HMM Seed Alignment: TIGR01352

Download Alignment

>GP|2738770|gb|AAB94544.1/166-243
PRYPR-IARKRGIEGT-VMYEIWLDAQGNQIKQQLL-SSS--GTEALDQSALEAIKQWKFSPHILDG----VPVAHRIHI
PIRFKLE
>GP|13774063|gb|AAG23396.1/211-288
PEYPK-ASRMRRQEGT-VLLEVKLGTQGEQLQVVLL-KSS--GFPLLDRSALKAVKGWQFLPQEING----QGVSHVVRI
PVRFELT
>OMNI|NTL03PA00198/193-270
PEYPA-LAMRRGWEGT-VLLRVHVLASGSPSEIQVQ-KSS--GREALDQAAVKAVKRWSFVPAKRGD----KAEDGWVSV
PIDFKLN
>OMNI|NT01MC3137/249-326
PAYPP-RARHGRLQGS-VLLEIQVSKTGLVIGVTIL-QSS--GHLILDRTARQAVKRWSFKPALRHG----LAVAATVQV
PIHFRLN
>OMNI|NTL01XF02288/152-230
PDYPA-EAAARGDHGT-VTVRILVDAEGAPSGVEMA-KSS--GSRDLDNAALQTVRNWRFKPARNSND---QPVPGSIEI
PFEFNVG
>OMNI|NTL01XF02606/42-119
PKYPE-QLACAGIGGR-AVLKVKVGPQGKPIEVNLV-QSS--NQVALDTAAEDRVRDWEFRPATRNG----QPIAQTIQV
PVTFNPP
>SP|O34261|TONB_XANCP/146-223
PKYPP-AAFRAGVQGE-VILIVDVDANGNVTNVSVE-KSS--RNRDLDRAAMDAARKWKFNASTVNG----QKAAGRVRV
PVNFALN
>SP|P57004|TONB_NEIMB/209-280
PAYPT-LSMENDEQGT-VVLSVLVSPGGHVESVKIV-KSS--GFSRLDNAARKAAQNGHFQANAW----------TEFKV
PVKFELN
>GP|5777375|emb|CAB53383.1/188-264
PVYPM-ASKRLREEGR-VVVLVEISTQGLVDRASID-TSS--GFSRLDESALAAARKARFKPLTRNG----VAYPAKAKL
PFDFVM-
>OMNI|NTL01SS00027/337-409
PSYP---SILQGEEGS-ATVLISVNDSGGVTSVTIT-NAH--GNSEVNRQALLAARKMQFTAPAS-GQ------SKSVPV
VIHFTVA
>OMNI|NTL01PM1190/180-255
KRYPN-RARMMRKQGV-VTITFHLNNAGVISNARIS-KSS--GSEELDNAALVAVNNARPIGPLPAGM------PNEVSV
PVSFRIT
>SP|O51810|TONB_HAEDU/205-279
NAYPA-REKMMRKTGV-VTLGFTISPSGKLIDVTVL-NSS--GNQNLDAAAVQAAEATK-VAPPPIGF------PPNVTV
PIKFSIQ
>OMNI|NTL01AA00384/189-262
IKYPY-IARRMGWEGK-VILEIILSEKG-CESVRVA-HSS--GHKVLDRNAVETVKALCGKFPKPRE-------KIRLRL
PISYVLR
>OMNI|NTL01XF02328/327-399
PRYPI-EALRAGISGE-VVVEIKVGTDGSVANARVL-QST--PARVFDREALHTVKSWKFEPM---------KIIVTTRR
TLLFTPG
>OMNI|NTL01XF01958/213-292
LNYPD-EARRRRLSGR-VIITVGIRRDGSVDSSRVL-ISS--GSPLLDAAALRIVQLAQPFPPLPKTQD--NVDVLHVTR
TWLFLPA
>GP|13277329|emb|CAC34389.1/377-454
VRVPD-EYKNKSDGMT-VRIQLTINGTGRVASVSVA-RSS--GIAELDKAVLDGVRRAAPFPPLPSEWGKP---SWTFTQ
EVQVTR-
>GP|15075448|emb|CAC47004.1/231-308
IRYPA-EARRQGLRGV-AHVSFTVTSGGGVARVGIT-KSA--GSPVLDQAALETVRRAAPFPAIPAGAGRD---RWEFNI
PVAFTR-
>GP|12802723|gb|AAK08071.1/196-271
ARFLQ-GKSRNTR-GE-AHVAFVIDPSGNVLSARIA-VSS--GDPAVDQLALEAARRASPVPAPP-AAIAKA--RMPITM
PLLFK--
>GP|14571874|gb|AAK67302.1/178-257
KRYPG-DARKRARTGT-AVVTFTVNTEGTIVSSFLE-ISS--GTLSLDREAIAVLERAQPLPKPPPEILEGG--LFKVKM
PITFKLK
>OMNI|NTL02ML3202/179-255
KRYPS-AAKSRGAQGN-VNVTFTVDASGQVQSARVA-RSS--GDPDLDRAALAVLQGA-TVPAPPPEL--GA--RVSRTA
PFVFNLR
>GP|14041209|emb|CAC38751.1/200-276
HQYPS-GGGGQR--GV-ARLSFTLSRSGQVTSSRLG-GSS--GVAAFDAQAMSMIRQASPFPPFPDEI-KNG--AMSFSI
PVEFTVR
>OMNI|NTL01CJ00173/162-242
KKYPQ-EAIMQKQEGV-VRIRVSIDESGNVLSKELK-KSC--PYAALNDEALSLFKRASPLPKPPKEMLKNGD-KISFVM
PIDYNIK
>GP|15155045|gb|AAK85984.1/233-307
SAIKRRLARAAGKSGMAITVSFKIDSGGSVGGVSIL-SST--GNSAMDQKLLAVIQKTSVSPPPP-GV------NPSFTL
PVLFE--
>OMNI|PG2185/361-438
LKYPE-QSAKNSIQGR-VVVSFIVEKDGRLTNIQVE-KS---VAPELDAEAVRVISAMPKWSPGKQKDK---KVRARVNQ
PVIFRLK
>OMNI|NTL01CJ00708/153-227
LIYPR-QARKMRMSGE-VLVEFTWTKEKKLENLKIL-KPS--KYDFLNKSALETIRIASKKFPQYEK-------TFHIKI
PLVYKLS
>SP|O25899|TONB_HELPY/209-283
NRYPK-MAQIRGIEGE-VLVSFTINADGSVTDIKVV-KSN--TTDILNHAALEAIKSAAHLFPKPEE-------TVHLKI
PIAYSLK
>OMNI|HP0582/248-322
LEYPQ-VAAYLGQDGT-NAVEFYLHPNGDITDLKII-IGS--EYKMLDDNTLKTIQIAYKDYPRPKT-------KTLIRI
RVRYYLG
>GP|11127901|gb|AAG31132.1/85-161
AIYPA-QAKQDRLEAK-VALRLTLDAQGVVKTAEVL-GPV--GHG-FDEAAQEAALRFRFEPAKR-NGT---TVPARVVY
TYEFRLP
>SP|Q05740|TONB_YEREN/178-249
PTYPA-RALALGVEGQ-VKVQYDIDENGRVTNVRIL-EAT--PRNTFEREVKQVMRKWRFEA----------VAAKDYVT
TVVFKIG
>PIR|A36928|A36928/166-238
PSYPQ-RAQALRIEGD-VRVKFDVTADGRVENIQIL-SAK--PANMFERDVKTAMRKWRYEAG---------RPGTGLTM
NIKFRLN
>OMNI|NTL03PA05532/262-339
PVYPR-MAQARGIEGR-VKVLFTITSDGRIDDIQVL-ESV--PSRMFDREVRQAMAKWRFEPRVS-GGK---IVARQATK
MFFFKIE
>OMNI|VC1544/127-205
PNYPA-KALQRGVEGY-VILRFTIDELGKTRDIEVV-DAN--PKRYFEREAMLALRNWKYQPKIV-DGQP--VSQPGQTV
RLEFKLN
>OMNI|CC2327/160-239
RYYPE-SAQRRGLSGQ-VTLNCMVALNGTVRDCVVATESP--ADEGFGSAALKISRFFKMKPQTE-NGDP--VDGATVRI
PIRFNAG
>OMNI|CC3508/320-399
RFYPA-AAKAAKAEGF-AVIDCRVTATGQLTACKVLRESA--DAYGFGAAALQLGTIFQMSPLTI-DGKP--VNGGQVTI
PIRFSVP
>SP|O67790|YJ82_AQUAE/139-214
VHVPPPPVFHVKEYPSLVRIKIWVNPEGRVIRAIII-QRS--GVTEVDEGLLRFTKKLKFEPIEVPEV-------QEGVI
TFTFST-
>OMNI|PG0633/197-275
GGYPEKPRYSKPIRGT-VRVNIVVNNAGRVTDASIRLRGTNITDAAAQRAAIEAAKTTRFNAIAG-GG------DQEGVI
TYHFDIK
>SP|P50600|TOLA_PSEAE/264-343
QQWR--RPPSARNGMS-VEVLIEMLPDGTITNASVS-RSS--GDKPFDSSAVAAVRNVGRIPEMQ-QLPRATFDSLYRQR
RIIFKPE
>OMNI|NTL02ML3004/301-380
GCWTL-PVGLEGSENFVVVVRFNLDNSGKLDGRPSVEKSS--GNRQFDESAVRAVQKCDVAGLQVPAGKQD----IWNDI
RVTFDPR
>OMNI|NT01MC2438/342-420
NQWQ--RPSGDIHVGRSMMLRVQWLENGTLEWVSTV-RPS--GHEGYDETVLKAVEAVAQLPPPP-EGCTL--CLRPIYI
TMHNEQP