HMM Seed Alignment: TIGR01391
Download Alignment>SP|P57029|PRIM_NEIMB/1-416
MIPSDFIDELLAKTDIVDIIDEQ-VPLKKGGANYMACCPFHKEKTPSFSVSPTKQFYHCFSCGAHGSAIGFVMEHQGLSF
PEAVQFLADRVGMVVPKVHGQNDNPEVRAERKKKQQTLEETTAAAADFYAQQLKFNPAAK----AYLD-KRGLSAEVIAH
YGLGYAPDGWQP-------LTQVFQP---YPNTALVDTGMVIDN--EG--RHYDRFRHRIMFPIRNPRGQVIGFGGRVLD
-------DSKPKYLNSPDTPLFDKGKNLYGLYEGRAAVKEAGR------ILVVEGYMDVVALAQFGVGYGVAALGTATTA
EHVKILMRQAD---SIYFCFDGDSAGRKAAWRALENALPQL-KDDKSLHFLFL--PEEHDPDSYIRAYGKAQFEDALLNQ
SKPLSEYFWEHLSD-GIHLNTQEGKAELVKTSSPLLAQITAPALAYLLKQRLSELV
>OMNI|NTL01PM1242/4-419
SIPRTFIDDLLAKTDIVELVNSR-VKLKKAGRDYQACCPFHHEKTPSFTVSQKKQFYHCFGCGAHGNAISFLMEYDKLEF
VEAIEELAGMLGLEIPRENKPHFHG--KQINLQTKRNLYELMQEIAQFYQQQLAQHIPAQ----SYLQ-QRGLSPEVISR
FQIGFVPNSFDA-------VLQRFGQQ-KEDQQKLFDLGMLSRS-EQG--KIYDRFRHRIMFPIRDRRGKTIAFGGRVLG
-------DEKPKYLNSPESATYHKGNELYGLYEALQANESPEM------LLVVEGYMDVVALAQFGVDYAVASLGTATTA
EQIQLLFRSTE---QAICCYDGDRAGREAAWRAFENALPYL-EDGRQLKFVFL--PDGEDPDSFIRQHGKASFEQ-YMQK
ALSLSEFLFTSLAP-QVDFSSKEGKTKLAALAVPLIKKIPGDMLRLSLRNTLAQKL
>OMNI|NT01MC2749/3-419
YFPDTFLDQLKERVDIVDVIERQ-LPLKKQGRNWIGLCPFHHEKSPSFSVNQEKGFYKCFGCGASGDAIKFVQQTRGIPF
EEAIRELAAQAGLPLPQEQRQNPA---QAQAKEKRDRLRALLEESKRFFQGQLRAPNGGL--ARAYLQ-RRGLTAETISS
YELGFAPAGWRN-------LLDFFGGG-DSAIELMLEAGLLVKK-EDG--SVYDRFRNRIIFPILDSRGRCIAFGGRVLT
-------DEKPKYINSPETPLYNKSEVLYALNRAQERWSRGEM------ALVVEGYMDAVMLAEHHLTGTVATLGTAVTE
QHLKLLWQRTN---RIIFCFDGDAAGRRAAWRALERGLQGL-QADRHMQFLFL--PEGEDPDSLVQKEGVQRFKE-RANG
AYSPMQLMHKVMGE-QLDLYTPEGRAAAVHRMRPLITSVADPVLRQLYADDLGHKL
>OMNI|CC3049/2-422
RFDDRFLEELKSRLRPSDVVGKT-VKLRRQGREYAGLSPFTKEKSPSFFVNDEKGFYHCFSSGKHGDIISFLQETERLTF
AEAVERLAAEAGMSLPE---VDPR---AAREEQKRSSLGDWMELAAAWFESELRRPVGQT--ARAYLE-KRGLPESEWSR
FRIGFAPNNRTG-------LKDYLIAK-GAKPGDLVDAGVLIAP-EDG-GAPYDRFRDRIIFPIADSRGKVVSFGGRAMD
------PAARAKYLNGPETSLFHKGRVLYGLFEARKILHAGQSGGEKPPMVVVEGYMDVIACQRAGVP-AVAAMGTALTE
EQMEGLWRLHP---TPTLCFDGDKAGKRAADRAIDRALPLL-KPGRSFLFSMP--VGGKDPDDVLREQGPAALKA-QVSD
TKPFVQALFEREKE-VEPFDTPEQRTNLKVRLRTLAATIADKDLAHAYKEELLDRL
>SP|P74893|PRIM_SYNP7/5-428
RLHPETIAAVKERADIVDIVSEQ-VVLKKRGKDFVGLCPFHDDKSPSFTVSPAKQFYYCFSCGAGGNPIKFLMELGKQSF
SEVVLDLAKRYQVPVRTLEVQQHQELQ--RQLSRRERLYEVLAVATQFYEQSLRR-PE-GAAALDYLRRSRQLQESTIQK
FQLGYAPAQWAS-------LATHLIEQKRFPADLVEEAGLVVAR-RNG-QGYYDRFRDRLMIPIHDLQGRVVAFGGRTLT
-------GEEPKYLNSPETTLFEKGKLLFGLDKARAAIAKQDQ------AVVVEGYFDVIALHAAGIDHAVASLGTALSR
QQVKLLSRYSESN-QIVLNFDADRAGAKAAERAIGEVEDLAYQGQVQLRVLNL--PGGKDADEYLQRHSVADYRELLAR-
SPLWLDWQIDQLLR-DRNLDQADQFQAVVQAIVQLLGKLPNTPLRTHYVHQVAERL
>SP|P33655|PRIM_CLOAB/5-411
IIAEDIIQKVKDLNDIVDIVSEK-VKLKRTGRNYSGLCPFHHEKTPSFSVSQDKQIYKCFGCGEAGNVITFVMKTKNFSF
VEAVKYLADKVNITIDDNKDKYYAKN----KEKYDKLYSMNVEAARYFFRN-LDSNSKA----KKYFL-DRGINQKTMRR
FGLGYAKDDWRQ-------LLSFMKS-KGYTELELIEAGLIVQK--NK--AVYDRFRNRVIFPVFDYKGKVIGFGGRVLD
-------DSKPKYLNSPETKIFKKGTNLYGLNFAVKNNIG-DT------IIIVEGYMDCISLHQYGINNVVASLGTALTK
DQAKLLKRYAS---KVVISYDADTAGQAATLRGFDILREAG----FDIKIIKI--PDGKDPDEFVRKNGKEAFMRLVEN-
AVSIIDYRINRAFE-NVNLKDSE-SVIKYVKDISEIIEELDPVEKDVYIKKISDKT
>OMNI|PG1814/1-418
MIDDLTRERILDAANIVEVVSDF-VSLRKRGVNYLGLCPFHSDRNPSFSVSPAKNLCKCFACGEGGSPVHFIMKIEQLSY
SEALRYLARKYGIKIHERELTDEEKK----LKSDRESMFILNEFANDFFKNNLLNTIEGQTIGMTYFR-QRGIRPETVQK
FQLGYAPEKRSA-------FSDEAIR-KGFKPEYLVDTGLSIRY-EDS-KALDDRFRGRVIFPVQTVSGKIVAFGGRILG
KK-----DKAAKYVNSPESIIYSKSKELYGLFLAKKEIARRDK------CFLVEGYTDVISMHQSGIENVVASSGTALTQ
QQINQIHRFTS---NITVLYDGDAAGIKAALRGINLLLEQG----MHVKVALL--PDGEDPDSFARNHTVAEFEEYIEQH
ETDFIRFKTQLYLS-DMERDPIR-RAQLITDIIGSIALIPDDITRRVYVQETGQTL
>SP|Q9X4D0|PRIM_BACST/4-418
RIPEETIEAIRRGVDIVDVIGEY-VQLKRQGRNYFGLCPFHGEKTPSFSVSPEKQIFHCFGCGAGGNAFTFLMDIEGIPF
VEAAKRLAAKAGVDLSVYELDVRGRD--DGQTDEAKAMTEAHALLKRFYHHLLVHTKEGQA-ALDYLQ-ARGWTKETIDR
FEIGYAPDAPDA-------AAKLLES-HSFSLPVMEKAGLLTKK-EDG--RYVGRFRNRIMFPIHDHRGETVGFSGRLLG
-------EGHPKYVNSPETPVFRKGAILYHFHAARVPIRKRQE------ALLVEGFADVISAAQAGIDYAIATMGTSLTE
EQARILR-PCD---TITICYDGDRAGIEAAWAAAEQLSALG----CRVKVASL--PNGLDPDEYIRVYGGERFAGEAGC-
RRPLVAFKMAYLRR-GKNLQHEGERLRYIDEALREIGKLSSPVEQDYYLRQLAEEF
>OMNI|EF1521/4-428
RIPQEVIEEVRHRTNIVDIIGQY-VQLKKSGKNYMGLCPFHEERSPSFSVAEDKQIFHCFGCGKGGTVFNFLQEIEGISF
PESVKRVADLEHLSVDFDWSEPREVAD-TPENQQRRSLLQLHSKAAELYHHILVNTKIGEP-ALNYLL-ERGLTQELIET
FQIGFAPQKRDF-------LSQVFKN-EQLDETLFEPSGLFVQR-DNG--TFLDRFYQRIMFPINDPQGNVIAFSGRLLK
TADFPG-DEMPKYLNSPETTLFNKRETLFNFDRARKEIRKENT------VLLFEGFMDVIAAWQSGVKSGVASMGTSLTN
EQIRRLERVAK---EVVICYDGDNAGVQATNRAIQLLQENS---HFDLSIVSI--PEKLDPDEYVRKYGAEAFQNLANHG
RETVFSFKMNYHRL-TRNMNNEKEQLDYVNELLRELTNVQSPLERDRYLNQIAQEF
>OMNI|SA1619/2-417
RIDQSIINEIKDKTDILDLVSEY-VKLEKRGRNYIGLCPFHDEKTPSFTVSEDKQICHCFGCKKGGNVFQFTQEIKDISF
VEAVKELGDRVNVAVDIEATQSNSN---VQIASDDLQMIEMHELIQEFYYYALTKTVEGEQ-ALTYLQ-ERGFTDALIKE
RGIGFAPDSSHF-------CHDFLQK-KGYDIELAYEAGLLSRN-EEN-FSYYDRFRNRIMFPLKNAQGRIVGYSGRTYT
-------GQEPKYLNSPETPIFQKRKLLYNLDKARKSIRKLDE------IVLLEGFMDVIKSDTAGLKNVVATMGTQLSD
EHITFIRKLTS---NITLMFDGDFAGSEATLKTGQNLLQQG----LNVFVIQL--PSGMDPDEYIGKYGNDAFTAFVKND
KKSFAHYKVSILK--DEIAHNDLSYERYLKELSHDISLMKSSILQQKALNDVAPFF
>SP|Q04505|PRIM_LACLA/3-412
SLDTEVVNDLKSKVNIADLISQY-VALSRTGKNYIGLCPFHGEKTPSFNVNAEKGFYHCFGCGRSGDAIEFLKEYNQVGF
VDAVKELADFAGVTLNISDDREEK-------NNPNAPLFEINNQAARLYNILLMSTELGER-ARKYLE-ERGITDDVIKR
FNIGLAPEENDF-------IFKNLSN--KFDEEIMAKSGLFHFS--NN--KVFDAFTNRIMFPITNEYGQTIGFSGRKWQ
END----DSKAKYINTSATTIFDKSYELWNLDKAKPTISKQHE------VYLMEGFMDVIASYKAGINNVVASMGTALTE
KHVRRLKQMAK---KFVLVYDGDSAGQNAIYKAIDLIGESA------VQIVKV--PEGLDPDEYSKNYGLKGLSALMETG
RIQPIEFLIDYLR--PENLANLQTQLDFIEQISPMIAKLPSITAQDAYIRKLVEIL
>OMNI|NTL01BA00052/4-415
KIPKYFITELLSRTNIIELINTR-LELKKYGKNYQTNCPFHHDKTPSFTVSNEKQFYYCFGCNAHGNAIDFLIQYEHLSF
IESIEELALIHGVKIPFENTVQNS-----IYVK-KQKLYLLMEKICKLYKKNINVTHLAN----KYLA-RRGINQNMIDF
FLIGFSSLKWNE-------FYKKINIS-KEFEQELLINNIIATD-KNG--YIYDRFQGRIIFPIQDNHGRIIGFGGRSLN
-------DMSPKYLNSPETDIFYKRKQIYGLYQVIKKCSKPVY------LLVVEGYIDVITLTQYNIDYAVSILGTSTTT
EHIQLLFKNTD---IIICCYDGDDAGKNAAWKTLKKALPYI-SDKKTLKFILL--PNQEDPDTIIRKEGREKFQK-RIDN
AITMSKFFFKNILK-NINLSSDDDKFHLSVHALPLINTISSDTIRIYLRQILARMI
>OMNI|NTL01RP0810/25-433
RVTQEFYEFLRNRINISDVVRQK-LALTRKSSNYVGLCPFHQEKTPSFTVSDSKRFFYCFGCKASGDVIKFTSNISGLSY
NESAIKLANDYGIEIPKLTVKQKE------FYEESDNILNILELANKFFRTQLTPEIL------NYLY-KRNITETTIKE
FSIGFAPRN-NK-------FEKFFLDK-KIDITKLGQAGLIGKC-KNG--KIYNLFSNRITIPIRNIYNKIVGFGGRVLG
-------NELPKYLNSFETIVFQKSDILYGEHKAISSSYKKNR------SILVEGYFDVIALHQAGFNEVVASLGTSVTE
SHLHKLWRAGD---EIILCLDGDNAGIKASIRTINLALPLV-NSEKKISFIRL--PSGLDPDDAVNKNGADFFAK-LIDK
RISLSEMIWHIEYS-GKNFRTAEEKANLEKNLKDYCNKISDSNLKASYYRFFKDQI
>SP|P50070|PRIM_MYXXA/4-414
VIPEHKIQEVLERVDLVGLISRH-VDLKKAGREWKACCPFHQEKTPSFYVVPEKRFYFCHGCRASGDAVSFVQRYLGKTF
LDAVRDLARELGVDLEAEQDPS---------MRERQQIKEATDQAAEHFRAMLWQQDE-GRSARAYIA-SRGVSDETAMA
FGLGWAPLEWAS-------LTERFQKLG--MLEWAAKAGLVLKR-NSG-DGYYDFFRSRVMVPIRAPEGRPIAFGGRLIG
------ADEGPKYLNSRESRLYNKSETLFGMDQSRDEIRKRKA------AVLVEGYFDALGLHQVGVRHAVALCSTNLTA
GHMQVLKRAEAR--ELILLLDGDSAGLAAVERLSGPLLAAG----ATARVALL--PQGDDPDTFARREGQEGVERLLEG-
AHPLTSHLFASLLP-EGKAASFEEKMAALERLKPVVGQVPVGLVRATLFSAVAEHF
>SP|Q9X1G3|PRIM_THEMA/1-401
MIPREVIEEIKEKVDIVEVISEY-VNLTRVGSSYRALCPFHSETNPSFYVHPGLKIYHCFGCGASGDVIKFLQEMEGISF
QEALERLAKRAGIDLSLYRTEG---------TSEYGKYIRLYEETWKRYVKELEK----SKEAKDYLK-SRGFSEEDIAK
FGFGYVPKRSSI-------SIEVAEG-MNITLEELVRYGIALK---KGD-RFVDRFEGRIVVPIKNDSGHIVAFGGRALG
-------NEEPKYLNSPETRYFSKKKTLFLFDEAKKVAKEVGF------FVITEGYFDALAFRKDGIPTAVAVLGASLSR
EAILKLSAYSK---NVILCFDNDKAGFRATLKSLEDLLDYE----FNVLVATP--SPYKDPDELFQKEGEGSLKKMLKN-
SRSFEYFLVTAGEV-FFDRNSPAGVRSYLSFLKGWVQKMR----RKGYLKHIENLV
>SP|P56064|PRIM_HELPY/1-402
MILKSSIDRLLQTIDIVEVISSY-VNLRKSGSSYMACCPFHEERSASFSVNQIKGFYHCFGCGASGDSIKFVMAFEKLSF
VEALEKLAHRFNIVLEYDK----------GVYYDHKEDYHLLEMVSSLYQEELFNAPF----FLNYLQ-KRGLSLESIKA
FKLGLCTNR-ID-------YG--IENK-GLNKDKLIELGVLGKS--DNDQKTYLRFLDRIMFPIYSPSAQVVGFGGRTLK
-------EKAAKYINSPQSKLFDKSSLLYGYHLAKEHIYKQKQ------VIVTEGYLDVILLHQAGFKNAIATLGTALTP
SHLPLLKKGDP---EILLSYDGDKAGRNAAYKASLMLAKEQ----RRGGVILF--ENNLDPADMIANGQIETLKNWLSH-
PMAFIEFVLRRMAD-SYLLDDPLEKDKALKEMLGFLKNFS-LLLQSEYKPLIATLL
>OMNI|NTL01CJ01564/1-404
MITKESIENLSQRLNIVDIIENY-IEVKKQGSSFVCICPFHADKNPSMHINPIKGFYHCFACKAGGDAFKFVMDYEKLSF
ADAVEKVASLSNFTLSYTK----------EKQENKKELKSILPSLNAYFKDNLKHHKE----VLTYLY-QRALNDKDIAK
FELGFAGAS-ED-------SIRLLQNQ-KIPLEDAMSVGALKKD--ENNE-FYASFIWRITFPIYDHKDLLVGFGGRTLN
------PNVPAKYVNSPQNILFDKSRIFYAFNIAKENIAKKKE------IIVCEGYMDAIAFHKAGFNNAVAVLGTALTE
HHLPLIRRYDA---KVILCFDNDEAGLKAATRSAFLLSTNK----IDGKVAIL--QGGKDPAELVAKNESTKLHNILDE-
GIELGEFYIRRLIS-THSIISALDKQKALETIQKFTFNLE-PLVANSYTSLVSNLL
>SP|Q9Z6W4|PRIM_CHLPN/1-411
MYTEESLDNLRHSIDIVDVLSEH-IHLKRSGATYKACCPFHTEKTPSFIVNPAGAHYHCFGCGAHGDAIGFLMQHLGYSF
TEAILVLSKKFQVDLVLQPKDSGYTP----PQGLKEELRHINSEAETFFRYCLYHLP-EARHALQYLY-HRGFSPDTIDR
FHLGYGPEQSLF-------LQAMEER--KISQEQLHTAGFFGN--------KWFLFARRIIFPVHDALGHTIGFSARKFL
EN-----SQGGKYVNTPETPIFKKSRILFGLNFSRRRIAKEKK------VILVEGQADCLQMIDSGFNCTVAAQGTAFTE
EHVKELSKLGVL--KVFLLFDSDEAGNKAALRVGDLCQTAQ----MSVFVCKL--PQGHDPDSFLMQRGSSGLIALLEQ-
SQDYLTFLISEKMS-SYPKFGPREKALLVEEAIRQIKHWGSPILVYEHLKQLASLM
>SP|O83505|PRIM_TREPA/3-414
RISAHVIDAIADRVDLVSLVGNY-THLERRGDDWWGRCPFHHERTPSFHVVPDKKMYYCFGCGVGGSTIKFFMEIEKIDF
HEAAVRLAKRAGIEMSFEDGVHAPS----AHASFTMQLCEVYQRIAETFHHVLMHTAQGARAR-AYLA-SRKVTDDSIRT
FKLGYAPPDPVW-------LFQFLRHK-GYSPEFLARSGLFAKK--SE---RIAVFSDRIMYPIADRYGQVIAFGARALG
-------TAPAKYLNTADMPQYKKGEHLFAFHCALSQMRKTRA------AIICEGYMDVIAFHQAQLTYAVAPLGALLTK
SQARLMRSFVD---RIYMCFDADGAGRAATYKAILLCRSLG----FEVRIVEL--NGGTDPAECACIEGEDALRKSVER-
STTDAQYLIRCARH-EHSHLGADDTSRAVSFLFPYLSVLDSAIQREQVMQDIAMAF
>SP|O51653|PRIM_BORBU/1-416
MKYLQTVASMKSKFDIVAIVEQY-IKLVKSGSAYKGLCPFHAEKTPSFFVNPLQGYFYCFGCKKGGDVIGFLMDMEKINY
NDALKILCEKSGIHYDDLKISRGS-----ENKNENKDMVSKIYSLNSRLINTIKFFLSKNKKALDYVLKSRAISKEIVDL
FELGYLPFNFKNG----LELHDFLVS-KGYSSEVLRKSGLFSKT--N---PKVSILFQRLIFPIKDFKGNVVGFGGRDLD
-------GKGSKYINLGETEVFKKRELLYGFYEGFEEIKSTKS------VILVEGYIDVLAFFTSGIKRAVSTLGTAFSK
EHLALIQRYAD---EIIFSFDGDDAGLSATLKAYQICLPFN----INVSVVRM--DFGTDPADVLKSEGVDSLQKILNN-
RCDAFEYLLDVYSN-KYNLNKTVDLNAMINLFLNLINLSKVDTQKKIFLDKLSNKL
>SP|P75426|PRIM_MYCPN/1-427
MTSPTSLDQLKQQIKIAPIVEHYAIKLKKKGKDFVALCPFHADQNPSMTVSVAKNIFKCFSCQVGGDGIAFIQKIDQVDW
KTALNKALSILNLDSQYAVNFYLK-----EVDPKLKRYWDLHSALVDYYQTRLKLEP--KEQGLTYLTETRKLSPQVIER
FQLGLAFTLEDQYFLPSLLNYPWISPAIEKAELCFATEKFPEALGFFNQQTHYATFKSRIMIPIHDLKGNPVGFSGRALQ
K------TEKIKYKNSAEHQWFKKSELLFNFHRIDKNTLK---------LYLVEGYFDVFALTSAGIGDVVGLMGLALSE
SHIIAFQQQLKALETVVLALDNDTAGHDATFKLLQELNAHG----IIVEVVDWNQAAYKDWDELFLAEGSDAVKAKTHR-
VLNLVEYLVAYFK--TKGFDERITVNKVIDIIAQNQKVTADTSFSRFLCQKLQQLL
>GP|14089867|emb|CAC13626.1/2-412
NNLWEIEKKILEKTTLSNLIGKL-ISIKPKGKSFWALCPFHDDKNASLSISDQKAMFSCFSCNVRGGLFVFYSKFLNKSY
VEVANMLAKEFDLDFHFDQQEKEK------YNENEQLFIDVTSIANHYFKVSLKSQVHSNSKLVDFLK-SRGISRETASE
FEIGYDDGN-----------FWKIPNKEKKNFSFFLSNNLIVKK--ETN-QYYDFFYKRVVFPIHNSFGDVVGFSGRALD
-------ENNIKYLNSPESLVFKKHKILYNWAKAKEKAIQEKK------LYITEGFMDTIALYKIGIKNAIAIMGTNLSN
EQLELIPKDIE----LIFFLDGDQAGKNAVYNILKKIIKMR----SKISVIEN--DSKQDPDELLKQKGANFLKELIEKN
KKPAIDYLYEFLLTSKYNINNSEHLISFVNDFAPLLSSQNNIVIDKYENLLMKHSI
>SP|Q9PPZ6|PRIM_UREPA/3-425
KITNNVFLTIRNAINISDVIQNY-IKVIKKGNNYWAICPFHNDTNESLSINDKKQIFKCFACNHAGDVIKFVAEYKKISY
ALAAQEIVQLMNLDLNLLNHLQKIS----PQEIKKNKVFDLNKQIQKWFINFLNNKN--NIHVIDYLT-KRNLNKNDLAY
FKIGYAPNNDELLNLIKSNYNNLIQENDEFELNKLIENSFLVID-KNG--NYHDFFNDRIIFSIYDHLNNVVGFSGRIIT
N------EKTPKYLNTKTTAVFKKDEVLYNFHNVITIENNHQ-------LFIVEGFMDVITIHKSNKPNVVATMGVELTN
KHLELIKSYGIK--DLILCFDNDQAGFLATKKQIMKLINSP--FNIFIVNHKD--NDCKDMDEYANKHGYSATSKLLDQ-
QLHISEFLLLEIS--NTNKSTPSLKHSYKQECFTIIKKYGDIFYVDKYVDFMKQTF