HMM Seed Alignment: TIGR00868

Download Alignment

>GP|6002646|gb|AAF00077.1/1-863
MGSFRSSLFILVLHLLEGAQSNSLIQLNGNGYEGIVIAIDPNVPEDERLIQNIKDMVTKASPYLFEATEKRFYFKNVAIL
IPASWKAKPEYVKPKLETYKNADVVVTEPNPPENDGPYTEQMGNCGEKGEKIYFTPDFVAGKKVLQYGPQGRVFVHEWAH
LRWGVFNEYNNEQKFYLS.NKKEQPVICSAAIRGTNVLPQCQGGSCVTKPCRADRVTGLFQKECEFIPDPQQSEKASIMF
AQSIDTVVEFCKEKNHNKEAPNDQNQKCNLRSTWEVIQDSEDFKKTTPMTTQ..PPAPTFSLLQIGQRIVCLVLDKSGSM
TVGGRLKRLNQAGKLFLLQTVEQGAWVGMVAFDSAAYVKSELVQINSAAERDALARSLPTAASGGTSICSGLRSAFTVIK
KKYP.TDGSEIVLLTDGEDNTISACFPEVKQNGAIIHTVALGPSAAKELEELSQMTGGLQTYASDQAENNGLIDAFGALS
SGNRAASQRSIQLESQGLTLQNNEWMNGTVVVDSTVGKDTLFLITLERKFLSPIPFFGVPSGR..SQDSFLVGKHN.KMA
YFQVPGTAKVGMWKYSLQAS.S..QTLTLTVSSRRSSATLPPVTVTSKMNKDTGKFPSPMVVYTKIHQGTLPILRAKVTA
LIESENGKTVTLELLDNGAGADATKNDGIYSRYFTAYDANGRYSVKVWALGGVNTPRRRAPPLWSGAMYIRGWIENGEIK
WNPPRPDINKDDLQGKQVCFSRTASGGSFVASDVPK.SPIPDLFPPCKITDLKAGIQGDNLINLTWTAPGDDYDHGRADR
YIIRISTNILDLRDKFNDSVQVNTTDLIPKEANSEEVFVFKPEGIPFTNGTDLFIAVQAVDKTNLKSEISNIAQ
>GP|5726289|gb|AAD48398.1/1-862
MGLFRGFVFLLVLCLLHQSN.TSFIKLNNNGFEDIVIVIDPSVPEDEKIIEQIEDMVTTASTYLFEATEKRFFFKNVSIL
IPENWKENPQYKRPKHENHKHADVIVAPPTLPGRDEPYTKQFTECGEKGEYIHFTPDLLLGKKQNEYGPPGKLFVHEWAH
LRWGVFDEYNEDQPFYRAKSKKIEATRCSAGISGRNRVYKCQGGSCLSRACRIDSTTKLYGKDCQFFPDKVQTEKASIMF
MQSIDSVVEFCNEKTHNQEAPSLQNIKCNFRSTWEVISNSEDFKNTIPMVTP..PPPPVFSLLKIRQRIVCLVLDKSGSM
GGKDRLNRMNQAAKHFLLQTVENGSWVGMVHFDSTATIVNKLIQIKSSDERNTLMAGLPTYPLGGTSICSGIKYAFQVIG
ELHSQLDGSEVLLLTDGEDNTASSCIDEVKQSGAIVHFIALGRAADEAVIEMSKITGGSHFYVSDEAQNNGLIDAFGALT
SGNTDLSQKSLQLESKGLTLNSNAWMNDTVIIDSTVGKDTFFLITWN..SLPPSISLWDPSGT..IMENFTVDATS.KMA
YLSIPGTAKVGTWAYNLQAK.ANPETLTITVTSRAANSSVPPITVNAKMNKDVNSFPSPMIVYAEILQGYVPVLGANVTA
FIESQNGHTEVLELLDNGAGADSFKNDGVYSRYFTAYTENGRYSLKVRAHGGANTARLKLRPPLNRAAYIPGWVVNGEIE
ANPPRPEID.EDTQTTLEDFSRTASGGAFVVSQVPS.LPLPDQYPPSQITDLDATVHEDKII.LTWTAPGDNFDVGKVQR
YIIRISASILDLRDSFDDALQVNTTDLSPKEANSKESFAFKPENISEENATHIFIAIKSIDKSNLTSKVSNIAQ
>SP|P54281|ECLC_BOVIN/1-867
MVPRLTVILFLTLHLLPGMK.SSMVNLINNGYDGIVIAINPSVPEDEKLIQNIKEMVTEASTYLFHATKRRVYFRNVSIL
IPMTWKSKSEYLMPKQESYDQAEVIVANPYLKHGDDPYTLQYGRCGEKGQYIHFTPNFLLTNNLPIYGSRGRAFVHEWAH
LRWGIFDEYNGDQPFYISRRNTIEATRCSTHITGTNVIVKCQGGSCITRPCRRDSQTGLYEAKCTFIPEKSQTARESIMF
MQSLHSVTEFCTEKTHNVEAPNLQNKMCNGKSTWDVIMNSTDFQNTSPMTEMNPPTQPTFSLLKSKQRVVCLVLDKSGSM
SSEDRLFRMNQAAELFLIQIIEKGSLVGMVTFDSVAEIRNNLTKITDDNVYENITANLPQEANGGTSICRGLKAGFQAII
QSQQSTSGSEIILLTDGEDNEIHSCIEEVKQSGVIIHTIALGPSAAKELETLSDMTGGHRFYAN..KDINGLTNAFSRIS
SRSGSITQQTIQLESKALAITEKKWVNGTVPVDSTIGNDTFFVVTWT..IKKPEILLQDPKGKKYKTSDFKEDKLNIHSA
RLRIPGIAETGTWTYSLLNNHASPQILTVTVTTRARSPTTPPVTATAHMSQNTAHYPSPVIVYAQVSQGFLPVLGINVTA
IIETEDGHQVTLELWDNGAGADTVKNDGIYSRYFTDYRGNGRYSLKVHAEARNNTARLSLRQPQNKALYIPGYIENGKII
LNPPRPEVKDDLAKAEIEDFSRLTSGGSFTVSGAPP.GNHPSVLPPNKIIDLEAKFKEDHIQ.LSWTAPANVLDKGKANS
YIIRISKSFLDLQKDFDNATLVNTSSLKPKEAGSDENFEFKPEPFRIENGTNFYIAVQAINEANLTSEVSNIAQ
>GP|3560547|gb|AAC35003.1/1-865
MVPGLQVLLFLTLHLLQNTE.SSMVHLNSNGYEGVVIAINPSVPEDERLIPSIKEMVTQASTYLFEASQGRVYFRNISIL
VPMTWKSKPEYLMPKRESYDKADVIVADPHLQHGDDPYTLQYGQCGDRGQYIHFTPNFLLTDNLRIYGPRGRVFVHEWAH
LRWGVFDEYNVDQPFYMSRKNTIEATRCSTRITGTNVVHNCERGNCVTRACRRDSKTRLYEPKCTFIPDKIQTAGASIMF
MQNLNSVVEFCTEKNHNAEAPNLQNKMCNRRSTWDVIKTSADFQNAPPMRGTEAPPPPTFSLLKSRRRVVCLVLDKSGSM
DKEDRLIRMNQAAELYLTQIVEKESMVGLVTFDSAAHIQNYLIKITSSSDYQKITANLPQQASGGTSICHGLQAGFQAIT
SSDQSTSGSEIVLLTDGEDNGIRSCFEAVSRSGAIIHTIALGPSAARELETLSDMTGGLRFYAN..KDLNSLIDAFSRIS
STSGSVSQQALQLESKAFDVRAGAWINGTVPLDSTVGNDTFFVITWM..VKKPEIILQDPKGKKYTTSDFQDDKLNIRSA
RLQIPGTAETGTWTYSITG..TKSQLITMTVTTRARSPTMEPLLATAHMSQSTAQYPSRMIVYARVSQGFLPVLGANVTA
LIEAEHGHQVTLELWDNGAGADTVKNDGIYTRYFTDYHGNSRYSLKVRVQAQRNKTRLSLRQ.KNKSLYIPGYVENGKIV
LNPPRPDVQEEAIEATVEDFNRVTSGGSFTVSGAPPDGDHARVFPPSKVTDLEAEFIGDYIH.LTWTAPGKVLDNGRAHR
YIIRMSQHPLDLQEDFNNATLVNASSLIPKEAGSKETFKFKPETFKIANGIQLYIAIQADNEASLTSEVSNIAQ