HMM Seed Alignment: TIGR00852
Download Alignment>OMNI|NTL01EC03604/147-445
GWTVFRNMPLIFAVGLPIGLAKQAQGRACLAVMVSFLTWNYFINAMGMTWG......SYFGVDFTQDAVAGSGLTMMAG.
.......IKTLDTSIIGAIIISGIVTALHNRLFDKKLPVFLGIFQGTSYVVIIAFLVMIPCAWLTLLGWPKVQMGIESLQ
AFLRSAG.ALGVWVYTFLERILIPTGLHHFIYGQFIFG..PAAVEGGIQMYWAQHLQEFSLSAEPLKSLFPEGGFALHG.
...NSKIFGAV.GISLAMYFTAAPENRVKVAGLLIPATLTAMLVGITEPLEFTFLFISPLLFAVHAVL.AASMSTVMYLF
GV
>SP|P54715|PTIB_BACSU/59-357
GWTVFNQMPLLFAIGIPVALAKKAQARACLEALTVYLTFNYFVSAILTVWG......GAFGVDMNQEVGGTSGLTMIAG.
.......IKTLDTNIIGAIFISSIVVFLHNRYFDKKLPDFLGIFQGSTYIVMISFFIMIPIALAVSYIWPMVQSGIGSLQ
SFLVASG.AVGVWIYTFLERILIPTGLHHFIYTPFIYG..PAVAEGGIVTYWAQHLGEYSQSAKPLKELFPQGGFALHG.
...NSKIFGIP.GIALAFYVTAKKEKKKLVAGLLIPVTLTAIVAGITEPIEFTFLFISPFLFAVHAVL.AATMSTVMYMA
GV
>SP|P05053|PTGB_ECOLI/52-331
GGSVFANMPLIFAIGVALGFTN.NDGVSALAAVVAYGIMVKTMAVVAPLVL......HLPAEEIA.SKH.....LAD...
............TGVLGGIISGAIAAYMFNRFYRIKLPEYLGFFAGKRFVPIISGLAAIFTGVVLSFIWPPIGSAIQTFS
QWAAYQNPVVAFGIYGFIERCLVPFGLHHIWNVPFQMQ.IGEYTNAAGQVFHGDIPRYMAG.......DPTAG...KLS.
GGFLFKMYGLP.AAAIAIWHSAKPENRAKVGGIMISAALTSFLTGITEPIEFSFMFVAPILYIIHAIL.AGLAFPICILL
GM
>SP|P20166|PTGA_BACSU/64-365
GQIVFDNLPLLFAVGVAIGLAN.GDGVAGIAAIIGYLVMNVSMSAVLLANG......TIPSDSVERAKF.....FTENHP
AYVNMLGIPTLATGVFGGIIVGVLAALLFNRFYTIELPQYLGFFAGKRFVPIVTSISALILGLIMLVIWPPIQHGLNAFS
TGLVEANPTLAAFIFGVIERSLIPFGLHHIFYSPFWYE.FFSYKSAAGEIIRGDQRIFMAQIKDG..VQLTAGT..FMT.
GKYPFMMFGLP.AAALAIYHEAKPQNKKLVAGIMGSAALTSFLTGITEPLEFSFLFVAPVLFAIHCLF.AGLSFMVMQLL
NV
>SP|P45604|PTAA_KLEPN/45-311
GGAIFDNLALIFAIGVASSWSKDNAGSAALAGAVGYFVMTKAMVTINP..............EIN...............
............MGVLAGIITGLVAGAVYNRWAGIKLPDFLSFFGGKRFVPIATGFFCLILAAIFGYVWPPVQHAIHSGG
EWIVSAG.ALGSGIFGFINRLLIPTGLHQVLNTIAWFQ.IGEFTNAAGTVFHGDINRFYAG.......DGTAGM..FMS.
GFFPIMMFGLP.GAALAMYLAAPKARRPMVGGMLLSVAITAFLTGVTEPLEFLFLFLAPLLYLLHAVL.TGISLFIATAL
GI
>OMNI|BB0645/63-359
GSIIFSNLAPIFSIGIAVGLAKSDKGTSGIAAFIGYLVMNATIGVLIDVSG......RAESFSSGAVGF.....VLG...
.......IKTLETGVFGGVVVGILTYYLHSRFNKVDLPKVLGFFSGSRFVPIIVSFSSIFLAVIMFLVWPFVQSGINKVG
GLVDSTG.YIGTLIYGIFLRMLGPFGLHHIFYLPFWTTGLGGSVIIDGKLIEGTQNIFFAELAAQGTDRFFIGTSRFMS.
GRFITMMFGLP.GAALALYYTAKREERTKVFGLLMSSALTSFLTGITEPLEFSFLFVAPILYVVHATF.DGFAFMLAHIL
QI
>GP|146692|gb|AAA24098.1|M60722/70-372
GSFAFSFLPVMFCIAIPLGLARENKGVAAFAGFIGYAVMNLAVNFWLTNKG......ILPTTDAAVLKANNIQSILG...
.......IQSYDTGILGAVIAGIIVWMLHERFHNIRLPDALAFFGGTRFVPIISSLVMGLVGLVIPLVWPIFAMGISGLG
HMINSAG.DFGPMLFGTGERLLLPFGLHHILVALIRFTDAGGTQEVCGQTVSGALTIFQAQLSCPTTHGFSESATRFLSQ
GKMNAFLGGLP.GAALAMYHCARPENRHKIKGLLISGLIACVVGGTTEPLEFLFLFVAPVLYVIHALL.TGLGFTVMSVL
GV
>SP|P05306|PTSB_BACSU/153-438
SSAAFIFLPILIGVSASKEFGSNPYLGAVIGGIMIHPNLLNPWGLAEEQL.....ITCIFSDLISLFS............
...........ATGNCYPCPACGVCDEQGREMDEKSGSTCGDLLVTPFVTVIVTGFVAFIAIGPLGRALGS...GITVAL
TYVYDHAGFVAGLIFGGTYSLIVLTGVHHSFHAIEAGLIAD...IGKNYLLPIWSMANVAQGGAGLAVFFMAKKAKTKEI
ALPAAFSAFLG.ITEPVIFGVNLRYRKPFIAAMIGGALGGAYVVFTHVAANAYGLTGIPMIAIAAPFG.FSNLIHYLIGM
AI
>SP|P08470|PTSB_SALTY/153-437
SSAAFIILPILIGFTAAREFGGNPYLGATLGGILTHPALTNAWGVAAGFH.....TMNFFGFEIAMIG............
...........YQGTVFPVLLAVWFMSIVEKQLRRAIPDALDLILTPFLTVIISGFIALLIIGPAGRALGD...GISFVL
STLISHAGWLAGLLFGGLYSVIVITGIHHSFHAVEAGLLGNP.SIGVNFLLPIWAMANVAQGGACLAVWFKTKDAKIKAI
TLPSAFSAMLG.ITEAAIFGINLRFVKPFIAALIGGAAGGAWVVSVHVYMTAVGLTAIPGMAIVQ....ASSLLNYIIGM
VI
>SP|P22825|PTSB_VIBAL/163-453
ANAPFVYLPILLAFSASKKFGGNPYLGAALGMLMVHPDLLNGWGFGGASVSGNIPVWNILGFEIQKVG............
...........YQGSVLPVLVSAFILAKVELGLRKVIPSVLDNLLTPLLAIFIAGLLTFTVVGPFTRDIGF...LLGDGL
NWLYNTAGFVGGAVFGLIYAPFVITGMHHSFIAIETQLLADIATTGGTFIFPIAAMSNVSQGAAALAVGVMSKDKKMKGI
AIPSGVTGLLG.ITEPAMFGVNLKLRYPFIAAVCAAALSSAFITMFNVKAQALGAAGLPGIISITP....DKIGYYIAGM
VI
>GP|1000451|emb|CAA91014.1/164-452
AGTAFTFLPALIGWSAVKRFGGNPLLGIVLGVMLVHPDLLNAWGYGAAEQSGEIPVWNLFGLEVQKVG............
...........YQGQVLPILLASYMLAKIEVFLTKRTPEGIQLLVVAPITLLLTGFASFIIIGPITFAIGN...VLTSGL
ISVFGSFAALGGLLYGGFYSALVITGMHHTFLAVDLQLIGSK..LGGTFLWPMLALSNIAQGSAALALMFIVKDEKQKGL
SLTSGISAYLG.ITEPAIFGVNLRYRFPFIIAMVSSGLAGMYISSQGVLASSVGVGGVPGIFSIMS....QYWGAFAIGM
AI
>SP|P36672|PTTB_ECOLI/164-448
GEAIFFYLPVGICWSAVKKMGGTPILGIVLGVTLVSPQLMNAYLLGQQLP....EVWDFGMFSIAKVG............
...........YQAQVIPALLAGLALGVIETRLKRIVPDYLYLVVVPVCSLILAVFLAHALIGPFGRMIGDG..VAFAVR
HLMTGSFAPIGAALFGFLYAPLVITGVHQTTLAIDLQMIQS...MGGTPVWPLIALSNIAQGSAVIGIIISSRKHNEREI
SVPAAISAWLG.VTEPAMYGINLKYRFPMLCAMIGSGLAGLLCGLNGVMANGIGVGGLPGILSIQP....SYWQVFALAM
AI
>SP|P08722|PTBA_ECOLI/148-433
SDALFWFFPIILGYTAGKRFGGNPFTAMVIGGALVHPLILTAFENGQKADALG...LDFLGIPVTLLN............
...........YSSSVIPIIFSAWLCSILERRLNAWLPSAIKNFFTPLLCLMVITPVTFLLVGPLSTWISE...LIAAGY
LWLYQAVPAFAGAVMGGFWQIFVMFGLHWGLVPLCINN...FTVLGYDTMIPLLMPAIMAQVGAALGVFLCERDAQKKVV
AGSAALTSLFG.ITEPAVYGVNLPRKYPFVIACISGALGATIIGYAQTKVYSFGLPSIFTFMQTIP...STGIDFTVWAS
VI
>SP|P24241|PTDA_ECOLI/154-442
GDGAFFFLPLMVAHLPRIKFKTNMSLAIAIAGVLVHPSFIELMAKAAQGEH.....VEFALIPVTAVK............
...........YTYTVIPALVMTWCLSYIERWVDSITPAVTKNFLKPMLIVLIAAPLAILLIGPIGIWIGS...AISALV
YTIHGYLGWLSVAIMGALWPLLVMTGMHRVFTPTIIQTIAETG..KEGMVMPSEIGANLSLGGSSLAVAWKTKNPELRQT
ALAAAASAIMAGISEPALYGVAIRLKRPLIASLISGFICGAVAGMAGLASHSMAAPGLFTSVQFFDPANPMSIVWVFAVM
AL