HMM Seed Alignment: TIGR00954
Download Alignment>GP|1302652|gb|AAC51741.1||U52111/1-681
MPVLSRPRPWRGNTLKRTAVLLALAAYGAHKVYPLVRQCLAPARGLQAPAGEPTQEAS............GVAAAKAGMN
RVFLQRLLWLLRLLFPRVLCRETGLLALHSAALVSRTFLSVYVARLDGRLARCIVRKDPRAFGWQLL.QWLLIALPATFV
NSAIRYLEGQLALSFRSRLVAHAYRLYFSQ.QTYYRVSN....MDGRLRNPDQSLTEDVVAFAASVAHLYSNLTKPLLDV
AVTSYTLLRAARSRGAGTAWPSAIAGLVVFLTANVLRAFSPKFGELVAEEARRKGELRYMHSRVVANSEEIAFYGGHEVE
LALLQRSYQDLASQINLILLERLWYVMLEQFLMKYVWSASGLLMVAVPIITATGYSESDAEAVKKAALEKKEEELVSERT
EAFTIARNLLTAAADAIERIMSSYKEVTELAGYTARVHEMFQVFEDVQRCHFKRPRELEDAQAGSGTIGRSGVRVEGPLK
....IRGQVVDVEQGIICENIPIVTP.....SGEVVVASLNIRVE.............................EGMHLL
ITGPNGCGKSSLFRILGGLWPTYG............GVLYKPPPQRMFYIPQRPYMSVG.SLRDQVIYPDSVEDMQRK..
...GYSEQDLEAILDVVHLHHILQREGG...............................WEAMCDWKDVLSGGEKQRIGM
ARMFYHRPKYALLDECTSAVSIDVEGKIFQAAKDAGIALLSITHRPSLWKYHTHLLQFD..GEGGWKF
>SP|P55096|ABD3_MOUSE/1-647
MAAFSKYLTARNTS........LAGAAFLLLCLLHKRRRALGLHGKKSGKPPLQNNEK............EGKKERAVVD
KVFLSRLSQILKIMVPRTFCKETGYLLLIAVMLVSRTYCDVWMIQNGTLIESGIIGRSSKDFKRYLF.NFIAAMPLISLV
NNFLKYGLNELKLCFRVRLTRYLYEEYLQA.FTYYKMGN....LDNRIANPDQLLTQDVEKFCNSVVDLYSNLSKPFLDI
VLYIFKLTSAIGAQGPASMMA......YLLVSGLFLTRLRRPIGKMTIMEQKYEGEYRYVNSRLITNSEEIAFYNGNKRE
KQTIHSVFRKLVEHLHNFIFFRFSMGFIDSIIAKYVATVVGYLVVSRPFLDLA..........HPRHLHSTHSELLED..
..YYQSGRMLLRMSQALGRIVLAGREMTRLAGFTARITELMQVLKDLNHGRYERTMVSQQGKGIEG..AQASPLVPG...
.....AGEIINTDNIIKFDHVPLATP.....NGDILIQDLSFEVR.............................SGNHVL
ICGPNGRGKSSLFRVLGELWPLFG............GRLTKPERGKLFYVPQRPYMTLG.TLRDQVIYPDGKEDQKKR..
...GISDQVLKEYLDNVQLGHILEREGG...............................WDSVQDWMDVLSGGEKQRMAM
ARLFYHKPQFAILDECTSAVSVDVEDYIYSHCRKVGITLFTVSHTKCLWKHHEYYLHMD..GRGNYEF
>GP|861308|gb|AAA68340.1/1-649
MAVFSKLQLLGQAIPP...KQYAPGVVGMLAVFALIKLYKQDIRGTKHLVAKTKKDGS............KGQ..KAHVD
GVFLGKLARILKILIPGFFSKESFYLILIAVSLLCRTYADVYMIITSTKIEASIIDRNPLLFALEAF.KYVLNLPAISVT
NAILKFGIAELKLRFRERLSTHLYSQYLKG.FTFYKMSN....LDTRIQNADQLLTQDVDRFCDGIVELYSNLSKPILDV
FLYLFRLGTSLGFSSPSILFS......YLLFTGVGLTYLRRPIGRLTVEEQALEGEYRYVNSRLIMNSEEIAFYQGNQSE
KETIMSTFASLVQHLRKIILFRFSIGFVDNIVAKYLATVVGWYAVGSSFFDKQ..........HKPFIGMSRNQLMQE..
..YYNSGRMMYKMAEALGRLALAGRDMTRLSGFTSRVDTLLNVLDDVNSGNYKRTMVGEKEESSA...LIKSELVAG...
.....SGNLRVQDNVIRFDNVPLVTP.....NGDVLIERLNFEVP.............................SGTNVL
VCGPNGCGKSSLFRVLGELWPLFG............GTLTKPAKGKLFYVPQRPYMTLG.TLRDQIIYPDRPLDMIRK..
...GVSDSDLEQMLENVQLTHILEREGG...............................WSAVQDWMDVLSGGEKQRIAM
ARLFYHKPQFAILDECTSAVSVDVEGAMYRLCREKNITLFTVSHRKSLWKYHEYSLYMD..GRGSYRF
>GP|861307|gb|AAA68339.1/1-653
MAVLSKLQLLNSTLTY...KNWSPAFVGIFGCITIAKIYSASFRNEGKGLSLSETVGSGDV........KKGKT.KASLN
AEFFAKLKKLLKILIPGPFSSEVFYMIVIGFVLLARTIADVYMITNATSVEASIVDRSPIMFAMSVF.KYFLNLPAISLI
NALLKFSLSELKLRFRENLTKYLYGKYLGG.FTYYQISN....LDSRIQNPDQLLTQDVEKFCDGIVELYSNMTKPILDV
FLYVFKLGRALGWEGPGLLFG......YLMASMVVLTKLRRPIAKLTVEEQVLEGEYRYVNSRLIMNSEEIAFYQGNKPE
KQALMGSFNNLVYHLRKTIMFRFTLGFVDNIVGKYITNIVGWVACAKTFFDVN..........NEKFNEMDRNELMQE..
..LYNNGRMMLKLSEALGRLALAGRDMTRLSGFTTRVDTLMKVLDDMKAGRFEKAQVAD.ESGEE...GQRLMLKAG...
.....SGKLLAQDNMIKFDEVPLVTP.....NGDILIESLSFEVP.............................SGRNVL
VCGPNGCGKSSLFRTLGELWPVMG............GTLTKPAKGKLFYVPQRPYMTLG.TLRDQVIYPDTSFDMKMK..
...GMSDKDLEQMLENVQLTNILEREGG...............................WSAVQDWMDVLSGGEKQRIAM
ARLFYHKPQFAILDECTSAVSVDVEGAMYRLCREMNITLFTVSHRKSLWKYHEYSLYMD..GRGSYRF
>GP|1370314|emb|CAA97852.1/113-827
MQLDSGARIMYIPEVELVDRQSPDDNKFMNATDKKKRKRIFIPPKDNDVYEHDKFLFKNVE........LERAKNSQLFY
SKFLNQMNVLSKILIPTVFDKNFLLLTAQIFFLVMRTWLSLFVAKLDGQIVKNIIAGRGRSFLWDLG.CWFLIAVPASYT
NSAIKLLQRKLSLNFRVNLTRYIHDMYLDKRLTFYKLIFDAKASNSVIKNIDNSITNDVAKFCDATCSVFANIAKPVIDL
IFFSVYLRDNLGTVGVAGIFVN......YFITGFILRKYTPPLGKLAGERSASDGDYYNYHLNMINNSEEIAFYQGTAVE
RTKVKELYDVLMEKMLLVDKVKFGYNMLEDYVLKYTWSGLGYVFASIPIVMST...........LATGINSEEKNMKE..
..FIVNKRLMLSLADAGSRLMHSIKDISQLTGYTNRIFTLLSVLHRVHSLNFNYGAVPSILSIRTEDASRNSNLLPTTDN
SQDAIRGTIQRNFNGIRLENIDVIIPSVRASEGIKLINKLTFQIPLHIDPITSKSNSIQDLSKANDIKLPFLQGSGSSLL
ILGPNGCGKSSIQRIIAEIWPVYNKN..........GLLSIPSENNIFFIPQKPYFSRGGTLRDQIIYPMSSDEFFDR..
...GFRDKELVQILVEVKLDYLLKRGVGLTY............................LDAIADWKDLLSGGEKQRVNF
ARIMFHKPLYVVLDEATNAISVDMEDYLFNLLKRYRFNFISISQRPTLIKYHEMLLEIGENRDGKWQL
>SP|P34230|PXA2_YEAST/24-728
LLLATLYNSNSSSSNNKTDKKDSESTVLENKKIEEGKETAVDREEDESSKEELTIVSKHSTDSEDGAIIIDKESKTNHKG
GERKGKVDFLFKLLLHDKKC..LILFITQAILLNIRTLLSLRVATLDGQLVSTLVRAQYANFTKILLGKWMILGIPASFI
NSLISYTTKLCAVTINRKVSDFLLSKYLSNHHTFYSVAS....AE.SVSEIQDNLTKDIYTFSMNSSLLLNQLLKPMLDL
ILCSFKLLTSNTSVMGEGTLALG...LIVYASNSLLKLIQPNFTRLTMASASLESWFRSLHSNLHSSNEEIALLRGQKRE
LENVDYSFYRLVLFLNREIKARAIYDVATAFVIKYTWGAAGLVLCSIPIFFKN..........KPSEDTLQLKEPGNDMT
ADFITNRRLLVTASSSIGRFVELKRNIQQLRGIRLRLNKFNDLLDANKGDDEKEPRDER.....................
......CIVEYDDSRIKFENIPLITP.....ANQVLVPELSFDLK.............................HGNHLL
IIGPNGCGKSSLFRILGGLWPIRATPNKNHQSKLIMPRRTVDRDCAIFYLPQRPYMGNRSTFREQIIYPDSIEQFKERYH
NDYDLGDADLIKILQLLDLEDLVTENMSLLLAQRTSKNDSQQLSTEDNQSPCAIKVRDAFSIVRNWSEELTIGVQQRLAM
ARMYYHKPKFAVLDECTSAVAPEMEQRMYENAQNFGISLISVCHRTSLWHFHNYLLKFD..GKGGYQF