HMM Seed Alignment: TIGR01026
Download Alignment>OMNI|NTL01CT00685/1-442
MEEITTEFNTLMTELPDVQLTAVVGRIIEVVGMLIKAVVPDVRVGEVCLVKRH.GMEP..LVTEVVGFTQNFVFLSPLGE
LTGVSPSSEVMATG....LPLHIR...AGEGLLGRVLNGLGNPIDTETKGPLENVDAIYPIFKAPPDPLHRAKLRTILST
GVRCIDGMLTVAKGQRIGIFAGAGVGKSSLLGMIARNAEEADINVIALIGERGREVREFIENDLGEEGMKRSVIVVSTSD
QSSQLRLNAAYVGTAIAEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARAGYTPSVFSTLPKLLERAG..ASDKG
.TITAFYTVLVAGDDM.NEPVADEVKSILDGHIVLSNALAQAYHYPAIDVLASISRLLTAIVPEEQRRIIGRAREVLAKY
KANEMLIRIGEYRRGSDREVDFAIDHIDKLNRFLKQDIHEKTNYEEAAQQLRAIFR
>OMNI|CP0039/1-442
MDQLTTDFDTLMSQLGDVNLTTVVGRITEVVGMLIKAVVPNVRVGEVCLVKRN.GMEP..LVTEVVGFTQSFAFLSPLGE
LSGVSPSSEVIPTG....LPLHIR...AGNGLLGRVLNGLGEPIDVETKGPLQNVDQTFPIFRAPPDPLHRAKLRQILST
GVRCIDGMLTVARGQRIGIFAGAGVGKSSLLGMIARNAEEADVNVIALIGERGREVREFIEGDLGEEGMKRSVIVVSTSD
QSSQLRLNAAYVGTAIAEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARAGYTPSVFSTLPRLLERSG..ASDKG
.TITAFYTVLVAGDDM.NEPVADEVKSILDGHIVLSNALAQAYHYPAIDVLASISRLLTAIVPEEQRRIIGKAREVLAKY
KANEMLIRIGEYRRGSDREIDFAIDHIDKLNRFLKQDIHEKTNYEEAAQQLRAIFR
>SP|P23445|FLII_BACSU/1-437
MQLNEDTESDRLYRMTDS..YKRYGKVKRVIGLMIESKGPASSIGDLCLIYAK.GQSGKVIKAEVVGFQEENILLMPYLE
AASIAPGSIVEATG....ESLRVK...VGTGLIGQVIDAFGEPLDESFCRKVSPVSTE....QSPPNPMKRPPIREKMGV
GVRSIDSLLTVGKGQRIGIFAGSGVGKSTLMGMIAK.QTEADLNVIALVGERGREVREFIEKDLGKEGLKRSIVVVATSD
QPALMRLKAAYTATAIAEYFRDKGQNVMFMMDSVTRVAMAQREIGLAAGEPPTTKGYTPSVFAILPRLLERTG..ANEHG
.TITAFYTVLVDGDDM.NEPIADTVRGILDGHIVLDRALANKGQFPAVNVLKSISRVMSNISTKQHLDAANKFRELLSTY
QNSEDLINIGAYKRGSSREIDEAIQFYPQLIQFLKQGTDEPALLEESIAALTSLTG
>SP|O83417|FLII_TREPA/1-437
MEADLLCKYEVALRESEP..VKYVGHVTAVRGLLIESRGPHAVVGELCRIVLR.RQGRP.LIAEVVGLAGSTVKLMSYTD
THGVEVGCAVVAEG....AALSVP...VGDALLGRVLNAFGKAIDGKGE.IYAPLRSE..VLRASSNPMERLPITRQMVT
GVRVLDSLLAVGCGQRLGIFSGSGVGKSTLMGMIAR.NTDADVSVIALIGERGREVMDFVAHDLGPEGLKRSVIVSATSD
ESPLARVRGAYTATAIAEYFRDQGKQVLLLFDSLTRFAKAQREIGLASGELPATRGYTPGVFETLPKLLERAG..SFSMG
.SVTAFYTVLVDGDDL.DEPISDAVRGIVDGHIVLSRALAQRNHYPAIDVLQSVSRLAHRVLGADMKEAVRIVRRALAVY
AEVEDLVRVGAYQQGSDAELDRAIAMRAELERFLTQGAQERVRFQDTVTSLSMLTG
>SP|P52612|FLII_ECOLI/5-454
LTRWLTTLDNFEAKMAQLPAVRRYGRLTRATGLVLEATGLQLPLGATCVIERQNGSETHEVESEVVGFNGQRLFLMPLEE
VEGVLPGARVYAKNISAEGLQSGKQLPLGPALLGRVLDGSGKPLDGLP..SPDTTETG.ALITPPFNPLQRTPIEHVLDT
GVRPINALLTVGRGQRMGLFAGSGVGKSVLLGMMAR.YTRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPAD
VSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGISGGG
.SITAFYTVLTEGDDQ.QDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSF
QRNRDLVSVGAYAKGSDPMLDKAIALWPQLEGYLQQGIFERADWEASLQGLERIFP
>SP|P52607|FLII_BORBU/1-436
...MSNFFENYLRQVDDIETVSFVGRVQKIKGLLVESLGPQCAIGDLCLIDQR.NGKK..VCAEVLGFNGPYVSLMAYEG
FSGIEVGNKVYSLN....KGLEIN...LSDELLGRVIDSLGRPIDNKGS.FLNNSYKE..LIFEKINPINRSIFEDQILT
GVKVLDGFLPVAKGQRVGIFSGSGVGKSTLLGMIAK.NSNADVNVIAFIGERGRELNEFIEHELGEERLKKSVLVVSTSD
ESPISRYKGAYVATMIAEYFREQGKDVALLFDSITRFANAKREMSLSLGEPPVAKGYPPSVFVEIPILLERSG..FNGNG
GSVTGFYTVLVEGDDF.TEPVADNIKAVLDGHIILDRDLFDRGIYPSINVLSSTSRSIHRIMSLEKQKLIMKARNLLSIY
KDYEDLIRTGIYLKGSNKDVDFAISKYPKIINFISQGINETFDFENLEDEIKEILS
>SP|O07025|FLII_HELPY/1-434
..MPLKSLKNRLNQHFDLS..PRYGSVKKIMPNIVYADGFNPSVGDVVKIE.K..SDGSECVGMVVVAEKEQFGFTPFNF
IEGARAGDKVLFLK....EGLNFP...VGRNLLGRVLNPLGQVIDNKG..ALDYERLAP.VITTPIAPLKRGLIDEIFSV
GVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMITR.GCLAPIKVIALIGERGREIPEFIEKNLKGD.LSSCVLVVATSD
DSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGYPPSALSLLPQLMERAGK.EENKG
.SITAFFSVLVEGDDL.SDPIADQTRSILDGHIVLSRELTDYGIYPPINILNSASRVAKDIISESQNLCARKFRRLYALL
KENEMLIRIGSYQMGNDKELDEAIKKKALMEQFLAQDENALQPFETSFQQLEEILR
>SP|O67531|FLII_AQUAE/4-440
IRRNLQKSYLKRCSEMYLRGLKVSGEIVSAKGIYLEAILPFANIGNEVEIQ....SNSRRIRGEVIGFSGDKVLVMPYEP
VFGLRKGDKVLLKN....ELVSTK...TGNGVVGKVVDPFGNPLDGG...FIGFVEEK.GLELPQINPLYRERIREVFDT
GVRSVNALFTLGKGQKIGIFAGAGVGKSTLLGMITR.HSKADVVVLALIGERGREVKEFLEEVLGEEGLKKSVVVVSTAD
QSPILKVKGAISAVVHAHHFASQGKDVLLLMDSITRLALAQREIGLAAGEPPTLKGFTPSVFQLLTRIAESCG..AFKKG
.SITGIFTVLVEGDDISLDPIADSLMGVLDGHIILSRKRAVRGLFPAVDPVRSLSRLMPKLVSEEHFMKANFFKEVLSKF
EDVEELVRIGLYKGGSNPLVDKVINNLEKVESFFKQKPEEKVNFEESLKALDEIYS