HMM Seed Alignment: TIGR01631
Download Alignment>GP|18700051|gb|AAL14352.1/46-805
AAQPPQIRQRTEG..GPNWTMDSKVRDVLLDD.YAGLRNLTLHDFLLKKFLNTYN...TENVAMDVFVQSPGDYILDAGI
LERIQRLYQFEEYKELYDQFSEMKRKARYLDEKEIYYLSQWEEKGTVEIREFVGPVARGR......LDGAVTAAKRAEKR
AAQTAD.GSELKGVYDSIYNATWSYVESGHDTEPLGMKVFNGR..PPHMWTKEEVDVSHTPETMNEPLP.RHGNLEIAVL
TSQMGWPYTSFEKNPNDYDINHEKGVEYVFKSDVYIRREALRVWYKVENVLNRWLMDEVI....VDDASNVLIGTPGIGK
SFSVGSLLLYKLLHYEASQLQIIIYVVRGKAYVFHKPIGGRAGYVTFYNDYGNAFTVVEQIIGGSRSGEDIKGYVIFDVD
KD..HPAPTKPPAGCAGIALSSPNVKQFHEWSKQN.TASDIYMNCDTLKDLEAIHISRWGKIAPA....YKWSPPVAKEK
IESEWQEIQARIRIVGPLLRHIG.RLSSYNRQEGKVQEAIGKMKDDDMNDYAKYFQNAAMWQTDEVSHKLVGVVRVKEEK
LLCEMYRCRPLSSYTGQAILDFLIPWLTDKYAAMSALLSNRAIAAYMFEKSGIEALSHENTLTELARELQGLS....FAR
NQIPQS.VLQVLQEPRLIGPSIVVPEDVPIVAGAEIQYMKLYKPQSRSFPVVDAFFFVESP..............KTFVG
LQYTVSGRHPCSTGGLFKMKRYLRSYFQG.....WDNFSNDMVWEIIYVQRVDSEKITKPQCCERTDR..DEGQNNEVEE
RFWKREVRQFAVSL
>RHS4e.tot/39-799
AAQPPQIRQRTEG..GPNWTMDSKVRDVLLED.YAGLRDMTVNDFIQKFVGGTFAVAEAENVRMPIFVQSPEDYILDARL
LGRVRGTDEFKTVK....TAIDLSEKVDYLDEKEISTLSQWEEKGKGEIREFVGPVARGR......LDAAVIAAKRAEKR
AAQASDGAVYLEGVYDSIYNAKWSYVMSGYDEEPLGMKVFDGR..PPHMWTEEEVDINPLPANLDARVPERPYGLEIFVL
TSEKGWPYNRFALDDAEICWENFK........HVYIRREIMRVWYIIQRGLQGRWVEK.A....DITPRHIVIGTPGIGK
SYGVGSFLLHSLLHFHEGMFDVVAYFTDGIAYLIYNKKPGEEGRVEEYEDVKAAVRVIAALVF.....KKKKGHIIVDIC
KNAQTPPDGLPVHAWGVTLLTSPDEAHFHHWSKDK.RDVGIIINCDDVRDMKAFVAWTKLSVASGYAALDEEAQARIVEE
LENEWETIKSRINVVGPVPRCVY.NSAGYTKRVSQAKKMITSINGDNKSHYEDIMGKIADWRNDKVTHRLVKIVRVRDAG
ESVDEYRCRPLSVCIGNAIFFKLLAIDVEKMAICQVTMSDESAAANVFESRALLSLLFPRVFKVIAENLKYLQ....RPG
GLEEKRCILNDMAPQQLRLIGQKALPATHQQPIDNCEYMVLYRPATGNEPVVDGFFFVEGRFRRNRDGAAPPTTPNIAVL
LQVTKSERHPTTTDKVKKFRENMARYFSD.....WGAFSRNMVWEMIYINSVNGGVITRWQLCDGDN...PAEAAD....
.MWRN.MAQYQVTL
>GP|18700053|gb|AAL14353.1/45-796
ARRFLKRLRGDEE..GPTWTMNSSIEDVLLQR.FAGLRDMKLHDLLNHHFGETLG...TSNVSVGVFVQSPEDYIVNAKF
LGRIQRLDEFQ........L...LRAVIYLPRNRIEDIHQWEENATAQIREFVGPVAATK......LDSALRIAKEARKR
AHQTAD.GVELKGVYESIYNATWGYVESGHNDLPLGMKVVGNSDGEPELWTEEEVNVSHTPYDLCDPLP.RHGNLEIAVL
TSQEGWPYNSFSTPEHAIQEEAEEPGDYVFDGDVYIRREVMRVWYLVKHRLDLWLGPGVN....KKQIPCVLVGTPGIGK
SFGVGSFLLQRLLHYDSELLRNIAYFVKGRAYIFFRATNDHPGKVVFYEKEKDGLDAVEAFVV.....EKVLGYIIYDFW
KDRHQPIPADLPGAWPVIVLTSPDPNNYKDWKEPR.GCEFLCINCYEEVELKAAVAWRRLSKLEE....SKIT.EAHIIN
LENEWQKTLGWIKKVGPLARQVLEGEKRYKGRVREINEALAEISRGDDSHYMKVLNSRVQWRQDGTTYMLAKLVRVVTE.
.NGEECRNRAVSIDIEQKLRVWANTACMRDNYLRKVFRGKEERAADEFENVGVYAFTMGNVVQTIVTHLRYLP....RVG
EEMDSN.VSVLASGNAVGRVPTSLRQFNPETTGQDIEVGCFYRPVQGNFPVVDAFFFVTEPAVDREGR...AIITTTIVL
LQATVAPTHHTTREKVDKFIKAMKQLFGE.....WDKLARNLKWELIYIQYSDSKPIEERQKCEPVG.....GRGDHTTE
LWNK..INQFQVKM
>GP|18700061|gb|AAL14357.1/27-798
DAEPPAVQQRVENNNQPQWRLFSRVDAVLLDG.LPHPRNMMLNDFLRRNFGRRYNVNEENNVSMFVFVLEPEEYINDVNA
LNRIFATTEYKVYKR....FVSVYGFFEDEGILNLQRWQQADEVVKARLQVNIRGLRDGERLWIVVTNMLNDALNEALQG
AILAAGGAVNLEGVYDSIYNAKWSHIIIDNGTQPLGMRLVDGMPNEGLMWKEEEVDVVPEIEEALEQKPERTKGVELLVL
TSEMGWPYTGFARGSN...............SDIFIRREELRVWNVVRNGIELWRTQRALPGCLHFPRAYLAIGNPGIGK
SQNLGSFILYNLLHYDAEELPVVAYFRGVAAYIFEKSGGGGVCRVKKYSKG.AAMDLLEVISS.....N.TRGYVIYDFV
KKG.EQPPADVAPKWGSILISSPNLRNFDSWFQQRERCARIVVNCWEMTEMRAFFSRIGPMLYPE..........ATPVG
LREKWEMYESRVEFVGPSLRYVFDGAKHATREDDIDNEINSIKSHERRELYIGVVGNKGGWRESDASHKLVKIVRACGRN
.NGEIYICVPHSESIKKRIIQKICEITAQNLARLAGLIPTREMIPALFEYNAIKALGFPKVLSMITQMTKPLPERGVREQ
EIAQNISVLRHVEEKYLNFGNAADFTDGYGMVIRSPSLFQAYKALP.NFPVLDAFFVVDPDAIAEDKK.QQRREKKTIVM
LQYTTAESHDTKTGTVLGMLKKLLNPTTNPSDEYWKEVMGQYQWEMIYVQHPDATPMRVKQRCDFTDG.KADDENHRHVE
MFWKNDVKQYLVKF
>TcRHS.GAMAD43.tot/37-769
TDQLAATRRRMEEARQPQWTLDSRVEDVLLEAT.ARSTNMKLGDFLWQNFGGRGVVDTNRNVLLKEFLKEPARYIRDAGV
LNEIHASSHYERVRNDLGNKVVFDEDVRKLEENGVNTLIDWLEAAAG.VKAVVHGITRVS......LDPFLEDVRNSMR.
.MSTSN...ILEGFYESVYNARWSHLVEVPGGEGTGMEVKEGK..PPQQWTYKKVGYCLERDDGAQQSG..AARLRLMVL
TSDKAWPCMWNRKGVES.TR............DCYVNCEVERVWQIVKGDLTEWSSSHGKAD..FMPERRVLVGTPGIGK
SMAAGSYLLYQLLHCDVEKLQMVAYFIADRTFLFDKTS..R..TVSTYMSDSSNASFVRSLSD.....RGVKGYIIHDLA
EPDDAPSFDLPPRGWGMVLVSPPFESNYKEWVKRS.NATKMVMDCPGESDVKAMCVWMGRHQPVR..............E
QAEDWRVVKSQMDEVGPIPRYIF.DERKYNNWVQRCHKTVDEATSSVIAHYTDLGRG.VSWDCKKVLYWLAKAVRIRGGD
CSCEFFSNVPVSAHLGNKTLFKSAKLMQQRDFNSLISELTDYLISENFGRCTVFAFLNGSFVRGIERRPRELR.....PS
PQRRSHRCALAVYSQEGSTRHHVLPPLEHFSERIDVECGVLYVTEVENFPLVDAFFFVKSN.............PMTLVG
LRMAAAGAHHTTTSTVRHFTEYLAAYFNG.....WEELSRQLSWEIIYVQHADSTPMNDWQRCDVVDSNNVSGADNNEIA
AFWNEKVRQYQVSI