HMM Seed Alignment: TIGR01460

Download Alignment

>SP|P36151|YK50_YEAST/16-306
FAFDIDGVLFRGKKP..IAGASDALKLLNRN....KIPYILLTNGGGFSERARTEFISSKLDVDVSPLQIIQSHTPYKSL
VN....KYS..RILAVGTPSVRGVAEGYG.FQDVVHQTDIVRYNRDIAPFSG....LSDEQVMEYSRDIPDLTTKKFDAV
LVFNDPHDWAADIQIISDAINSENGMLNTLRNEKSGK...PSIPIYFSNQDLLWANPYKLNRFGQGAFRLLVRRLYLELN
GEPLQDY..TLGKPTKLTYDFAHHVLIDWEKRLSGTKPSTSPFHAVFMVGDNPASDIIGAQNYGWNSCLVKTG
>GP|7019640|emb|CAB75787.1/41-335
IAFDIDGVILLGSSP..VGGSPSALRRLYDDSGALKIPFLFLTNGGGLPESKRASEMSHLLGVQVSPLQVIQAHSPFRKL
VN....RFENELVVAAGKGEPAAVMSNYG.FKNVISMDEYASYFDNIDPLAPYKKLMFRQDGHKELRSREDVLSQRVQAA
FIVSDPVDWSRDIQVLCDILRTGG.....LPGKEIG....PQPHLYIANDDLDYQTEFPTERLGMGAFRIALESIFNRIH
EKPLEYT..SFGKPNPFVFKNAEDVLKEIATSPYSSNQGSHHFKTLYMIGDNPKIDIRGARQAGWFSILTRTG
>GP|13344995|gb|AAK19151.1||AF2/19-305
FLLDIDGVLVRGHRV..IPAALKAFRRLVNSQGQLRVPVVFVTNAGNILQHSKAQELSALLGCEVDADQVILSHSPMKLF
SE....YHEK.RMLVSGQGPVMENAQGLG.FRNVVTVDELRMAFPLLD........MVDLERRLKTTPLPRNDFPRIEGV
LLLGEPVRWETSLQLIMDVLLSNG.....SPGAGLATPPYPHLPVLASNMDLLWMAEAKMPRFGHGTFLLCLETIYQKVT
GKELRYE.GLMGKPSILTYQYAEDLIRRQAERRG....WAAPIRKLYAVGDNPMSDVYGAPELGCISILVCTG
>SP|P15302|NAGD_ECOLI/6-223
VICDIDGVLMHDNVA..VPGAAEFLHGIMDKG....LPLVLLTNYPSQTGQDLANRFAT.AGVDVPDSVFYTSAMATADF
LR....RQEGKKAYVVGEGALIHELYKAG.FT..........ITD............VN..................PDF
VIVGETRSYNWDMMHKAAYFVANG..................ARFIATN........P..DTHGRG.FYPACGALCAGIE
KISGRKP.FYVGKPSPWIIRAALNKMQAHSEET............V.IVGDNLRTDILAGFQAGLETILVLSG
>GP|15321582|gb|AAK95491.1/7-227
VLFDIDGVLVTSWKP..VPGAVEALAEVRRRGG...V.RAFLTNTTSRTCDEIAAALGA.AGFDVRPEEIVTAARLTTEY
LRS...TYPGEPVLLLNHGDIRADMPDVE.FDD.........VDP................................RVV
VIGGAGPEFTHEALSRVLDLMVSG..................VPVVAMHRALMWS..E....S.DG.LRLDTGAYLPGLE
DASGSRI.VSVGKPSLAGFLTAAELMGADPAST............V.MVGDDFRSDVLPAQRVGMTGVLVRTG
>GP|15982558|dbj|BAB69477.1/49-293
FIFDCDGVIWLGDKV..IEGVPETLDMLRGMG....KKVFFVTNNSTKSRAGYMSKFQS.LGLNVKAEEIYSSSYAAAAY
LES...INFNKKVYVIGETGILEELDLKG.IRHVGGPGDADKKVT.LK.........S..G........EFMEHDHDVGA
VVVGFDRYVNYYKIQYATLCIREN................PGCMFIATNR.......DAVTHLTDAQEWAGNGSMVGAIV
GSTKREP.IVVGKPSDFMLKNISASLGLRPDQ.............IAMVGDRLDTDIMFGKNGGLATALVLSG
>GP|3218519|emb|CAA19644.1/56-317
VISDCDGVVWLLVGW..IPNTGAAVNALKAAG....KQIKFVSNNSFRSEEDYMEKFRH.IGAKVQEDDIVHPVKTIVRY
LKK...HKPGERVYSLMSLEANETLRKHN.IEFESLFKSFRVTFIFHIILFQQVKEHLTAAS.....LVDHLAIEKPVGA
VLFDIHLDLSYVELAKAIRHLQEN................DDCQLIAGGS.......DVIMPLAENLNVAGFFDFLEHVK
RYTQREA.TFLGKPSPILGEMFGEMFEIRDCKR............CIFIGDTLVQDVQFGKACGFQSLLVLSG
>GP|1397298|gb|AAC24287.1/18-303
FVFDADGVLWTGDIP..IPGAAEWINTLLDDP...EKSVFITTNNSTKTLEQYMQVFIVIKEHRLGRENLLSPTIVLCDY
FKQNSDKFENQYIYLIGVENLKKSLEEGGGVKCFGTGPDHKDNYTDGDFIN..................EVDVKSKIPKA
VVVSFDSHFSYPKLMKAANFLADP.................LVEFLVCNED......STFPGPVPGMILPETGPWSAAIQ
NVSGRKPDIVFGKPHEQLANFLKSRVQAGKFNS..........ERTVMFGDRLDTDMMFGKNNGFTTVWMQTG
>OMNI|NTL01CJ00291/2-224
FFLDVQGTLISDHDKSLIHGAKELIDFLNAKN....LPYLIITNN..TKKLDFLEKLQQ.KGLVIKENAYIDPFSVLKHL
LR.......PCKVAAFGADEFVKSLENLG.FELD........FVN................................PSA
VLVASYDDFKFKDFATMIELARRE..................VRFIAMH........ETSIYKKDGRPYPGVGSIMAMLK
NAIDFEY.EVVGKPSIAFYKEALNLIRRQNSKID........FEDIKIISDDFRGDLLKAKELGMKTLLVLSG
>GP|15619991|gb|AAL03423.1/47-277
FLFDLWGVIIEGGCT..YPGVVQNINKIIER.....KKVYFVTNAP.RNIFSLHQTIKS.WGLNAEPGMIISSGKIAVEM
ILESKERFGIEKPAIYHLGHLENDIINSIQCP..........ITDDIN........................KANIFLMT
IYRDENENLDLNEFNELFKIVVQR.................KMVNICAN........PDLGINQHGVYRYCSGYYAEKIK
QLGGKVI..YSGKPYEEIYSKILKECHNTPKNR............MLMIGDTVYTDILAANRLGIDSALVLTG
>OMNI|NTL01SM00795/18-246
VLCDVWGVLHNGIQA..FASACEALAEARAQG....LTVVLITNSP.RPHPGVTVQIRGLGVPDEAYDRIVTSGDVTQAL
IA.....AADNRIFFIGADRDLPLLEGLG..............TEIVS......................ADEAETIVCA
GFYDDETETPEHYRATLTGLAKRK..................IPFICAN........PDLVVERGHRLIPCAGAIAKLYE
ELGGEAR..IAGKPYIAIYRAALAEAKAARGAFDLS........RVIAIGDGMPTDVKGAQDAGFDLLYISAG
>OMNI|NTL03PA03886/34-260
FLLDLWGVVMDGTEA..FPGALAWLARRHAEG....RPVWFLSNSS.SSVAEMSAGLERLGIRRDWFAGITTSGQLTIDA
LLQT.AEYRRGGIYLAGVGLAQQSWPAEIRER..........FVEDIA.............................QAA
LIVGVGSFPQDELEQRFAPLRGAT.................DLPFLCAN........PDRVVVSGGRTVYGAGMLAELFS
EEGGQVS..WYGKPDPAAFRIAQRQLEARGARH............ILFVGDSLVTDVPGALAARIDTLWLGAT