HMM Seed Alignment: TIGR01180
Download Alignment>ORF01441/11-754
PDPTMRFLPYPIAFLSIILLLSCAGRKRGKD..IDFTKYVNPLIGTD.....WVGNTYPGATVPFGMVQLSPDNGKSGWD
Y.........IAGYYYPDTMIAGFSHTHLSGTGAGDLYDIRFMPIGK....SSPDEVVP........KDHIRTSFSHKNE
KAESGYYAVRLDN.GIKVELTATEHCGIQRYTIQDSVLEVRLDLNSTMNWDRTTDSRLQLIDSHTISGYR....FSDGWA
RDQRIFFRSRFSLP.........IEQFTIDSVPQYANNDTTQFIGYGLVAHLSFL......IAKSDSTLTISTALSGVDE
KGAANNLAKEAP..........HHDFDRYRAEASLLWQRALSRIVAEKGISPRVDTIFYTALYHSLLCPTVFSDADGRYR
GADKKIHTLKTAR.KHYSTFSLWDTYRAAHPLYNILFPERAADMAESLVAFGEQNE.GLLPVWTMWAGETGMMIGYHSIP
VIVEAYRKGNYKENPQRIMR.........LLVSTMEKTGRTDTDNYRHLGYVPADC..............TNWSLSKTME
YAYDNACIALFARENAAAAKRSMAYAHHAKAYQEVYDPASGFFRPKLASGEWKLPFDP.....FEYTEDITESNAWQYLF
GVQHDTEGLMELMGGADSMARRLGLFFGTP...TPSHIALPIFST.....GMIGQYAHGNEPSHHVAYLYNKVS.QPWKG
AGIIRRILTELYKNTPDGLCGNEDCGQLSAWYVFSALGFYPVDPISGHYELGSPLFEHVTIPQ.....PNGRIFRLTAHN
LS.EKNRYIESVKVDGK..PYHRSYITWNQIRSGAHVELFMTSREGHCW
>ORF02729/10-752
...RRSILMSLLGFFLLVLSSAGCKDDVQTDIFKGPVDYVNPYMGNIS...HLLIPTFPTVHLPNSMLRMCP...VR...
...........TDYTSQLMDGLPLLLTSHRGANAFRLSPLNHLPDSIP......................AVARYTYDNE
AVRPYRYSVLLDEEDVEVDFAPSFRSAIYRLGFNADSSRHYLVVHSEKGELTAEG......N..VISGYR....Y...LQ
DSTRVFVYMETEQQ.........PVTYARRSEKGEYIWNKGKVTGKTLVLNYDLAG..........TDLFLRYGISYISV
AQAKKNLRQEIQ..........AYNVEVVSKMGRNEWNKTLGKVQIEGGTIL.QRQVFYTSLYRTYERMINISEDGHFYS
AEDHAVHPDRGIP..FYTDDWVWDTYRAVHPLRILLEPEMESDMVNSYIRMALLSREKWLPTFPEVTGDSHRMNGNHAIA
MLADAYAKGLTGFNLNEAYTVAKKVMAEKTYAPWRRMPKGTLDQFFDEKGYYPALPQDQKETDPTIHSWEKRQAVAVTLA
IAYDYWCLSRLAQFSG.HEHEAREFLRRSYDYRHLYNSETGFFHPKDEKGRFIQPFDYEFDGGPGARDYYDENNAYTYRW
DVQHNLHDLIALMDGPEQFVSFLDQTFRTP....MSTWKFNFYSKLPDQTGNVGQFSMANEPSLHIPYLYVYAG.QPWRT
QKLIHELVNEWFRNDLMGVPGDEDGGGLSAFAVFSMMGFYPVTPGLPVYVIGSPFFSKITIDLG.....GGNHLTIIANG
AG.AENKYIQKAVLNGK..TLDKAWFQHSDIAQGGILELKMGPRPNKLW
>GP|5759297|gb|AAD51077.1/1-774
RSKTMLTIRNFLLFCCLSLIAFAADAQSSVSSGRRLTEYVNPFIGTAN.....YGTTNPGAVLPNGLMSVTPFNVSGSTE
NRFDKDSRWWSAPYSADNSYCIGFSHVNLSGVGCPELSGILLMATSG........TFDP.........DYCCYGSSLSRE
YARPGEYKAVLDKYGIDAAVTVTERTALTEFAFPEGEGHILLNLGQALSNESGAS..VRFLNDSTVVGSRLMGTFCYNPQ
AVFRQYFVLQVSRRPISAGYWKKQPPMTVEAQWDSTAGKYKQYDGYKREMSGDDIGVRFSFNCDQGEKIYVRSAVSFVSE
ANALYNLEAEQEEVFKSVGGNPAKAFSAIRSRAIERWEEALGTVEVEGGTPD.EKTIFYTALYHLLIHPNILQDANGEYP
MMGSGKTGNTAHD..RYTVFSLWDTYRNVHPLLCLLYPEKQLDMVRTLIDMYRES..GWLPRWELYGQETLTMEGDPSLI
VINDTWQRGLRAFDTATAYEAMK..KN..ASSAGATHPIRPDNDDYLTLGFVPLREQ.............YDNSVSHALE
YYLADWNLSRFAHALG.HKEDAALFGKRSLGYRHYYNKEYGMLCPLLPDGSFLTPFDPKQGENFEPNPGFHEGSAYNYAF
FVPHDIQGLARLMGGAKVFSERLQKVFDEG........................YYDPTNEPDIAYPYLFSYFPKEAWRT
QKLTRELIDKHFCNAPNGLPGNDDAGTMSAWLVYSMLGFYPDCPGSPTYTLTSPVFPRVRIRLNPQYYPQGELIITTNTE
NQPTDSIYIHTVSLGNKTLPHGTRHISHADLVRCGHLRYELSNRP....
>GP|5759293|gb|AAD51075.1/1-760
PLPRMD.RPKPSYIVRIAAILCLFVGRPLFA..QSYVDYVDPLIGTLSSFELSAGNTYPVIGLPWGMNSWTPMTGVPGDG
...........WQYTYSAHKIRGFKQTHQPSPWINDYGQFSLLPLTAPQKPSSNDSIALTKWCKQLFSDEQTSWFSHKAE
TATPYYYSVYLADYDTRVEMAPTERAAIFRIRYSGNTESGSGRWLRLDAFTGGSE..ISIVDPHTVVGISRK..NSGGVP
ANFACYFILQSDTP.........MADVLLETDTGKSDEGTRAWAACRFDSQE................VTVRVASSFISV
EQAERNLAEVK...........GQSFDRIRLAGREAWNKVLGRIHVEGGTKD.ERTTFYSALYRCLLFPRRFYEEDASGN
FVHYSPYNGEVLPGYLYTDTGFWDTFRALFPLLNLLYPDENIKIQEGLLNVYRES..GFFPEWASPG.HRDCMIGNNSAS
VLADAYLKGVRVEDTRTLMNGLL..HATKAVHPKISSTGRKGWEWYNSLGYVPADAG.............IDESAARTLE
YAYNDWCILRLGRTLGWDRAALDTLAHRSMNYRHLFDPETKLMRGRNQDGSFRTPFSP.....FKWGDVFTEGNAWHYTW
SVFHDVQGLIDLMGGDRPFVSMLDSVFNTPPMFDESYYGFVIHEIREMQIADMGNYAHGNQPIQHMIYLYNHAG.HPWKA
QERLREVMGRLYRPTPDGYCGDEDNGQTSAWYVFSALGFYPVTPATDQYVLGSPIFSKVILSF.....PDGHKTVLHAPA
NS.ADTPYIRSISVEGK..EWSCNYLTHEQLRSSASIQWMMDTKPNY..