HMM Seed Alignment: TIGR01129
Download Alignment>SP|P44591|SECD_HAEIN/123-602
WGLDLRGGVRFLMEVDMNATLVKRQEQLQDSLRGELRKEKIQYTAIKNTEHFG--TLITLANVSQRAKAERIIR------
-----QLHPTLDITEPDADSINLGLSTAALNEARDLAIEQNLTILRKRVAELGVAEA-VIQRQG---AERIVIELPGV--
-QDTARAKEILGATATLEFRIVNQN-VT----------------------------------------------------
--------------------------------------------------------ADAISRNMLPA--DSEVKYDRQGH
P------VALFKRA-------------VLGGEHIINSSSGLDQHSSTP--QVSVTLDSEGGEIMSQTTKKYYK-------
-KPMATLYVEYKDNGKKDENGKTILEKHEEVINVATIQGRFG-SNF-----QITG---VDSIAEAHNLSTLLKSGALIAP
IQIVEERTIGPSLGAQNVEQGINASLWGLVAVIAFMLFYY-KMFGVIASFALVIN---IVLLVGLMSILPGATLSMPGIA
GIVLTLGMSVDANVLIFERIKEEIRNGRSIQQAINEGYNGAFTSIFDANLTTILTAIILYAVGTGPIQGFAITLSLGVAI
SMFTAITGTRALV
>SP|P19673|SECD_ECOLI/123-601
LGLDLRGGVHFLMEVDMDTALGKLQEQNIDSLRSDLREKGIPYTTVRKENNYG--LSITFRDAKARDEAIAYLS------
-----KRHPDLVISSQGSNQLRAVMSDARLSEAREYAVQQNINILRNRVNQLGVAEP-VVQRQG---ADRIVVELPGI--
-QDTARAKEILGATATLEFRLVNTN-VD----------------------------------------------------
--------------------------------------------------------QAAAASGRVPG--DSEVKQTREGQ
P------VVLYKRV-------------ILTGDHITDSTSSQDEYN-QP--QVNISLDSAGGNIMSNFTKDNIG-------
-KPMATLFVEYKDSGKKDANGRAVLVKQEEVINIANIQSRLG-NSF-----RITG---INNPNEARQLSLLLRAGALIAP
IQIVEERTIGPTLGMQNIEQGLEACLAGLLVSILFMIIFY-KKFGLIATSALIAN---LILIVGIMSLLPGATLSMPGIA
GIVLTLAVAVDANVLINERIKEELSNGRTVQQAIDEGYRGAFSSIFDANITTLIKVIILYAVGTGAIKGFAITTGIGVAT
SMFTAIVGTRAIV
>OMNI|NMB0607/124-588
LGLDLRGGVHFTMQVDMKAAMQKTFERYSGDIRRELRREKIRSGTVRQAGNS---LTVPLQDAGDVQKALPQLR------
-----KLFPEATLNSDGSN-IVLTLSEEAVNKVCSDAVKQNITTLHNRVNELGVAEP-VIQQSG---ADRIVVQLPGV--
-QDTAKAKDIIGRTATLELRMVEDDPAK----------------------------------------------------
--------------------------------------------------------LREALEGNVPS--GYELLSSGGDR
PEI----LLISKQV-------------ELTGDNINDAQPSFDQMG-AP--AVSLSLDSAGGSIFGELTAANVG-------
-KRMAMVLIDQ---GKSE------------VVTAPVIRTAITGGRV-----EISG---SMTTAEANDTSLLLRAGSLAAP
MQIVEERTIGPSLGKENIEKGFHSTLWGFAIVAAFMVVYY-RLMGFFSTIALSAN---ILFLIGILSAMQ-ATLTLPGMA
ALALTLGMAIDSNVLINERIREELRAGVPPQQAINLGFQHAWATIVDSNLTSLIAGIALLVFGSGPVRGFAVVHCLGILT
SMYSSVVVFRALV
>EGAD|162820|RP586/42-503
LGLDLRGGANLLLDVDFDTYLNDSMENLADTLRKNLRKHKIGYKNLLVRHNN---IQLEVRSPEVLKSLKKIIN------
-----KIDPEIIIGVNKNK-IKLRYSESRFNDLLNKVVEQSIEIVRMRVDSTGTKEP-TLQRQG---NKHILLQVPGS--
-ENPSYLKNILGKTAKLTFHLVDEN-AN----------------------------------------------------
--------------------------------------------------------IEDAIKGHVPL--GSMLIKGDSKH
HGEY--YIVIKKKV-------------LLSGAHLTKASASFDQNS-QP--IVAFSFNNLGSKIFGEITKNNTG-------
-KRLAIVLDNK-------------------LLSAPIINGAIIGGNG-----IITG---NFTIESANELALLLRVGSLPTP
LKIIEERSIGPNLGADSIESGKKAGLIGFVAVCIFMILSY-GVIGLFANIALILA---LLYILALLSLFQ-ATLTLPGIA
GIILTIGMAVDANVLIYERIKEELHKGVSNLYAIRTGFESAFATIIDSNITTLIVAFALYIFGVGAIKGFAVALTIGIIS
SMFSAIIITKLLI
>SP|O67102|SECD_AQUAE/35-490
LGLDLKGGVEFLLEPDFSVAIEREYEDLARNLREKLSK--FNVLEVYATKEG---VIIELLDKKEVENIKKVIQ------
-----DINPNVIFEEEGDK-LVVKFTQKYVEQLKEDIVRQSIEIIRDRIDKLGVTQP-VVTRVG---KYRILVDLPGF--
-LDVERAKKIIGSTASLELKLVIDVSTDR---------------------------------------------------
------------------------------------------------------KELEKKLTPDRE------ILPSRDGR
E-----WFLVEKAP-------------VITGQDLKTAYVGVDN-LGQP--AVNFELKGEAAEKFGKFTEQNIG-------
-KRLAIVLDRK-------------------VVSAPVIRSKISD-RG-----QITG---NFTAQEARDLALILRTGSLPSP
LKFLQEKIVGPSLGKDAIEQGIKAGILAIILLAVVLIARY-KTAGITANISIFLN---VLFLLASMAFLG-ATLTLPGIA
GIILNMGIAVDSNVLIFERVKEELRLGNTVSKAIELGFKRTLSAVWDTHVTLLVASVILFQFGSGPVKGFATTLALGTIA
SFISNVYYAKVFL
>SP|O33517|SECD_RHOCA/70-540
LGLDLRGGAHLLAEVHLGEVYKARMDALWPEVRKVLAAERATIGAIRRVPSPEGELRIQIGERAQIARAVEVARTLASPV
VSLTGVGQTDYEVTGEGDT-VVFRLSEAEKKATDDRTMQQSLEIVRRRVDAAGTREP-TIMREG---TDRILIEVPGI--
-GSAQELKDLIGTTAKLTFHPVLST-TS----------------------------------------------------
--------------------------------------------------------NPNAPVAS-----GNELLPDAERQ
GL----YHLLDEVP-------------VVTGDDLTDARP-TTDDNGAP--AVSFRFNVSGARAFGDYTAGHIG-------
-EPFAIVLDGK-------------------VISAPTIQAHIAGGSG-----IITG---RFSIEEATDLALLLRAGALPAG
MTFLEERTIGPELGADSVKAGMVASVIGFVAVVAYMIASY-GLFGFFSSVALFIN---IAFIFAVMGAIG-GTMTLPGIA
GIVLTIGTSVDANVLIYERMREEIRSGKSPVRAIELGFDKAMSAIIDANVTSFLSSAILFVLGAGPVRGFAVTTMIGIAA
SIFTAIWVVRLMI
>SP|O26074|SECD_HELPY/14-480
LGLDLRGGLNMLLGVQTDEALKNKYLSLASALEYNAKKQNILLKDIKSNLEG---ISFELLDEDEAKKLDALLLEL----
-----QGHSQFEIKKEAG-FYSVNLTPLEQEELRKNTILQVIGIIRNRLDQFGLAEP-VVIQQG---KEEISVQLPGIKT
LEEERRAKDLISRSAHLQMMAVDEEHNK----------------------------------------------------
--------------------------------------------------------DAMKMTDLEAQKLGSVLLSDVEMG
G-----KILLKAIP-------------ILDGEMLTDAKVVYDQNN-QP--VVSFTLDAQGAKIFGDFSGANVG-------
-KRMAIVLDNK-------------------VYSAPVIRERIGGGSG-----QISG---NFSVAQASDLAIALRSGAMSAP
IQVLEKRIIGPSLGKDSVKTSIIALVGGFILVMGFMVLYY-SMAGVIACLALVVN---LFLIVAVMAIFG-ATLTLPGMA
GIVLTVGIAVDANIIINERIREVLRENEGIAKAIHLGYINASRAIFDSNITSLIASVLLYAYGTGAIKGFALTTGIGILA
SIITAIVGTQGIY
>SP|Q55610|SECD_SYNY3/29-444
LGLDLRGGAQLTIEVQPT--------------------------------------------------------------
---------------------------KEIPQIDNDSLVAVKTVIENRVNALGVSEP-LVQTAG---EDKIVVQLPGV--
-TDPGQAERILGGTAQLEFQQQRPGTEG----------------------------------------------------
-----------------------------------------------------EFQAEYSIKRQLDAELENLRRSGASPE
NSDRL-EELIKAKEESNKALLALFEPMGLTGKNLTDARPSPNQSG-TA-WEVALRFDEEGGQKFAELTQAVAGTG-----
-RSLGVFLDND-------------------LISAPVVGVEFANTGITGGAAVITG---NFTIDTANDLAVQLRGGSLPFP
VEVVENRTVGATLGQESIRRSLVAGFVGLVLVLVFMAVYY-RLPGIVADISLMIY---AVLTLAAFALVG-VTLTLPGIA
GFILSIGMAVDANVLIFERTREELRAGNTLYRSVEAGFFRAFSSILDSNVTTLIACAALFWFGSGLVKGFALTLAIGVMV
SLFTALTCSRTLL
>SP|Q9ZG86|SECD_BRUAB/47-427
LGLDLSGGSRLILQVQN---------------------------------------------------------------
--------------------------------AGKTDLETTANIMRQRLEELGYGNP-VVEGEG---RNQIRVEVPGL--
-YDAQLLKDILTIRGNLSFRAMDDT-MS----------------------------------------------------
--------------------------------------------------------PDDAIRGTPPA--DSEIVYSFDDP
PVG----YLLKKTP-------------ILTGHDITDAKASISADDGQP--VITLTLDDNGRRRLADLTAQGNE-------
-NSFAIVVDNQ-------------------VVSAPTVSGPLDTSEL-----QIEG---AFDLQAANNMAVVLRSGALPQA
VTVLEERTIASALGEDYASAAVLAALLAALVVGLFMVLSY-GILGVIALVALVVN---IVILTAVLSLIG-ASISLASIA
GLVLTIGLAVDAHILIYERVREDRRKGYSVVQAMESGFYRALSTIVDANLTTLIAALVLFLLGSGTVHGFALTVAIGIGT
TLFTTLTFTRLLI
>OMNI|BB0652/138-562
LGLDLSGGMSVTISLDYS--------------------------------------------------------------
-------------------SVEKKLGRSLTFAEREDAIYRIMQILKDRVBRFGLTEPKIVREAG---GNKIFLDIPGE--
-KDESRVSTLLSGKGNLTFYVVDDESTS----------------------------------------------------
--------------------------------------LLHRKILEAGSLFSIPEIQASMNLPDSKQIFPWYVKDSYGVD
DESSVRYYVVDASPEN-----------SFDGAHIKDAGVSNDPRTGRD--TVAFSLDVDGSEKFFKFTQKNVG-------
-KSLAVVMEGK-------------------IKSVAGIGYAITGGNV-----SIQGD--SFDKKEAQDLALVFKTAAFPVD
IKIDDLRIIGPTLGARTIDLGIKASALALCLVFLFICVYY-GLSGVVAGFSLVIYN--VFLILAILSAFN-FTLTLTSIA
GLILTMGMAVDINIVIYERIKEEIREGRRFENAFEAGFKKAFLSIMDANITTFIAVLFLTLLGTGVIQGFAWSLSVGIVA
SLFSSLIFSRFIL
>SP|O83425|SECD_TREPA/145-562
LGLDLSGGTSVVIKADLS--------------------------------------------------------------
-------------------EVTKGVPDAERAAIRSEAMALVLSTLENRINRFGLSEP-VIRRQG---EDRVYVEIPGL--
-TDRDRVHSIVMGRGVLAFHLVDDDATQKL--------------------------------------------------
--------------------------------------LDHYRNNPQGTFDAAHQLHDLSLVPEHTSVLGVYRKDSYGLD
VRD--GFLVVKKEP-------------ALEGRHIRDATVSSG-RANEP--LVLFDLDHEGARIFSELTTKEIG-------
-RRLAIVSDGK-------------------IRSAPAIREPITAGSG-----SISG----FSAEEAQNLKTALRSAWLNVA
LEIENQQVVGASMGEESIRQGTRALVWGLCAVLLFMLVWY-QEAGVNACVAQLLN---LYIMFGVLSAFN-LTLTLSSIA
GMILTIGMAVDANVVVFERIREELALGKSRGAAVCSGFERAFWAIMDSNVTTFIAALFLSVLGTGPIKGFAYSLAIGVVS
SVFTALFVSRLMF
>OMNI|TM0860/36-444
LGLDIKGGARIEYMVEVQQGTENP--------------------------------------------------------
----------------------------------SDVVDDVWTVLRNRLDAAGYTEA-AVKKVLRDNKYYIVVEIPGA--
-TDTVQAEKLIGSTGVLYFAQVLDEYLGED--------------------------------------------------
--------------------------------------------------PS--KVPELSLEARREN---AVWLKGRDGK
------WYLVKKEIMG-------RKDLVLEAPRIVYARPEVETRTGRYGYKVSFELAKEYVDIFKKITQALYVPEGTYDP
KKRLAIVLDDV-------------------VQFVGQVVAIITDGKA-----EITG---NFSLEEAKQLAAILRSGALPAR
LVKTSSGWVAPLLGRDVIDASLKAGIIGLILVLVYMIIYY-RTMGIVADLALIYN---TVLLLGVMAAGK-FILTLPGIA
GIILTIGTTVDGNVIIYERIKEEMRLGKPVKTSIAAGFDRSLSTILDANITTILTGLILYYFGTGTIKGFAITLIIGVLG
SIFVNLVFSRLLL
>OMNI|DR1822/72-447
LGLDLKGGLRIELAPES---------------------------------------------------------------
------------------------------GTATRDELDRVKTVIENRINALGVAEP-TVTVSG---GKRVVVEIPGA-T
PAVQDRARSIIQQTARLEFRIVNSDAKPD---------------------------------------------------
-------------------------------------------------------------PAVRE--------KNPRSS
G-----YTLAQLGP------------VVATGETIADATSGTDQRSGQW--VVNFKTTDAGAKTFGDFTGKNVN-------
-RLMAVVLDDQ-------------------IQSVATINQRLFR-DI-----QISG---NFTPEEASQLALVLKSGALPIK
IVTAAERSIGPSLGADAIRSGAIAALVGIGLVFVMLFAYYGLWFGLVGALGLLFS---SIIILGILGGFG-ATLTLPGIA
GLVLTIGAAVDGNVISFERIKEELARGKGIKNAIGAGYEHSTAAILDVNASHLLSALALYNYSTGAVKGFAVTLIIGVIA
STFSNLVFAKWFM
>GP|3220156|gb|AAC31122.1/33-405
LGLDLQGGFEVLYDVQP---------------------------------------------------------------
--------------------------VKKGDKITKDVLVSTVEALNRRANVLGVSEP-NIQIEG---NNRIRVQLAGV--
-TNQNRAREILATEAQLSFRDANDK-------------------------------------------------------
--------------------------------------------------------ELLNGADLVENG-AKQTYDSTTNE
P------IVTIKLK---------------DADKFGEVTKKVMKMAPNN--QLVIWLDYDKGDSFKKEVQKEHP-------
-----------------------------KFVSAPNVSQELNTTDV-----KIEG---HFTAQEAKDLASILNAGALPVK
LTEKYSTSVGAQFGQQALHDTVFAGIVGIAIIFLFMLFYY-RLPGLIAVITLSVY---IYITLQIFDWMN-AVLTLPGIA
ALILGVGMAVDANIITYERIKEELKLGKSVRSAFRSGNRRSFATIFDANITTIIAAVVLFIFGTSSVKGFATMLILSILT
SFITAVFLSRFLL
>SP|Q50634|SECD_MYCTU/40-537
LGIDLQGGTRVTLTARTPDG------------------------------------------------------------
------------------------------SAPSREALAQAQQIISARVNGLGVSGS-EVVVDG----DNLVITVPG---
-NDGSEARN-LGQTARLYIRPVLNSMPAQPAAEEPQPAPSAEPQPPGQPAAPPPAQSGAPASPQPGAQPRPYPQDPAPSP
NPTSPASPPPAPPAEAPATDPRKDLAERIAQEKKLRQSTNQYMQMVALQFQATRCESDDILAGNDD---PKLPLVTCSTD
HK---TAYLLAPSI--------------ISGDQIQNATSGMD-QRGIG-YVVDLQFKGPAANIWADYTAAHIGTQT----
----AFTLDSQ-------------------VVSAPQIQEAIPGGRT-----QISGGDPPFTAATARQLANVLKYGSLPLS
FEPSEAQTVSATLGLSSLRAGMIAGAIGLLLVLVYSLLYY-RVLGLLTALSLVASGSMVFAILVLLGRYINYTLDLAGIA
GLIIGIGTTADSFVVFFERIKDEIREGRSFRSAVPRGWARARKTIVSGNAVTFLAAAVLYFLAIGQVKGFAFTLGLTTIL
DLVVVFLVTWPLV