HMM Seed Alignment: TIGR00820

Download Alignment

>gi|3252870|gb|AAC24199/38-339
CSHEDD...HENKAGARKYKIAAIPTVLIAGIIGVLFP.LLGKVFPSLRPETCFFFVTKAFAAGVILATGFMHVLPEAYE
ML.NSPCLIS..EAWEFPFTGFIAMIAAILTLSVDTFATSSFYKSHCK.........ASKRVSD..............GE
TGESS...................................VDS...EKVQILRTRVIAQVLELGIIVHSVVIGISLGASQ
SPDAAKALFIALMFHQCFEGLGLGGCIAQGKFKCLS...VTIMSTFFAITTPIGIVVGMGIAN..SYDESSPTALIVQGV
LNAASAGILIYMSLVDLLAADFTHPKM.....QSNTGLQIMAHIALLLGAGLMSLLAKWA
>gi|3831472|gb|AAC69954/38-339
CSHEDD...HENKAGARKYKIAAIPTVLIAGIIGVLFP.LLGKVFPSLRPETCFFFVTKAFAAGVILATGFMHVLPEAYE
ML.NSPCLTS..EAWEFPFTGFIAMIAAILTLSVDTFATSSFYKSHCK.........ASKRVSD..............GE
TGESS...................................VDS...EKVQILRTRVIAQVLELGIIVHSVVIGISLGASQ
SPDAAKALFIALMFHQCFEGLGLGGCIAQGKFKCLS...VTIMSTFFAITTPIGIVVGMGIAN..SYDESSPTALIVQGV
LNAASAGILIYMSLVDLLAADFTHPKM.....QSNTGLQIMAHIALLLGAGLMSLLAKWA
>gi|2388566|gb|AAB71447/33-360
CSHEDD...EANKAGAKKYKIAAIPSVLAAGVIGVMFP.LLGKFFPSLKPETTFFFVTKAFAAGVILATGFMHVLPEGYE
KL.TSPCLKG..EAWEFPFTGFIAMVAAILTLSVDSFATSYFHKAHFK.........TSKRIGD..............GE
EQDAGGGGGGGDELGLHV...........HAHGHTHGIVGVESG.ESQVQLHRTRVVAQVLEVGIIVHSVVIGISLGASQ
SPDTAKALFAALMFHQCFEGLGLGGCIAQGNFNCMS...ITIMSIFFSVTTPVGIAVGMAISS..SYDDSSPTALIVQGV
LNAASAGILIYMSLVDFLAADFMHPKM.....QSNTRLQIMAHISLLVGAGVMSLLAKWA
>gi|3252866|gb|AAC24197/32-355
CTSHDDPVSQDEAEKATKLKLGSIALLLVAGGVGVSLP.LIGKRIPALQPENDIFFMVKAFAAGVILCTGFVHILPDAFE
RL.SSPCLEDT.TAGKFPFAGFVAMLSAMGTLMIDTFATGYYKRQHFSN......NHGSKQVNVV............VDE
EEHAG...........HV...........HIHTHAS...HGHT..HGSTELIRRRIVSQVLEIGIVVHSVIIGISLGASQ
SIDTIKPLMAALSFHQFFEGLGLGGCISLADMKSKS...TVLMATFFSVTAPLGIGIGLGMSSGLGYRKESKEAIMVEGM
LNAASAGILIYMSLVDLLATDFMNPRL.....QSNLWLHLAAYLSLVLGAGSMSLLAIWA
>gi|1353266|gb|AAB01678/26-339
CGSESAN.PCVNKAKALPLKVIAIFVILIASMIGVGAP.LFSRNVSFLQPDGNIFTIIKCFASGIILGTGFMHVLPDSFE
ML.SSICLEEN.PWHKFPFSGFLAMLSGLITLAIDSMATSLYTSKNAVG......IMPHGHGH.G............HGP
ANDVTL.................................PIKEDDSSNAQLLRYRVIAMVLELGIIVHSVVIGLSLGATS
DTCTIKGLIAALCFHQMFEGMGLGGCILQAEYTNMK...KFVMAFFFAVTTPFGIALGIALST..VYQDNSPKALITVGL
LNACSAGLLIYMALVDLLAAEFMGPKL.....QGSIKMQFKCLIAALLGCGGMSIIAKWA
>gi|3153889|gb|AAC17441/29-348
CETESTN.SCNNKEKALSLKIIAIFSILVTSMIGVCLP.LVSRSVPALSPDGNLFVIVKCFAAGIILGTGFMHVLPDSFD
ML.WSDCLQEK.PWHEFPFSGFAAMISAVVTMMVDSLATSYYTQKGKKG......VIIPAEGEVG............DQE
MGAVHAG........................HHHHY...QVKTE.GEESQLLRYRVIAMVLELGIVVHSIVIGLAMGSSN
NTCSIKGLVAALCFHQMFEGMGLGGCILQAEYKFVK...KAIMVFFFSITTPLGIAIGIAMSS..NYKENSPKALITVGL
LNGSSAGLLIYMALVDLLAADFMSRRM.....QGSIKLQLKSYVAVFLGAGGMSLMAKWA
>gi|1931645|gb|AAB65480/10-374
CDAGESD.LCRDDSAAFLLKFVAIASILLAGAAGVAIP.LIGRNRRFLQTEGNLFVAAKAFAAGVILATGFVHMLAGGTE
AL.SNPCLPDF.PWSKFPFPGFFAMVAALATLLVDFMGTQYYERKQERNQAATEAAAGSEEIAVVPVVGERVTDNKVFGE
EDGGGIHIVGIRAHAAHHRHSHSNSHGTCDGHAHGHSHGHMHGN.SDVENGARHVVVSQILELGIVSHSIIIGLSLGVSQ
SPCTIRPLIAALSFHQFFEGFALGGCISQAQFRNKS...ATIMACFFALTTPLGIGIGTAVAS..SFNSHSPGALVTEGI
LDSLSAGILVYMALVDLIAADFLSKRM.....SCNLRLQVVSYVMLFLGAGLMSALAIWA
>gi|3150412|gb|AAC16964/10-341
AAIRAAA..CRDGEEASHLKIVAVFAIFLTSVFGVWGPVLLAKYFHGKPLYDKAILVIKCFAAGVILSTSLVHVLPEAFE
SL.ADCQVSSRHPWKDFPFAGLVTMIGAITALLVDLTASEHMGHGGGGG.....GDGGMEYMPVG.........KAVGGL
EMKEG............................KCGADLEIQENSEEEIVKMKQRLVSQVLEIGIIFHSVIIGVTMGMSQ
NKCTIRPLIAALSFHQIFEGLGLGGCIAQAGFKAGT...VVYMCLMFAVTTPLGIVLGMVIFAATGYDDQNPNALIMEGL
LGSFSSGILIYMALVDLIALDFFHNKMLTTCGESGSRLKKLCFVALVLGSASMSLLALWA
>SP|P32804|ZRT1_YEAST/31-376
CVLQGVYFGGNEYNGNLGARISSVFVILFVSTFFTMFP.LISTKVKRLRIPLYVYLFAKYFGSGVIVATAFIHLMDPAYG
AIGGTTCVGQTGNWGLYSWCPAIMLTSLTFTFLTDLFSSVWVERKYGLS.....HDHTHDEIKDTVVRNTAAVSSENDNE
NGTANG....................SHDTKNGVEYYEDSDATSMDVVQSFQAQFYAFLILEFGVIFHSVMIGLNLGSVG
..DEFSSLYPVLVFHQSFEGLGIGARLSAIEFPRSKRWWPWALCVAYGLTTPICVAIGLGVRT..RYVSGSYTALVISGV
LDAISAGILLYTGLVELLARDFIFNPQR....TKDLRELSFNVICTLFGAGIMALIGKWA