HMM Seed Alignment: TIGR01443

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>SP|P26345|RECA_MYCTU/670-692
RTFDLEV----EELHTLV----AEG-VVVHNC
>SP|Q58191|Y781_METJA/548-573
HIYDLTV----EDNHTYIA-GKNEG-FAVSNC
>OMNI|NTL01SS00969/538-560
KVYDLEV----EDNHNFV----ANG-LLVHNC
>OMNI|NTL01PA00693/587-611
YVYDLEV---ENEGHSFVA---ADG-ILVSNC
>GP|5458808|emb|CAB50295.1/628-650
YLYDLTV----DINHNYV----ANG-IVVSNC
>SP|P35901|RECA_MYCLE/549-571
NRFDIEV----EGNHNYF----VDG-VMVHNS
>SP|O53152|YE61_MYCTU/590-612
PVYNLDV----ENPDSYL----AYG-FAVHNC
>SP|Q60348|Y043_METJA/499-521
FVYNLEV----EDDSSYV----TVS-GTLHNC
>SP|Q57962|PPSA_METJA/792-823
EVYNITVKAENEFNHNYVVWTKHYTPIVVFNC
>OMNI|NTL01MT00648/378-400
DVYDATV----YGASAFT----ANG-FIVHNC
>OMNI|DR2374/869-891
AVYDVTV----EQVHAFD----ANG-VLAHNC
>SP|P71715|DNAB_MYCTU/794-816
HVFDGTV----SGTHNFV----ANG-ISLHNS
>SP|Q55418|DNAB_SYNY3/788-810
EVFDLTV----PGPHNFV----AND-IIVHNS
>OMNI|NTL01PA01421/477-499
WVYDLQV----PGYHNFL----ANG-IFVHNS
>OMNI|NTL01SS01142/849-872
DVYDIEV----PHTHNFAL---ASG-VFVHNS
>OMNI|NTL01ML0595/566-588
PTYDIQV----VGLENFV----ANG-IVAHNS
>OMNI|NTL01PH00825/1343-1364
KLYDFT-----TTTENFI----SNG-IVSHNC
>SP|Q58095|Y682_METJA/563-586
KLYDVGI---VSKEHNFI----ANS-IVVHNC
>OMNI|NTL01PA00558/511-534
KFYDIGV---YHEAHNFI----ANG-IVVHNC
>OMNI|MJ1422/1646-1668
DVYDITC----HKDPSFI----ANG-FVSHNC
>OMNI|NTL01PA01588/1658-1680
LVYDFTV----PEHHMYI----SNG-FMSHNC
>OMNI|MJ1512/1339-1361
YVYDLSI----KHNQNFI----SNG-VISHNC
>SP|Q58445|RPA1_METJA/889-912
YVYDITT---ISETHNFI----ANG-FLTGNC
>SP|Q57710|IF2P_METJA/556-577
YVYDLT-----TETHNFI----ANG-IVVHNT
>OMNI|NTL01PA01742/647-670
EVYDVTT-----ETHNFIG---GNMPTLLHNT
>SP|Q58815|YE20_METJA/552-574
YVYDLEV----EDYHNFI----GNL-IINHNS
>OMNI|MJ1422/578-602
TIYDLHV----PRYHNFIG---GNLPTILHNT
>GP|9229839|dbj|BAB00608.1/384-409
DVYDLMV---PDYGYNFIG---GNGLIVLHNT
>SP|O59610|DPOL_PYRHO/929-953
YVYDLSV----EDNENFLV---GFGLLYAHNS
>SP|Q58242|Y832_METJA/768-791
YVYDLSV----EDNENFIT---ATG-ILCHNT
>SP|Q58446|RPA2_METJA/524-547
YVYDISV----EGLETFTT---FDG-VLTHNT
>SP|Q58242|Y832_METJA/1568-1592
YVYDISV----EGTENFIG---GEGFICLHNT
>OMNI|NTL01AP00779/620-644
FVYDLSV----EGDENFFA---GLGWILVHNS
>OMNI|MJ1422/1039-1063
FVYDVSV----PNNEMFFA---GNVPILLHNS
>SP|Q58192|TF2B_METJA/411-435
YAYDLTV----PNAENFVA---GFGGFVLHNT
>SP|Q58295|DPOL_METJA/773-795
EVYDLTL----EGRPYYF----ANG-ILTHNS
>GCBORF0889/514-536
EVYDLTV----PKYASWL----ADG-VVSHNS
>OMNI|NTL01HS01672/443-465
WVYDLEV----EGTHSYL----TDG-VVSHNS
>OMNI|NTL01PA01588/676-701
TFYDLTV----DKYQNYLA--GENGMIFVHNT
>GSEORF1463/740-762
DVYDTTQ----EDYHSLI----FNG-IVTGNC
>OMNI|NTL01PA01588/1139-1161
HVYDLQV----EDVHLLT----GNG-IYTSNS
>OMNI|NTL01HS01799/1099-1121
HTYSLTV----AETNTLV----ANG-LFTGQC
>NTL01PA01562/533-554
VTYNLT-----TEKGNLL----ANG-LFVKNS
>SP|Q58524|HELS_METJA/813-839
YAYDIEL---PDDGSNSHY-IVANG-FIVHNS
>NTL01SS00664/14-37
RIFDIGL----PQDHNFLL---ANG-AIAANC
>SP|Q57532|GYRA_MYCLE/528-551
PVFSLHV---DTEDHSFL----TNG-FISHNT
>OMNI|DR1259/134-158
PAQCIAV----DAPDHLYV---TEGYIVTHNT
>MAORF0097/535-560
AVRCVEV----DNDSHMYL--ASRAMVPTHNS
>SP|Q58454|YA54_METJA/693-715
YVYSVET----ENSLLIT----SYG-ILIHNC
>SP|O67475|RIR2_AQUAE/551-576
KVYCVSV----PKGNIVVR--YKDSVCIAGNC