HMM Seed Alignment: TIGR01473
Download Alignment>SP|P08301|COXX_PARDE/9-292
GDYVALLKPRVMSLVVFTAFVGLWIAPQP--------VNPFVAFCAVLFIALGGGASGALNMWYDADIDAVMRRTAGRPV
PSGRVTSQEPLAVGIALSGLSVMMLGAG-GNWFAAGFLAFTIFFYAVVYTIWLKRSTPQNIVIGGAAGAFPPMIGWALPT
GGIGIESLLMFALIFFWTPPHFWALALFMKDDYSKAGVPMLTVTHGRKVTRCHIFAY----TLVLAP---FALWLGFTSV
GGPLYLAVSVVLNALFIAGGWQILRRSE---------DQAQADGYRV-----EKRYFRLSLYYTFLHFLALLVQ-
>SP|Q9ZDI2|COXX_RICPR/21-299
KDYILLMKPRVMSLVIFTGFVGMWLAPDS--------IHPLIAGIAVICIALGAGSAGAMNMWYDRDIDILMKRTQNRPI
VRGVIEPDEALSFGLITGFFAVFFMALC-VNILASFLLLFTIFYYICIYTIWLKRRSIQNIVIGGVSGALPPVIGHAAVS
NTISLESIILFLIIFIWTPPHSWAIALFCNDDYKHCKIPMMPVVKGTLYTKKQILIY----SIILFIVSLMPFFIGMNN-
D--IYLIIVCIIGLVFLYYAFSLFYDTP---------DNKQ-----------AKRFFTYSIFYLCFIFILLSSTS
>OMNI|NTL03PA00114/15-296
-DFLELTKPKVVVLMLITSLIGMLLATKAPLD-G--FVPWQVLIFGNLGIGLCAGAAAAVNHVVDRRIDSIMARTHKRPL
AEGRVSPSMALGFALLLALAGMAVLLAF-TNPLTAWLTLASLLGYAALYTGFLKRATPQNIVIGGLAGAAPPLLGWVAIT
GHLSAEPLLLVLIIFAWTPPHFWALCIHRKDEYAKADIPMLPVTHGERYTKLHILLY----TLVLFAVSLMPFVIHMSG-
--LVYLLCALALGARFLDWAWALYCDSR---------PHA------------AIKTFKYSIVYLFLLFMALLVDH
>OMNI|NTL01SS01603/19-299
KSYYQLTKPRIIPLLLITTAASMWIASEGR-------VDLPKLLITLLGGTLAAASAQTLNCIYDQDIDYEMLRTRARPI
PAGKVQPRHALIFALALGVLSFALLATF-VNVLSGCLALSGIVFYMLVYTHWLKRHTAQNIVIGGAAGSIPPLVGWAAVT
GDLSWTPWVLFALIFLWTPPHFWALALMIKDDYAQVNVPMLPVIAGEEKTVSQIWYY---SLLVVPFSLLLVYPLHQLG-
--ILYLAIAIILGGQFLVKAWQLKQAP---------GDRDL-----------ARGLFKFSIFYLMLLCLAMVIDS
>OMNI|DR2618/19-309
RDYLALTKPKVISLLLWTTVTAMFMAARGWPG-DTFWSGLWLLIVVSVAGYMSAGSAGVFNMIIDRDIDLKMTRTAGRPT
SSGLISSRNAAIFGTTLQVLSFVMLWVW-GTPLAAWMSLAGFVFYVVIYTQWLKRTTWHNIVIGGAAGCFPPLVGWAAVT
GDLNLFAGYLFAIIFFWTPVHFWALALMIKEEYREVGIPMLPVVHGDHMTVAQIGLY---AIYTVVLSLMPVY-FGAVS-
--WIYFVSGALLGAWLLWLSYKLYRHVASGQP----AERKV-----------AVPLYLYSMLYLALLFLAGAIDR
>GP|466878|gb|AAA17123.1/13-292
LAYLALTKPRVIELLLVTAIPAMLLADRGS-------ANPLLILNTLLGGISAAAGANTFNCVADADIDKLMKRTSRRPL
ARAAVPPRNALVLGLALTAGSFFWLWWT-TNLLSGLLALATVAFYVFVYTLLLKRRTSQNVVWGGAAGCMPVMIGWSAIT
DTIGWPALAMFAIIFFWTPPHTWALAMRYKDDYKVASVPMLPAVATERHVTKQILIY---TWLTALSTLVLAL-A--TG-
--WLYMAVAVVAGAWFLTMAHQLY---VGVCA----GEPVK-----------PLRLFLQSNNYLAVVFCALAVDS
>OMNI|NTL01HS00516/157-439
RAYVQLMKPRLMWLLCLVAGAGMALASSQLGA-G-QQLSAATVVLTLGGGVLSIGASGTFNHVLEREQDEKMARTDDRPV
VTDRIPPRNALAFGVVLGVASLAAFAA--VNLLTAVLGLTAIAFYSIVYTLVLKPNTRQSTVIGGAAGALPALIGWVAVT
GAVGVGGVVLAGVIFLWTPAHFYNLALAYKDDYERGGFPLMPVVEGEAKTRRHIVYY---IGATLASAVVLAELTG-LG-
--PLYAATTVLLGAVFLYFAIRLHRER----------DRRA-----------AMRSFHASNAYLGCLLVAVVLDT
>SP|O66544|COXX_AQUAE/13-290
KEYLVLTKPGIVSLVLITTLGGMYLGSRGELQ-------PELVFWTLLGTGLAAAGSAVLNMVIDKDIDKLMVRTSERPL
PKGTVDPTKAFIFGITLQVFSLVIMLTF-VGVLPALLVALASFSYVILYSLLLKRKSPVATEIGGISGALPPVIGYVAAS
GSVDINAIALFLLMFMWQPPHFWVLALKYADDYKRAGIPTLPVARGVFITKLKTLLY----TASLFPVSLIPYLTG---L
VENLYFVVAVVMNLIYLGLTLKFFFSK----------KEE------------SMKLFFFSIIYLAVLFGTMIVDM
>GP|6015819|emb|CAB57646.1/9-284
KAYLKLGKLGVVSLLDLAAIAGAFLAYKHG-------ISLLPIIPMLIGGTLASMGAMIINSGIEINRDKVMSRTSNRPT
VVGYVSRKEVIVVGSLLAVLG-TALGFI-DNALTAFFIALGVIIYVFVYTILLKPRTWLNIVIGGFAGSAAAWAGYTSLT
NSLTLEAFLLGFLIFMWTPGHFWSLALKYREDYINAHYPMLPAVVGITTSARAIATS----NALMIPIVLLMGYYISL--
---IALIVFSVLSALLLFLSYRLILNPT---------KEE------------AMKSFIFSNIYLMLILLSIIIIK
>GP|5360665|dbj|BAA82098.1/6-284
KVLASVFKLRIGVFCALAAIAGALVTPGAVP-------PAPQIFAVALAVLLSAAAAGAFNHYWERDIDPMMNRTRNRPF
ATGQYAAGPLWPLGLLALTVAAVALAAFAANAWAALHVFLGAFVYGIVYTVWLKRRTAWNIVIGGLSGSFAVLAGAAAAL
PGLSPQSLILALVLFLWTPPHFWSLATALKDDYAAAGIPMLPVVRSESETNRIILAN----TFALVASSLLPAFFGAGP-
---LYLGAAALGGGWFLYKSVALVRTPG---------RSA------------AMGNFFASLIQLMLLLTAVMVEP
>OMNI|NTL01TV1140/6-286
RLYFGYTKPKVWSLLVFVGVIGAIVAINRFTL-----TNILLILIATVSITLGSMGAEATTNYIDRDIDAIMDRTKKRPL
VTGQIKPVKGLYFGLILMFLSIIILLFF-SKYLAAVFMAIGLFDNVFIYSYLTKRRTPWNIILGGFSGGFPVVIGWYTVT
NAFSVLPWFLFALVVIWIPIHVWSLAYRYRDDYNRARVPMMTSIQSDRISAICISSS----AVILFIFSIIPVFFKAMP-
--YTYMIVATIIAIPMLVYSVLFVRKPD---------RKS------------SLKLFIYSSPYLAIIFVLVLIFK
>OMNI|AF2036/5-279
KALIEVTKPKQTFLLMITFLVSYIVARGGAD------FN---FVIAAISMFLAISGTTAINMWLDRDIDAIMPRTRKRPV
PAGILKPSECAAFGAAIFAIGQVLAFL--VSLEFGLVVFFGLFFDIVVYTILLKRKSPYSIVLGGFAGAMPALGGWVAVQ
G-FTLPGFIIAAIVLLWIPSHIWYISMHYEEDYRMANIPMYPLVVGMERASWAIVFA----TAAMLVLAASLYVLLPLG-
--IFYLVISTSAVAFFLYKAVKFALSPD---------RVK------------ARKMYKLASMTLGLVYFSLLLGV
>OMNI|NTL01AP01939/20-296
KAFISLTKPRQLALLMLTMYGAYFAGGGSLD------PRM--LALLTIMGFTSIGGVTAFNMYFDRDIDAIMGRTRRRPL
PSGVLNPYEALAGSLALVIAGVLSAAA--INTYVALTVIAGLYFDIIAYTQLTKRFTPLSIIFGSIAGSMPALGGWAAAA
GSITTGGVLMALIVFLWQPMHVWFLGYYFKEEYSVARIPILPSNGNPRLVSSLIAVS----LAGLIAVAWAFALYYGYG-
--FLTAVITTVLAALAISRIGGFARTGE---------RRE------------ALKLFKFASPIIAVVFIILPLER
>SP|P24009|COXX_BACSU/23-303
KDFLSLIKIGIVNSNLITTFTGMWLALHISG--LSFLGNINTVLLTLIGSSLIIAGSCAINNWYDRDIDHLMERTKVRPT
VTGKIQPSQALWSGILLVALGLIMLLM--TTVMAAVIGFIGVFTYVVLYTMWTKRRYTINTVVGSVSGAVPPLIGWTAVE
GNIGVVAWVLFMILFIWQIPHFLALAIKKTEDYRAANIPMLPVVYGFEVTKRQIIVW----VACLMPLPFFLGS------
LGLPIVILGLLLNIGWLILGLMGFRSK----------NIMKW----------ATQMFVYSLNYMTIYFVAMVVLT
>GP|14246886|dbj|BAB57278.1/18-299
KELQQIIKMGLVQGNLIPAFAGAWLAVVMTN--HSFLSSIPQILLMLFGSTLIMGGACALNNYYDQDIDRIMPSKQNRPT
VNNRITDQNLLLLSFGMMLVGEICLFL--LNIPSGVLGLMGIVGYVSYYSIWSKRHTTWNTVIGSFPGAVPPLIGWVAIE
GQISLTAIALFLVVFCWQPIHFYALAIKRKDEYALANIPMLPSVKGFKRTRVSMFIW----LIILLPVPLLLIN------
LGVVFVVLATLLNLGWIALGLTTFKKNS---------DQTKW----------ATQMFIYSLNYLVIFFVLAVIVS
>SP|O31652|CTAO_BACSU/34-322
YDFIKLAKPGIIISNSIATFAGFWIAFASAEKTLTGLAFLMTMVTAMLGTAFVMASGTVYNNYFDRHMDAKMARTRSRAS
VTGKMPPAMILTYGSVLGIAGLAMLYS--LNPLTAFLGLAAFIFYAIIYTVWVKRTSVWSTFVGSFPGAAPPLMGYCAVT
GDFSMTAVLLYTIMFLWQPPHFWAIGIRRKEEYRAAGVPLLPVVKGNHVTKIKMMQY----IAVLVPVTLLFPFSLGTGH
ISPFYFLAALVLGGIWIKKSIKGFKTD----------DDVKW----------AKDMFVYSLIYFCLLFFIMMIDS
>SP|Q9WWR5|CYOE_PSEPU/4-283
KHFIQITKPGIIFGNVLSVAGGFFLASKG-------HVDFALFLAVVIGTSLVVASGCVFNNCIDRDIDHKMERTKNRVM
VQGGMSLPLALIYATLLGVAGFSLLYVQ-ANPLSAFCALIGFIVYVGFYSLWLKRKSVHGTLVGSLSGAMPPVIGYCAVS
NSFDLAAVTLLVMFSLWQMPHSFAIAIFRFKDYSAANIPVLPVARGILAAKKQIVLY----VLAFVLATLMLTL---GGY
AGLGYLAVAAAMGLYWLYMAWGGYKAE----------DDSKW----------ARKVFGFSILTVTALSVMMGVDS
>OMNI|NTL01BA00445/3-283
KNYIEITKPGIIIGNSTLITGGFLFASR------HAAFNYVLFIYTILGASLVIASACVFNNLIDIDIDKKMKRTSNRVL
SKKLLPVFSVFNFAIFLGVLGLSILGCL-VNFISMSLAVFGFFIYVVLYTMFYKRRSFYSTFIGSFSGSTPSVIGYTAVS
NTIDICSILLFVIVIFWQMSHFYSISIMRIKDYREAKIPVFSVVKGVAITKKHIFFY----VLNFSFFSSLFTF---LGY
LSYNFLLLSSIVNFYWSFLSYSNIKKN----------NDKKN----------ARKLFYFSIIVIVFFNFLISIDV
>GP|495493|gb|AAA21148.1/155-430
GILAQLSKIKLTALVVSTTAAGFALAPGPFD--------WPCFLLTSVGTGLASCAANSINQFFEVPFDSNMNRTKNRPL
VRGQISPLLAVSFATCCAVPGVAILTLG-VNPLTGALGLFNIFLYTCCYT-PLKRISIANTWVGAVVGAIPPVMGWTATT
GSLDAGAFLLGGILYSWQFPHFNALSWGLREDYSRDGYCMMSVTHP--GLCRRVALR---HCLALLVLSAAAPVLDITT-
--WTFPIMALPINAYISHLGFRFYVDAD---------RRS------------SRRLFFCSLWHLPLLLLLMLTCK
>SP|P21592|COXX_YEAST/147-443
MPYLQLTKPRLTILVMLSAICSYALSPYPAS------VNE--LLCLTVGTTLCSGSANAINMGREPEFDRQMVRTQARPV
VRGDVTPTQAFEFAALIGTLGVSILYFG-VNPTVAILGASNIALYGWAYT-SMKRKHIINTWLGALVGMVPPLMGWAAAS
PLSHPGSWCLAGLLFAWQFPHFNTLSHNIRNEYKNAGYVMTAWKNP--LLNARVSLR---YSILMFPLCFGLSYFNITD-
--WYYQIDSGLINAWLTFWAFKFYWQQRINYSAKTLKDNVKFNKGLSVANIYARKTFMASVLHLPAILILAIIHK
>GP|6598392|gb|AAC27454.2/96-378
RCYWELSKAKLSMLVVATSGTGYILGTGNAA------ISFPGLCYTCAGTMMIAASANSLNQIFEISNDSKMKRTMLRPL
PSGRISVPHAVAWATIAGASGACLLASK-TNMLAAGLASANLVLYAFVYT-PLKQLHPINTWVGAVVGAIPPLLGWAAAS
GQISYNSMILPAALYFWQIPHFMALAHLCRNDYAAGGYKMLSLFDPSGKRIAAVALRNCFYMIPLGFIAYDCESWGLTS-
--SWFCLESTLLTLAIAATAFSFYRDRT---------MHK------------ARKMFHASLLFLPVFMSGLLLHR
>GP|6066441|emb|CAB58383.1/237-512
IMVSQMGKSQLSAYVAATALAGYVIAGGTVP-------LV--AAAVTAGTMLQSCSANTANQIIEAPYDKLMKRTCRRPL
PMKFLSPQAATAISSMELTLGTGLLYC--VSPPAAALGVFNWFLYVCIYT-PLKRVSALNTWFGSIVGGVPPLMGGVAVA
GIITPPVWLLATFLFVWQIPHFNGLAFHCRRDYEAAGYKMLAFYNPWRASFYAVALS--VLMAFLTLVCPTLAGMEVEG-
--MWYYSVTAAANALMIYKSLLFHNEP----------VRH------------CRGCFVFSYVYLSVVLAAIMLNH