HMM Seed Alignment: TIGR00883
Download Alignment>SP|P24115|CIT1_SALTY/23-413
GNFLEQFDFFLFGFYATYIARTFFP..AESEFASLMLTFAVFGSGFLMRPVGAIVLGAYIDRIGRRKGLMVTLAIMGCGT
LLIALVPGYQTIGLAAPALVLLGRLLQGFSAGVELGGVSVYLSEIATPGNKGFYTSWQSASQQVAIVVAALIGYSLNITL
GHDA..ISEWGWRIPFFIGCMIIPLIFVLRRSLQETEAFLQR..KHRPDTR.........EIFATIAKNWRIITAGTLLV
AMTTTTFYFITVYTPTYGRTVLN...........LSARDSLIVTMLVGVSNFIWLPIGGAISDRIGRRAVLMGITLLALI
TTWPVMQWLTAAP..DFTRMTLVLLWFSFFFGMYNGAMVAALTEVMPVYVRTVGFSLAFSLATAIFGGLTPAISTALVKL
TGD.KSSPGWWLMCAALCGL
>SP|P16482|CIT1_KLEPN/36-426
GNFLEQFDFFLFGFYATYIAHTFFP..ASSEFASLMMTFAVFGAGFLMRPIGAIVLGAYIDKVGRRKGLIVTLSIMATGT
FLIVLIPSYQTIGLWAPLLVLIGRLLQGFSAGAELGGVSVYLAEIATPGRKGFYTSWQSGSQQVAIMVAAAMGFALNAVL
EPSA..ISDWGWRIPFLFGVLIVPFIFILRRKLEETQEFTAR..RHHLAMR.........QVFATLLANWQVVIAGMMMV
AMTTTAFYLITVYAPTFGKKVLM...........LSASDSLLVTLLVAISNFFWLPVGGALSDRFGRRSVLIAMTLLALA
TAWPALTMLANAP..SFLMMLSVLLWLSFIYGMYNGAMIPALTEIMPAEVRVAGFSLAYSLATAVFGGFTPVISTALIEY
TGD.KASPGYWMSFAAICGL
>SP|P17448|KGTP_ECOLI/30-418
GNLVEWFDFYVYSFCSLYFAHIFFP..SGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLLSVCMMCFGS
LVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQHTM
EDAA..LREWGWRIPFALGAVLAVVALWLRRQLDETSQQET...RALKEAG.........SLKGLWRNRR.AFIMVLGFT
AAGSLCFYTFTTYMQKYLVNTAG...........MHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAAI
FTVPILSALQNVS..SPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANAIFGGSAEYVALSLKSI
GME.TAFFWYVTLMAVVAFL
>GP|1206033|gb|AAA90923.1/24-413
GNLVEWFDFYVYAFCAIYFAPAFFP..SDDPTVQLLNTAGVFAAGFLMRPIGGWIFGRLADRHGRKNSLMISVLMMCFGS
LMIACLPTYGSIGTWAPALLLLARLIQGLSVGGEYGTTATYMSEVALRGQRGFFASFQYVTLIGGQLLAVLVVVILQQLL
TEDE..LRAWGWRIPFVVGAIAALISLMLRRSLHETSSAET...RNDKDAG.........TIKGLFRNHAAAFITVLGYT
AGGSLIFYTFTTYMQKYLVNTAG...........MTAKNASYVMTGALFLFMVVQPFFGMLSDRIGRRNSMLLFGALGTL
CTVPLLMALKTVT..SPFMAFVLISLALCIVSFYTSISGLVKAEMFPPQVRALGVGLAYAVANAAFGGSAEYVALGLKTL
GME.NTFYWYVTAMMAIAFL
>GP|153176|gb|AAA79280.1/26-416
GHTVESHDWYVYTFLAVYFSDDIFPESSGDPLVPLLNTFAVFALAFAARPVGATVMGWYADRYGRRSALIVTILLMGLGS
LMIGLTPSYATAGPVAPVVLIAARLVQGFSLGGEYGAATTFLVESAAPGRRALFSSFQYVASSVGHILAGLSTLAASQ.I
SGDG..MDRWGWRLPFIWGAVICLAGLALRSTAEETLPTGTEGGRKKTRTG.........AFAALRSHPR.QTLLVVGLT
IGGNVAFYTWTTYLPTYATVSTG...........ADKDSAVLAGTVSLIFFGLIQPLGGLLCERIGGRAMMIGFGVAAAV
LTVPLLTAMT..G..WFWSVLAVQCAGMLVLTAYTSVSGAINAELFPQELRGRGIGLPYAASVALFGGTAPYVGTWLKSM
GLN.DFFPWYVAVLCLLTAL
>OMNI|NTL01RP0803/11-399
GNAAEWFDYALYAQFAYIIGQHFFP....NSSMRDTLTFAVFAAGFIVRPLGGIIFGNIGDRLGRRAALVIGIITMTVPT
AGIGLLPSYNTIGIAAPIILTIIRLIQGFSLGGEFSGCISYIVEHAAIEKRGLAGSASFVSMCGGMLLGLLTASGFSYFM
SDDI..LFEWGWRVPFIVGLFIGSIGLYIRKNLAESPIYKKAKERGRLARF.........PLRETLTQYPKELMIALGLY
ITVTAPFYTLTVFIGNFMQTLG............YSNQQSTIVNSIILIVMMIVFPISAYVSDKVGRRPVLICAIILLIL
LVYPIFVALG.SM..NITLAIISQVIFAGIIATYMGPIPTVLVEIFPTRVRFTGVALSYNLAAAIFGGTAPMVAMILTRI
TGD.NYAISYYLIALSLLSS
>SP|Q47421|OUSA_ERWCH/34-430
GNAMEWFDFGVYGFVAYALGQVFFP..G.DPGVQSIAALATFSVPFLM.PLGGVFFGALGDKYGRQKILAITIIIMSIST
FCIGLIPSYERIGIWAPILLLLAKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTLI
GEQA..FLAWGWRLPFFLALPLGLIGLYL.ATLEETPAFRQHVEKLEQNDRDGLKAGPGVSFREIATHHWKSLLVCIGLV
IATNVTYYMLLTYMPSYLSHSLH...........YSENHGVLIIIAIMIGMLFVQPVMGLLSDRFGRKPFVVIGSVAMFF
LAVPSFMLIN.SD..IIGLIFLGLLMLAVILNAFTGVMASTLPALFPTHIRYSALASAFNISVLIAG.LTPTVAAWLVES
SQN.LYMPAYYLMVIAVIGL
>SP|P44610|Y281_HAEIN/19-421
GTAIEFFDYYIYAAAAVLVFNTQFFH.SDDPLSNDLLSLSTLALAFFARPIGSALFGHFGDKIGRKKTLVASLVLMGGST
VVIGLLPNYAQIGIWAPILLCVCRVGQGIGLGGEWGGAALVATENAPEGKRAWYGTFPQLGAPIGLFVANGTFFLVSYLL
GHNA..LVEWAWRIPFVSSILLVAVGLYVRLTLHESHVFVEAEQKGK.........KLNAPVSVVFTKHLKPMVIGTFIM
VATYSLFYIMTAFAQAYSRTAPKLSEAGYALGLGIPANTFTGLLLISAIVFGIFISISGFYADKIGRRKWLIWVTIAIGV
LG.LAMPLFLENG.TPVSVFAFLVIGMAIMG.MTFGPMAALLPELFPTEVRYSGASLAYNLASIIGATIAAMISLKINAS
FG..VMGVGIYLAINALMTF
>SP|P44699|Y418_HAEIN/30-432
GTAIEYFDNYIYAMAAVLVFNHQFFH.AVDPLSGQIAALSTLALTFIARPLGAILFGHFGDRFGRKNTFVMSLLLMGIST
VVIGLLPTYDSIGIWATILLCLCRIGQGIGLGGEWGGAALVAVENAPEGKRGWYGTFPQLGAPLGLLLANGVFLGITAIF
GQEA..MTEWAWRIPFLSSVILVAIGLYVRLKLTEAPIFLAALNKPK.........PKRLPMLEVVTTHFKPFFLGMLVC
IAGYVLFYIMIAFSQIYAKSAPTVSEAGYAMGLGFSPQIFTALLMASAVSLAITIAASGKYIDKIGRRTWLIWTTVGVAI
FG.LSLPLFLENG.TTTSLFWFLFIGMGLIG.MGYGPLASFLPELFPTHARYSGASLTYNIAGLFGASVAAIIALPLNAH
YG..LKGVGIYLTLNAVLSL
>SP|P37643|YHJE_ECOLI/30-426
GTAIEFFDFYIYATAAVIVFPHIFFP.QGDPTAATLQSLATFAIAFVARPIGSAVFGHFGDRVGRKATLVASLLTMGIST
VVIGLLPGYATIGIFAPLLLALARFGQGLGLGGEWGGAALLATENAPPRKRALYGSFPQLGAPIGFFFANGTFLLLSWLL
TDEQ..FMSWGWRVPFIFSAVLVIIGLYVRVSLHESPVFEKVAKAKK.........QVKIPLGTLLTKHVRVTVLGTFIM
LATYTLFYIMTVYSMTFSTAAAPV.......GLGLPRNEVLWMLMMAVIGFGVMVPVAGLLADAFGRRKSMVIITTLIIL
FALFAFNPLLGSG.NPILVFAFLLLGLSLMG.LTFGPMGALLPELFPTEVRYTGASFSYNVASILGASVAPYIAAWLQTN
YG..LGAVGLYLAAMAGLTL
>OMNI|MT1238/11-408
GSAIEFYDFLIYGTAAALVFPTVFFP.HLDPTVAAVASMGTFAVAFLSRPFGAAVFGYFGDRLGRKKTLVATLLIMGLAT
VTVGLVPTTVAIGAAAPLILTTMRLLQGFAVGGEWAGSALLSAEYAPASKRGWYGMFTVVGGGIALVLTSLTFLGVNYTI
GESSPTFMQWGWRIPFLVSAALIAVALYVRFNIDETPVFARERADEKTRLG.....PAETPIAQVLRRQRREIVLAAGSA
VCCFGFVYLASTYLASYAQTR...........LGYSRGSILFDSVLGGLLCIVFTALSSALCDQLGRRR.VLLAGWAVAL
PWSLLVMPLIDSG.SP.SLFAVAVVGMYAIGGFGFGPTASFIPELFATSYRYTGSALAANLAGVAGGALPPVIAGALVAT
YG..SWAIGVMLAILALISL
>SP|P76350|SHIA_ECOLI/30-426
GAVVDWYDFLLYGITAALVFNREFFP.QVSPAMGTLAAFATFGVGFLFRPLGGVIFGHFGDRLGRKRMLMLTVWMMGIAT
ALIGILPSFSTIGWWAPILLVTLRAIQGFAVGGEWGGAALLSVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMT
TDEQ..FLSWGWRIPFLFSIVLVLGALWVRNGMEESAEFEQQQHYQAA..A.....KKRIPVIEALLRHPGAFLKIIALR
LCELLTMYIVTAFALNYSTQN...........MGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGTLIGTL
SAFPFFMALEAQS..IFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALITY
FAGNWHSVAIYLLAGCLISA
>GP|903977|gb|AAB41509.1/40-433
GTMVEWYDFFLYGFIAPLVFEELFFP.KLNALSGTIAVYATFAVGYASRPLGGLVFGHFGDKIGRKSMMLVTLLMMGIGT
AAIGLLPSVAQIGMSATCLLVALRFVQGFALGGESAAASLMVLESAQQRRRGLLGAALQAAGPLGVLLASLAVFVVSRLP
HDAL...LAWGWRVPFLVSAVLVVIGLYIRLRVEETVAFRKQQSKHE.........LTRIPAWETLRSYKWPVFVVLVVS
IMESTFYYLTGVYSISYVTKT...........LHMPGSVAIGAIACANAFALVSVPLYGALSDRLGRKG.VYLLGIVASA
IYLNFFFTMLDGR.SAMVVVLAVVAAVGVIHAPMYAMFGSFYGELFPTRVRFTGFSMGKAFGTVLGGGIAPMIAASLAAR
NHGDPSAIGLYYLCLAFVAL
>SP|P77228|YDFJ_ECOLI/1-390
......MDFQLYSLGAALVFHEIFFP.ESSTAMALILAMGTYGAGYVARIVGAFIFGKMGDRIGRKKVLFITITMMGICT
TLIGVLPTYAQIGVFAPILLVTLRIIQGLGAGAEISGAGTMLAEYAPKGKRGIISSFVAMGTNCGTLSATAIWAFMFFIL
SKEE..LLAWGWRIPFLASVVVMVFAIWLRMNLKESPVFEKVNDSNQP..T.....AKPAPAGSMFQSKS..FWLATGLR
FGQAGNSGLIQTFLAGYLVQT...........LLFNKAIPTDALMISSILGFMTIPFLGWLSDKIGRRIPYIIMNTSAIV
LAWPMLSIIVDKSYAPSTIMVALIVIHNCAVLGLFALENITMAEMFGCKNRFTRMAISKEIGGLIASGFGPILAGIFCTM
TES.WYPIAIMIMAYSVIGL