDQVIVQRCLSAKNMSHVKAGCTLCGYLKLLPMFLMVMPGMISRILYTEKIACVLPEECQ
KYCGTPVGCTNIAYPTLVVELMP..NGLRGLMLSVMMASLMSSLTSIFNSASTLFTMDIYT...................
................................................................
>SP|P31636|SL54_PIG/58-492
FFLAGRDVTWWPMGASLFASNIGSGHFVGLAGTGAASG.....IAIAAFEWNALLLLLVLGWFFVPIYIKAG.VMTMPEY
LRKRFGG.KRLQIYLSILSLFICVALRISSD........IFSGAIFIKLALGLDLYLAIFSLLAITAIYTITGGLASVIY
TDTLQ..TIIMLIGSFILMGFAFVEVGG.YESFTEKYMNAIP..TIVEG...DNLTISPKCYT.PQGDSFHIFRDAVTGD
IPWPGMIFGMTVVA.AWYWCTDQVIVQRCLSGKDMSHVKAACIMCGYLKLLPMFLMVMPGMISRILYTEKVACVVPSECV
KHCGTEVGCSNYAYPLLVMELMP..SGLRGLMLSVMLASLMSSLTSIFNSASTLFTMDLYTKIRKQASEKELLIAGRLFI
ILLIVISIVWVPLVQVAQNGQLFHYIESISSYLGPPIAAVFLLAIFCKRVNEQGAFWG..LIIG
>SP|P26430|SL52_RABIT/55-491
YFLAGRSMVWWPVGASLFASNIGSGHFVGLAGTGAANG.....LAVAGFEWNALFVVLLLGWLFAPVYLTAG.VITMPQY
LRKRFGG.HRIRLYLSVLSLFLYIFTKISVD........MFSGAVFIQQALGWNIYASVIALLGITMVYTVTGGLAALMY
TDTVQ..TFVIIAGAFILTGYAFHEVGG.YSGLFDKYMGAMTSLTVSEDPAVGN..ISSSCYR.PRPDSYHLLRDPVTGD
LPWPALLLGLTIVS.GWYWCSDQVIVQRCLAGRNLTHIKAGCILCGYLKLTPMFLMVMPGMISRILYPDEVACVAPEVCK
RVCGTEVGCSNIAYPRLVVKLMP..NGLRGLMLAVMLAALMSSLASIFNSSSTLFTMDIYT.LRPRAGEGELLLVGRLWV
VFIVAVSVAWLPVVQAAQGGQLFDYIQSVSSYLAPPVSAVFVVALFVPRVNEKGAFWG..LIGG
>SP|P31637|SL53_CANFA/39-477
YFLAGRSMTWVAIGASLFVSNIGSEHFIGLAGSGAASG.....FAVGAWEFNALLLLQLLGWVFIPIYIRSG.VYTMPEY
LSKRFGG.HRIQVYFAALSLILYIFTKLSVD........LYSGALFIQESLGWNLYVSVILLIGMTALLTVTGGLVAVIY
TDTLQ..ALLMIVGALTLMIISMMEIGG.FEEVKRRYMLASP..NVTSILLTYNLSNTNSCNVHPKKDALKMLRNPTDED
VPWPGFVLGQTPAS.VWYWCADQVIVQRVLAAKNIAHAKGSTLMAGFLKLLPMFIIVVPGMISRILFADDIACINPEHCM
QVCGSRAGCSNIAYPRLVMKLVP..VGLRGLMMAVMIAALMSDLDSIFNSASTIFTLDVYKLIRRSASSRELMIVGRIFV
AFMVVISIAWVPIIVEMQGGQMYLYIQEVADYLTPPVAALFLLAIFWKRCNEQGAFYG..GMAG
>gi|1794165|dbj|BAA11215.1/31-450
YFLAGKSLPWWAVGASLIAANISAEQFIGMSGSGYSIG.....LAIASYEWMSAITLIIVGKYFLPIFIEKG.IYTIPEF
VEKRFNK..KLKTILAVFWISLYIFVNLTSV........LYLGGLALETILGIPLMYSILGLALFALVYSIYGGLSAVVW
TDVIQ..VFFLVLGGFMTTYMAVSFIGG.TDGWFAGVSKMVD...AAPG................HFEMILDQSNPQYMN
LPGIAVLIGGLWVANLYYWGFNQYIIQRTLAAKSVSEAQKGIVFAAFLKLIVPFLVVLPGIAAYVITSDPQLMASLGDIA
ATNLPSAANADKAYPWLT.QFLP..VGVKGVVFAALAAAIVSSLASMLNSTATIFTMDIYKEYISPDSG.DHKLVNVGRT
AAVVALIIACLIAPMLGGIGQAFQYIQEYTGLVSPGILAVFLLGLFWKKTTSKGAIIG..VVAS
>SP|P31448|YIDK_ECOLI/35-443
YFLAGRSLKAPVIAASLMLTNLSTEQLVGLSGQAYKSG.....MSVMGWEVTSAVTLIFLALIFLPRYLKRG.IATIPDF
LEERYDKTTRIIIDFCFLIATGVCFLPIVLYSGALALNSLFHVGESLQISHGAAIWLLVILLGLAGILYAVIGGLRAMAV
ADSIN..GIGLVIGGLMVPVFGLIAMG..KGSFMQGIEQLTT.......................VHAEKLNSIGGPTDP
LPIGAAFTGLILVN.TFYWCTNQGIVQRTLASKSLAEGQKGALLTAVLKMLDPLVLVLPGLIAFHLYQD...........
...LP...KADMAYPTLVNNVLP..VPMVGFFGAVLFGAVISTFNGFLNSASTLFSMGIYRRIINQNAEPQQLVTVGRKF
GFFIAIVSVLVAPWIANAPQGLYSWMKQLNGIYNVPLVTIIIMGFFFPRIPALAAKVA..MGIG
>gi|1628579|gb|AAB17378.1/47-452
FFTGGRRLAALPVGLSLSASFMSAVQVLGVPSEAYRYG.....LKFLWMCLGQLLNSVLTALLFMPVFYRLG.LTSTYEY
LEMRFSR...AVRLCGTLQYIVATMLYTGIV........IYAPALILNQVTGLDIWASLLSTGIICTFYTAVGGMKAVVW
TDVFQ..VVVMLSGFWVVLARGVMLVGG.PRQVLTLAQNHSR........................INLMDFNPDPRSRY
TFW.TFVVGGTLVWLSMYG.VNQAQVQRYVACRTEKQAKLALLINQVGLFLIVSSAACCGIVMFVFYTD....CDPLLLG
RIS.....APDQYMPLLVLDIFEDLPGVPGLFLACAYSGTLSTASTSINAMAAVTVEDLIKPRLRSLAPRKLVIISKGLS
LIYGSACLTVA.ALSSLLGGGVLQGSFTVMGVISGPLLGAFILGMFLPACNTPGVLAG..LGAG
>gi|3015617|gb|AAC12270.1/58-462
LLMADRKMGCLPVALSLLATFQSAVAILGGPAEIYRFG.....TQYWFLGCSYFLGLLIPAHIFIPVFYRLH.LTSAYEY
LELRFNK...AVRICGTVTFIFQMVVYMGVA........LYAPSLALNAVTGFDLWLSVLALGIVCNIYTALGGLKAVIW
TDVFQ..TLIMFLGQLVVIIVGAAKVGG.LGHVWAVASQHGL........................ISGIELDPDPFVRH
TFW.TLAFGGVFMMLSLYG.VNQAQVQRYLSSHSEKAAVLSCYAVFPCQQVALCMSCLIGLVMFAYYKKYS..MSPQQE.
Q......AAPDQLVLYFVMDLLKDMPGLPGLFVACLFSGSLSTISSAFNSLATVTMEDLIQPWFPQLTETRAIMLSRSLA
FAYGLVCLGMA..YVSSHLGSVLQAALSIFGMVGGPLLGLFCLGMFFPCANPLGAIVG..LLTG
>gi|1763254|gb|AAB39701.1/59-461
YLRGGKKMQTLPIAISLVASQLSGIAIMSIPAESYTYG.....FNYIFVVLAMLVVIPILIYIIVPVFYENN.VSNCYEY
LEMRFNK...RTRQLVTFFFVTNSFLMLPVY........MFIPSLAFAQVTGMNIHLINVMVSSICIFYTMLGGIKAVVW
TDVVQ..GAIMLLSVVAVGVLGTIRSGG.MFTVMERASDGGR.........................FNFDFGLDPRIRM
TFWGATMGGIFMWT..GHIGLNQSCVQRIVSLPSYSHAKKSLIVSGLGFLIISFFNTISGIIMFARYYG....CDPMLAG
LVS.....KPDKMMPFFVQDIMGHLAGMPGVFISCVFSAALSSLSATLNSLAGVVYFDYIKPRIRHTEA.RANWAMKLIV
VVMGGYCILGG..FMVQNFNSILQTVVTITGINTGAVVGVFLLGMFVPRCNAKTAVTS..IIVS
>SP|P33413|DUR3_YEAST/48-467
FTTAGRSVKTGLVAAAVVSSWIWCSTLLTSSTKEYADG....IFGGYAYAAGACFQIIAFAILAIKTKQMAPNAHTYLEL
VRTRYGK...IGHGCYLFYAIATNILVTSML........LTSGSAVFSDLTGMNTIASCFLLPVGVVVYTLFGGIKATFL
TDYMHTCVIIIIVLVFAFKVYATSDVLGSPGKVYDLVREAAKR...HP.................VDGNYQGEYMTMTSK
SAGILLIINLIGN..FGTVFLDNGYWNKAISASPAASLKAYAIGGLAWFAVPSLISLTMGLACLAVETSPNFPTYPDPLT
SFQ....ANSGLVLPAAAIAIMG..KGGAVASLLMIFMAVTSAMSAELIAVSSVFTYDIYREYIDPRASGKKLIYTSHVA
CIFFGLAMSGFS.VGLYYGGISMGYIYEMMGIIISSAVLPVVLTLCSKDMNLVAAVVSPILGTG
>gi|2984319|gb|AAC07841.1/19-419
LAYIMGWTGGYVLLALLIAPYLRKFGKFTVPDFIAERY......ESNFARLVALIIAIIISFTYMVGQVAGV.GIIMGRL
FGVPFEIG..IAIGMIVIIATTVLGGMKSIT........WTQVAQYIVLITAYLLPVSLLAMQWFGIPLPQFLYGNVLQW
IVDLE..KQHGISPHYIEPYVKFNMIQFLALMFVLMAGTAAL.......................PHVLMRFFTTPSVKD
ARWSAGWALFFIA............ILYLTAPAYAAFARYVVLKDVVGKPIDQLPAWAQKWAETGLFKV....IDQNGDG
IIQWAELQLHRDIVVLATPEIAGLSLLVGYFVMAGGLAAALSTADGLLLVIAAAVSNDLYAKMINPNAP.EKKIVMLGKI
AVAVAGVIGGF..VAAMKIGFIVQIVAWAFSLATASFFPALVLGIFWKRLNKEGAIAG..MVAG