HMM Seed Alignment: TIGR01393

Download Alignment

>SP|O67618|LEPA_AQUAE/4-600
KNVRNFCIIAHVDHGKSTLADRLLEYTGAISEREKREQLLDTLDVERERGITVKMQAVRMFYK.AKDG..NTYKLHLIDT
PGHVDFSYEVSRALAACEGALLLIDASQGIEAQTVANFWKAVEQDLVIIPVINKIDLPSADVDRVKKQIEEVLGLDPEEA
ILASAKEGIGIEEILEAIVNRIPPPKGDPQ.KPLKALIFDSYYDPYRGAVAFVRIFDGEVKPGDKIMLMST.GKEYEVTE
VGAQTPKM.TKFDKLSAGDVGYIAASIKDVRDIRIGDTITHAKNPTKEPVPGFQPAKPMVYAGIYPAEDTTYEELRDALE
KYAINDAAIVYEPESSPALGMGFRVGFLGLLHMEIVQERLEREYGVKIITTAPNVIYRVKKKFTDEVIEVRNPMDFPDNA
GLIEYVEEPFVLVTIITPKEYVGPIIQLCQ.EKRGIQKNMTYLDPNTVYLEYEMPLSEIIVDFHDKIKSISRGFASYDYE
FIGYRPSDLIKLTVLINKKPVDALSFIVHADRAQKFARRVAEKLRETIPRQLFEVHIQVAKGGKVIASERIKPLRANVTA
KCYGGDVTRKKKLLENQKEGKKRMKQFGKVQLPQEAFLSVLKVE
>SP|Q9X1V8|LEPA_THEMA/21-616
DLIRNICIIAHIDHGKTTLVDRILEITNTVDRRKMREQYLDMMDIERERGITIKAQPVKVMYT.AEDG..NTYEINIIDT
PGHVDFSYEVGRSMAACEGAILLVDATQGVEAQTVAHTYLAIEHDLEIIPVINKIDLPNANIEETALEIKDLLGVSENEI
LLVSAKEGTGVKELLEAIVKRVPPPKGDIN.GKLKALIFDAKYDNYKGVIVHVRLFDGQVKPGDKIMTFSN.KKVYEVQE
VGVFLPEM.EPVDSLSAGEVGYIIAGIKEVSDARVGDTITSANDPVDEALPGYREIKPMVFAGMFPGLPEYYEELRKALE
KLKLNDSALYFEPTMSPAMGFGFRCGFLGPLHMEVVRERIEREFDLAVILTAPNVRYRVKLR.NGEEIEITDPSKFPD.E
GEILEAYEPYVDLSIITPSEYIGAIINLVQNEKRGELRITENAGKNRVILRFDAPLAEIIYDFFDRMKAVSRGYASMDYE
FKEYRRSDLVKVTILVNKEPVDALSFIVHRSKAYQMARKIVEKLKDLIPRHQFQIPIQAKAGGRIIARADIKALRKDVLA
KCYGGDVTRKMKLLEKQKEGKKKLREIGRVTIPQEAFLALLKIG
>SP|P37949|LEPA_BACSU/12-606
SRIRNFSIIAHIDHGKSTLADRILEKTSAITQREMKEQLLDSMDLERERGITIKLNSVQLKYK.AKDG..EEYIFHLIDT
PGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPSAEPERVRQEVEDVIGLDASEA
VLASAKAGIGIEEILEQIVEKVPAPTGDPE.APLKALIFDSLYDAYRGVVAYIRVVEGTVKPGQKIKMMAT.GKEFEVTE
VGVFTPKA.TPTNELTVGDVGFLTASIKNVGDTRVGDTITSAANPAEEALPGYRKLNPMVYCGLYPIDTAKYNDLREALE
KLELNDSSLQYEAETSQALGFGFRCGFLGMLHMEIIQERIEREFNIDLITTAPSVIYDVYMT.DGEKVVVDNPSNMPD.P
QKIERVEEPYVKATMMVPNDYVGAVMELCQ.GKRGNFIDMQYLDANRVSIIYDMPLAEIVYEFFDQLKSSTKGYASFDYE
LIGYKPSKLVKMDIMLNGEKIDALSFIVHRDYAYERGKVIVEKLKELIPRQQFEVPVQAAIGQKIVARSTIKAMRKNVLA
KCYGGDISRKRKLLEKQKEGKRRMKQVGSVEVPQEAFMAVLKMD
>OMNI|NTL01UU00330/4-599
KFIRNFSIIAHIDHGKSTLSDRIIEFTNTLSKREMTNQILDSMDIERERGITIKLNAVQIKYH.AKDK..HEYLIHLIDT
PGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLSNVYLALENNLEIVPTINKIDLPSADPNRVKKEIEDVIGLDTADV
PLISAKTGLNIQDVLEAIIKHVPPPLDAKDDAKLQALIFDSFYDSYKGVVCLVRVKQGTIKVGDKIRMMAN.NKDYIVSE
LGIRTPKI.VNKTELVAGEVGWVAAAIKTVKDINVGDTITHTNNPADKPLPGYKKILPMVYCGLYPIDTSQYDDLKEAMA
KISLSDAALTYEYETSQALGFGIRCGFLGLLHMDVIRERIAREFNIELILTAPSVIYKIELT.NNQEISIDSPAKMPE.P
TSIKLIKEPFVKLAIITPDNYVGAIMELCQ.SRRGIYDDLEVIDGTRRKLIYKMPLAEIMYSFFDSLKSITKGYATMDYE
LIGYQAEKLVKIDIMLNGNKVDALSIIAHRDFAYGKSKIICERLKEVIPKHQFEIPIQASIGSKIIARETIKAVRKDVIA
KCYGGDVSRKKKLLEQQKEGKKRLKAIGNVDVPQDAFVKVLSEN
>GP|14089660|emb|CAC13420.1/18-607
SKIRNFSIIAHIDHGKSTLADRILEITQTVSTRELKAQHLDSMDLEQERGITIKLNAVQIKYK...D.....YIFHLIDT
PGHVDFTYEVSRSLAASEGALLLVDATQGIEAQTLANAYLALENNLKIIPIINKIDLPSADPERIKGEIEEVIGISAKDT
ILISAKSGLNVEKVLEEIVDKISYPIDADDDKPLKALVFDSYFDAYRGVILLVRIFEGKIAVNDQFKFIST.NKQFHVIE
LGVRTPTE.VKKPFLESGEVGWIAASIRDAKDVSVGDTLTLVKNPTKEALPGYKKVKAVVFTGFYPIDGKDYPVLKESLE
KISLSDSSITWELESSKALGFGFRVGFLGMLHMEVLQERLKREFNIDIIATAPSVEYKVYLT.NNKVEIVSNPSDLPD.R
NYIKNIKEPFIRSFILVTEEFIGGIMELCQ.SKRGVYVNIEYID.KRVKIIYELPLSEIILDFFDKLKSISKGYASFDYE
FIEYRDADLVKVDILLNKEKVDAFSFISHRENAYERSKELALKLKDVIPKQSFEIPIQAIIGAKVIARETIKAYRKDVTA
KLYGGDVTRRQKLLKKQKEGKKRMKSIGSVEVPQEAFLSVLKSN
>OMNI|NTL01PM0065/2-595
KNIRNFSIIAHIDHGKSTLSDRLIQTCGGLSDREMEAQVLDSMDLERERGITIKAQSVTLNYK.AKDG..ETYQLNFIDT
PGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTAIEMNLEVVPILNKIDLPAADPERVAEEIEDIVGIDAMEA
VRCSAKTGVGIEDVLEEIVHKIPAPEGDPN.APLQALIIDSWFDNYLGVVSLVRIKNGTLRKGDKIKVMST.GQSYNVDR
LGIFTPKQ.VDTTILNCGEVGWVVCAIKDILGAPVGDTLTSHNNPASSVLPGFKKVKPQVYAGLFPISSDDYEAFRDALG
KLSLNDASLFYEPENSTALGFGFRCGFLGLLHMEIIQERLEREYDLDLITTAPTVVYEVEKT.DGEVIYVDSPSKLPP.L
NNITEIREPIAECNMLLPQTYLGNVITLCV.EKRGVQTNMVYHG.NQVALTYEIPMGEVVLDFFDRLKSTSRGYASLDYG
FKRFQAADMVRVDIMINGERVDALALIVHKDNAPYRGRELVEKMRELIPRQQFDIAIQAAIGNHIIARSTVKQLRKNVLA
KCYGGDVSRKKKLLQKQKEGKKRMKSLGNVEVPQEAFLAILHVG
>OMNI|NT01MC4363/4-598
DHIRNFSIIAHIDHGKSTLADRLIQFTGALSERDMKEQVLDSMDIERERGITIKAQSVRLNYK.AKDG..KTYVLNLIDT
PGHVDFTYEVSRSLAACEGALLIVDAAQGVEAQTMANVYLALEHDLEIIPVLNKIDLPSAEPERVREQIEEVIGLDASEA
ILASAKSGIGIEEILEAIVKRVPPPKGDLD.APAKALVVDSWYDNYLGVVSLARVYDGVLKAGEKIRFMGV.GMDYPLDN
VGFLTPVL.TKVAELKAGEVGCIMAGIKKLSDARVGDTITTVRRPCASQLPGFQPAKSMVFAGLYPVDSADYEDLKDALE
KLAINDASLNYEVETSPALGFGFRCGFLGMLHMEIIQERLEREFDLDLVTTAPTVVYRVKQT.DGQIMDIRSPGDLPP.T
TKREYIEEPYILANIMVPAEYMGPVMQLCT.DRRGTQKDMSYISDTRVMVQYEMPMSEVVMDFFDRLKSMTKGYASLDYH
LLDYRMSDLVKLDILINGDPVDALSVIVHRNISQYRGRELAKKMKELIHRQMFDVAVQACIGGKIIARETVKALRKNVTA
KCYGGDITRKRKLLEKQKAGKKRMKQVGKVEIPQEAFLAVLKVD
>GP|6968466|emb|CAB73286.1/4-598
KNIRNFSIIAHIDHGKSTLADRIISECGAISDRQMSSQVMDTMDIEKERGITIKAQSVRLNYK.FN.N..ENFVLNLIDT
PGHVDFSYEVSRSLASCEGALLVVDASQGVEAQTIANVYIALENNLEIIPVINKIDLPNADVEKVKHEIEHIIGIDCKDA
ICVSAKTGVGIKELIETIITKIPAPKTDDE.APTKALIYDSWFDNYLGALALVRIYEGSIAKNDEVLVMST.DKKHIVQD
LFYPHPLSPIKTQSLQSGEVGVVVLGLKTVGDVQVGDTITLVKNKAKEAIGGFEKAKAFVFAGLYPIETDKFEDLRDALD
KLKLNDSSITYEPETSLALGFGFRVGFLGLLHMEVIKERLEREFNLDLIATAPTVTYEIYQT.DGELIKIQNPSELPP.V
NKIDHIKEPYVKATIITPSEFLGNLITLLN.RKRGVQVKMDYITPERVLLEYDVPLNEIVMDFYDKLKSLTKGYASFDYE
PIEFRVGDLVKLDIKVAGENVDALSIIVPNEKAQSKGRELVSAMKEIVPRQLFEVAIQASIGNKIIARETVKSMGKNVTA
KCYGGDITRKRKLLEKQKEGKKRMKAIGKVNLPQEAFLSVLKID
>SP|Q9RV84|LEPA_DEIRA/12-605
SQIRNFSIIAHVDHGKSTLADRILEQLGAMGERDKRDQTLDTLELERERGITIKSTPIRLEYTR.ENG..EGYVFNLIDT
PGHVDFNYEVSRSLAACEGVLLLVDASQGVEAQTIVNAYLAIDNNLEIVPVINKIDLPAADPEGAARELEEVIGIPAEDA
VRASGKTGIGIPEILEAVVERIPPPAGDPG.APLKALIFDSFFDAYQGVILFVRVLEGTMKAKDGVRLMNA.GKNFEVDK
VGTFSPGL.VVGQELSAGMVGWVAAGIKDIQDAQVGDTLTGSDRQTAEPFPGFKPAQPVVFSGLYPTDTEDYRKLRDALE
KLKLNDAAFSFEPETSEALGFGFRCGFLGLLHAEIIQERLEREYDLDLIATAPAVVYRVTLT.NGEIFETQNPAEFPT.R
DRIEKVEEPYIKLSVMLPEDYVGPVMQLLQ.ERRGSMQTMNYVGK.RVELVYEVPFAEILYDFHDRLKSISRGYASMDYE
QLGYREGDLRKVDIMVNNEVIDALAVIVHESKTYSLGRKIVDKMAEVIPRQMFPVPVQAVIGAKIIARATVKAYRKDVLA
KCYGGDISRKKKLLEKQKKGRARMKQFGTVEVPQEAFLAVLSTE
>SP|P53530|LEPA_MYCLE/42-638
AQIRNFCIIAHIDHGKSTLADRMLQLTGVVDERSMRAQYLDRMDIERERGITIKAQNVRLSWSVTAGGTTENYVLHLIDT
PGHVDFTYEVSRALEACEGAVLLVDAVQGIEAQTLANLYLALERDLTIIPVLNKIDLPAADPDRYAAEIAHIIGYESGDV
LRVSGKTGEGVSDLLDEVVRRVPHPQGDPD.APTRAMIFDSVYDIYRGVVTYVRVVDGKISPRERIAMMST.GATYELLE
VGIVSPEP.KASAGLGVGEVGYLITGVKDVRQSKVGDTVTTVRYGATEPLTGYREPKPMVYSGLYPVDSSDYPSLRDALG
KLQLNDAALTYEPETSVALGVGYRCGFLGLLHIDITRERLEREFDLDLISTSPNVVYRVVTE.DNTEIVVTNPSDWPE..
GKIRTVYEPVVKITIIAPSEFIGTIMELCQ.SRRGELGGMDYLSPERVELRYIMPLGEIIFDFFDSLKSRTRGYASLDYE
EAGEQEAQLVKVDILLQGEAVDAFSAIVHKDSASAYGNKMTNKLKELIPRQQFEVPVQAAIGSKVIARENIRAIRKDVLS
KCYGGDITRKRKLLEKQKEGKKRMKTIGRVEVPQEAFVAALSAD
>OMNI|PG1241/2-595
KNIRNFCIIAHIDHGKSTLADRLLEYTNTVSGKDLQDQVLDNMDLERERGITIKSHAIQMDY..EMDG..EKYVLNLIDT
PGHVDFSYEVSRSIAACEGALLIVDAAQGIQAQTISNLYMAIENDLTIIPIVNKVDLPSAMPEEVEDQIIELLGCDRSEI
IRASGKTGQGVDQILRAIVEQVPAPAGDPD.APLQCLIFDSVFNPFRGIIAYFKVVNGSIRKGDHVKFIAT.EKEYDADE
VGVLRLDMEPRS.EVKTGDVGYIISGIKTSREVKVGDTITHVAKPAKEAIAGFEEVKPMVFAGVYPIEAEDFENLRASLE
KLQLNDASLTFQPESSVALGFGFRCGFLGLLHMEIVQERLDREFNMNVITTVPNVSYKVYDK.KGGCKEVHNPSGLLE.P
TLIDHIEEPFIRASVITNTAYIGPIMTLCL.GKRGVLVKQEYISGDRVEIFYDLPLGEIVIDFYDKLKSISKGYASFDYH
LHDFRESKLVKLDILLNGEPVDALSTLTHVDNSVTFGRRMCEKLKELIPRQQFEIAIQAAIGAKIIARETIKPVRKDVTA
KCYGGDISRKRKLLEKQKEGKKRMKQIGTVEVPQKAFLAVLKLD
>OMNI|TC0334/7-602
ENIRNFSIIAHIDHGKSTIADRLLESTSTIEQREMREQLLDSMDLERERGITIKAHPVTMTY..EYEG..ETYELNLIDT
PGHVDFSYEVSRSLAACEGALLIVDAAQGVQAQSLANVYLALERDLEIIPVLNKIDLPAAQPEAIKKQIEEFIGLDTSNA
IACSAKTGQGIPEILESIIRLVPPPKPSQE.TELKALIFDSHYDPYVGIMVYVRVISGEIKKGDRITFMSTKGSSFEVLG
IGAFLPEATLIEGSLRAGQVGYFIANLKKVKDVKIGDTVTTVKHPAKEPLEGFKEIKPVVFAGIYPIDSSDFDTLKDALG
RLQLNDSALTIEQESSHSLGFGFRCGFLGLLHLEIIFERISREFDLDIIATAPSVIYKVVLK.NGKTLFIDNPTAYPD.P
ALIEHMEEPWVHVNIITPQEYLSNIMSLCM.DKRGICLKTDMLDQHRLVLSYELPLNEIVSDFNDKLKSVTKGYGSFDYR
LGDYKPGAIIKLEILINDETVDAFSCLVHRDKAESKGRSICEKLVDVIPPQLFKIPIQAAINKKIIARETIRALAKNVTA
KCYGGDITRKRKLWEKQKKGKKRMKEFGKVSIPNTAFVEVLKME
>SP|O51115|LEPA_BORBU/10-604
IRKKNFCIIAHIDHGKSTLADRFIQKAKIISDRDFKSQMLDSMDIERERGITIKSQAVTITYK.SNDG..DFYELNFVDT
PGHVDFSYEVSRAISSCEGALLLIDASQGIQAQTVSNFYMAFEHDLEIIPVINKIDLPNANVDFVKKQIKNDLGLNEEIA
ISISAKNGIGIDDLLEAICKYVPSPRGSIK.DPLRALIFDSHYDSYRGVVVHFRIFEGQIKMGDKIRLMHT.NSEHLIEE
IGIFKISLERKD.TLEAGDVGYFIAGIKNISDVKIGDTVTLCDFPALSPLEGFKEVKPVVFSSVYPVDANQYDDLLKAMD
RLKLNDASLTFEKDSSSALGHGFKCGFLGLLHLEVIQERIEREFNLNVILTSPSVRYKIIPK.KGESYFIETPEQFPG.N
EAIESVLEPYIKANIIVPTEFLGNIMSVCL.LKRGVQTNLIYLDTKRVELIYKMPLSEILFDFYDKIKSVSRGYASFDYE
LLDYEYTDLVRLDILVNGDRVDALSQLVFKDSARTKAIGICKKLKDEIARQQFRIAIQGAIGSNVIARETISPVRKDVTA
KCYGGDITRKRKLLEKQKEGKKRMKMVGNVEIPQSAFLAVLKSN
>SP|O83523|LEPA_TREPA/8-602
RRVRNFCIVAHIDHGKSTLADRLIERTRAVEERLQHAQMTDNMELERERGITIKSHAVCIPYT.DAHG..TEYVLNFVDT
PGHADFAYEVSRAIAACEGALLVVDATQGVESQTISNLYLVLEHNLEIIPVINKIDLPTADVPRVLQQVEHDLGLDPASS
VLISAKTGENVDALFDAIITRIPPPQGSGT.AALQALVFDCHYDQYRGVVVHIRVFEGQVTSGMVIRFMSN.GAEYRVEE
TGVFVFNLIARE.ALCAGDVGYLSANVKTVSDVQVGDTITDASCPCDTPRAGFRRVKPVVFSSVYPVDTDECEQLREALE
RLALNDASISWERDSSLALGHGFRCGFLGLLHLEVVQQRLEREFNQTVIFTAPQVQYYVFLK.TGQRIVCDNPAHYPL.E
QEIAQVHEPYIRATIITPTEVLGAVMTLCI.EKRAYQTAVNYLDQKRVELVYEMPLAEILFGFYDRLKSISHGYASFDYE
LIESKLTDLVKVDILINGKPVDALAQLCYRPHARRRAQAVCARLKEEISRQQFKIAIQGSIGGQIISRETVSPFRKDVLA
KCYGGDITRKRKLLEKQKEGKKRMKMVGDVEIPQTAFLSVLKEA