HMM Seed Alignment: TIGR01760

Download Alignment

>GP|4063799|dbj|BAA36253.1/198-544
GMYTGDKLRQMLGVGYEFDATMSATQAVTRIERK....DDPQMQALRQQARTLPLSS..KFTDK..EVAQGQYFLGRTGY
N.........AKQILGAMPGMLNLAAAGDMDLGDTADIASN.IQTAMGIPAEKM.......DQVADVLTAAFTRNNVDIR
MLGDSLKYSAGVGREYGQSLETVTTATALLGN.AGVQGSMAGTSMRSVLTRLG........TSKAVAKLG......VQTK
DANGNMRDMLDILKDINKKTAG..MGNVQRGAIFKDIAGQYAVTSFGTLMRAVEGGQFQTMRESLNNSEG.EAARVAATQ
LDNLKGDMTMLHAALENISVELFDKN.SPWLRELAADLSHLLHNIGEFLKANPQVSKGIVITVAAFSALMA
>GP|4126622|dbj|BAA36642.1/161-506
FGALALSLRDAVQVGIDFEKQMSKVQAISGGS.......AAEIAKLREQAKELGATT..VFTAS..QAADAQGFLAMAGF
K.........VNDIYDAMPGMLSLAAAGQLELGMAADITSN.IMSAFALKAKES.......GHASDVIAYAAANANTNVE
QMGEAMKFLAPNANSLGWGMEESPAAIMAFGD.AGLQGSIAGQAFGTSLIRLASP...TGKASKLVKKLG......FNFF
DAAGNMKSMPEVVEEMEKGLKG..MTKEQQAAALKTIVGAEAYKHWAVLLQKGSK.ALGDNTKALEKSDG.AAKKMADTM
LDNAHGSIVAFQSALEGAKIKLTESL.LPALGDLANKGSDLIMMFNNLDSGTVQTIAKTAVLATGVLGV..
>gi|23473492|gb/55-400
AGVVLGAFAPAIGVAAEFEAAISGLGAISRAS.......ASDMQLMQRSALDLGAST..AFSAA..QVVEAQTELAKKGF
T.........ANKIVGAMPGLLDLAAAAQTDLATAATVTSG.ALNSFQMDAAKA.......GKVADIIAAASTTSATDVE
GLGMALQNAGAIVASSGEDFALLAAITGKLAD.ANINAAVAGTATKIMFTRLAAP...TGEAATALQKLG......INTR
DAQGNMLPFLSVMGNLESALAG..MGTGEKAEYLKKIFGEEAVGSVTALLSKGVT.SLGNYADSLRSSAG.AAAEMASRQ
LDNLKGSITILGSGWEGLSISIGSVF.TPALTIAVRAVTTLVGWLNRLASHPVGKAVLAVAGGLAAVIV..
>GP|3139112|gb|AAD03293.1/198-550
AAAGTMAGVKLLMPGYEFAQKNSELQAVIGVA.K....DSAEMAALRKQARQLGDNT..AASAD..DAAGAQIIIAKAGG
D.........VDAIQAATPVTLNMALANRRTMEENAALLMG.MKSAFQLSNDKV.......AHIGDVLSMTMNKTAADFD
GMSDALTYAAPVAKNAGVSIEETAAMVGALHD.AKITGSMAGTGSRAVLSRLQAP...TGKAWDALKELG......VKTS
DSKGNTRPIFTILKEMQASFEKNRLGTAQQAEYMKTIFGEEASSAAAVLMTAASTGKLDKLTAAFKASDG.KTAELVNIM
QDNLGGDFKAFQSAYEAVGTDLFDQQ.EGALRKLTQTATKYVLKLDGWIQKNKSLASTIGIIAGGALALTG
>OMNI|NT01MC4213/247-588
IRAASNFIKDSILTYAAFDDTMRQVAATSGAT.......SEELTQLTELAKEMGAST..RFSAT..QAAGGLKAMSLAGL
S.........ASQQLQALPKVLELAAAGSVDLETAAGIATA.SMAQFGLQARDLG......N.VNDILVTAFTNSATNIQ
DLGLALQYAGPVAKAAGNSFEETATVLALLAK.NGFSGEKAGTALRSAYARLLAP...VDKAQEAINRMG......LQTR
DATGQLLPMTQVLRNLRASGAD........AADMIQIFGVEAAPALTAAVGMSSQ.AFEALVSKFEQVGG.VAGRVATEM
EAGMGGSIRSLESAWEGVKIAVGEAI.DKHSSLNFQELTAAINENKDAIVELALAGVDLAAMLGRVALMVG
>OMNI|NTL03SA1390/322-669
STPITLGLGAALKTSADFEGQMSRVGAIAQAS.......SKDLKSMSNQAVDLGAKT..SKSAN..EVAKGMEELAALGF
N.........AKQTMEAMPGVISAAEASGAEMATTATVMAS.AINSFGLKASDA.......NHVADLLARSANDSAADIQ
YMGDALKYAGTPAKALGVSIEDTSAAIEVLSN.SGLEGSQAGTALRASFIRLANP...SKSTAKEMKKLG......IHLS
DAKGEFVGMGELIRQFQDNMKG..MTREQKLATVATIVGTEAASGFLALIEAGPD.KINSYSKSLKNSNG.ESKKAADLM
KDNLKGALEQLGGAFESLAIEVGKDL.TPMIRAGAEGLTKLVDGFTHLPGWVRKASVGLAIFGASIGPAVL
>OMNI|NTL01LI2367/89-446
TAPIVAGMVKSTKAYLDFDNEVTEVNSLLRESGE....SAKEFGDRYTQVFDYAQKASVKYGVASEQTMLGMKEMVKKGY
D.........INQTMASMPAIFNAARASGDDFETVMSVTTS.TLEQFGMISKDTNKQMEYTNKVADVLTYVADKTAAGFS
DMGTAMNYVGPISHSLGYSLTDTAAAVGLLSN.RGIEGQKAGTGLRGMLTSLLKP...SKSAAEAMSAVG......LTIE
DNNGNMKTLPTLLDDINDKTKK..MTKTQKNSFLTMIFGREPLSAVNTLLEAGGD.SLRKYSKGADEANG.YTKQVADNM
RKAGKFGVDQFKASLEVLEQNVGQKL.MPALTPIIEWANKMIDKFNDLSGEQQQNIIKWAGIIAATG....
>GP|19908307|gb|AAL96783.1/205-546
SVAMIGLGSAATFANIKFEDSLANINTLLDDQ........SHLESYKNKIRELSDET..GMSLET.VSEGMYTAISSIGD
G.........GKETEKIFETMAKSAKAGGAEVQDAVSLISAGMKGYNQVNDETA.......KKISDLAFQTAKLGVTTFP
EMAKSMQQLFPLANNLELSLEELFTDMATLTG.VTGNTAEVSTQLKAVFSNLIKP...TTDMQKLMQKYG......FQNG
QAMLKSEGLIGTLKILQKETGG.......QSDKMGKLFSSTEGLTALTALTGSQFDTLVDKSKKMKESIG.TTDSALTKI
NSTLGNDLRTSLNLVRNSFVDFGEIL.APFISIGANTLSTIITMINGLSEGQKKLVVGFGASFIGINL...
>gi|23102827|gb/254-613
GYALSRPLSAVMDAYAPAEDAAAQLRASMMGADG...SVSADFEKISALATRLGDRL..PGTTAQ..FQEMMTMLRRQGI
S........AQSILGGTGEAAAYLAVQLKMGSSEAAEFAAK.MQDSTRTTEADM.......MGLMDTIQRTFYLGVDPTN
MLQGFAS.ISPALSMIRKSGLEAANTLAPLLV.MMDQAGMSGESAGNALRNVFQSGFKTDKVAKANKMLKK.LGISLDFT
DGKGEFGGLEKLFAQLQKLQKLT...TEKRTAVISEIFGDD.SQNLQVLNTLIDKGLDGYREVEAKMKAQADLRKRVDDQ
LKTLTNVIDAAQGSWTNAMAEFGAAV.APELKGLIQWLGNVASGIGAWARENPQLAGTLVKVTAGIGALAA
>gi|24113354|ref/46-401
GTAVLGALALPVKSAIALESKMADVRKVVDGLDT.....PEAFKAMTEQVRDLSTEL..PMSAEG..IAEIVAAGGQAGI
A.........RDELMQFTDDAVKMGVAFDTTAEESGQMMAQ.WRTAFKLTQGEV.......AGLADKINYLGNTGPASAK
KISDVVTRIGPLGSVAGVASGEIAAMGATIAG.MGVESEIAATGIKNFMLSLTARDSATKSQKKVLRSLR.ISPKKLAAD
MQKDARGAMLHVLDSLAKVPKE......KQAAVLKALFGKESLGAIAPLLTNLDLLRTNFNRVADAQQYGGSMQKEYAAR
AATTENQLLLLQNQINAISSTLGETF.LPSLNEGIKEMKPFLEEVRTFVRENPEVVKTIAKTGAALLTMGV
>GP|16517105|gb|AAL24514.1/98-453
TIGLGLTFAAPVKVAIDFESAMADVTKVVDFKKG.....TDEATKFAKKLKEMSRTI..PLSAA..ELAQIAASGGQLGI
K.........KEDLFMFTETVAKMSTASDMSAEQAGDSVAK.LSNVYGIDVSKM.......EYVGNVINHLSDNTAAKAK
DMVEALAIVGGTAKQFGLDIKETSSLVNAFVS.LGKQPAKAATAINALLSKLQTAEEQGGDFKAALEQMG.ITAEEIVQR
ISENGEEALLYFFQALKKMDNQ......ERSTILMKLLGQEYQDDIALLAGSFNKYEDAIRLLSDTEKYKSSLQKEFQNR
VDTTASKLRLLRNAIAEVGMNLGSVM.LPTLKSIAEFLQEKTRSIALFAEKYPTLTKAIMGTVAALISLKV
>OMNI|NTL01ST2620/199-567
GVAMGAPVVAAVKSYASMEDAMKGVAKQVNGLRDDNGNRTKQFYDMQDAIKAASEQL..PMENGAIDYAALVEGGARMGV
TNQDDPYEEQKRDLLAFASTAAKAATAFELPADELAEGLGK.IAQLYKVPTRNI.......EQLGDALNYLDDNAMSKGG
DIINVLQRMGGVADRLDF..RKAAALGSTFLS.LGAAPEIAASASNAMVRELSIATMQSKRFFEGMNLLQ.LNPAEIEKQ
MTTDAMGTIQRVLEKVNNLPQD......KRLSAMTMIFGKEFGDDAAKLANNLPELQRQLKLTSGSGANG.SMQKESDIN
KDSLSAQWLLVKTGAQNAFSSLGETL.RQPLMDIMGMVKRVTGALRRWVEQNPVLAGTLMKVAAATAAITV
>OMNI|NTL04SP0722/157-522
SAGFGAGALLSIKAASDFDTAFTGVKKTVDEVRDANGRVTYSYERLSNGIRKMAKEI..PASTT..EIAGVAEAAGQLGI
K.........TKDVLGFTRVMIDMGQSTNLSAEEAASSIAK.IANITGLTSKEY.......SRFGSSVVALGNNFSTTER
DVIAMTNRIAASGKLAGLTNQEMLALATAMSS.VGIEAEAGGTAMTQTLSAIETAVINGGEDLTKFAQIANMSSKDFAKA
WKEKPIVALQEFIKGLGQLDKKG..ESATKVLDELGLSGVRQSNMLKSLGLASETLGKAINVSNQAWRENKALTDEASKR
YETFQSKLKIFKNKINDIAIEIGGPL.MEAASNALDALEPMFKTIGNIAKAYSNANPETKRFIAYLIAGTA
>GP|15024039|gb|AAK79094.1/316-666
IASVTGEIRNAISTNTEYEKNLVDLGRVLDSN.......KKSLQDFGQYAVRTSKEFG.QDLGG...IQSAMSSLAAQGV
S........AKKDLESMTKTVSLGLNTSEITNSNEMVQLLVSSMKQLGINFSDS.......EKVLDSWNKTADISMAKTA
DFAQVTDKAGMTSKDMGISLNQLNGITAVLADNTGKSGNEIGDALKSMENRLERP.....KTLETLRGYG......IEVM
KDKDHFKDFGDIVKEVSSALDKFG.DNTTQSNSILDALGGTMRKDWIDVLAKN.WKDVDKFAKQSANSAGYSAKKNAQAM
S.TVEKQVKVLEASVKEFFVTLGQSGGLTEIRTVVNGANDVVQALEGVNKGFGSLLLLIPQVALAIKGLNF
>OMNI|NTL01BS2133/349-692
FYGAISGLKEMVSQAIEIDTLMTNIRRVMNEP.......DYKYNELLQESIDLGDT....LSNKITDILQMTGDFGRMGF
D.........ESELSTLTKTAQVLQNVSDLTPDDTVNTLTA.AMLNFNIAANDS.......ISIADKLNEVDNNYAVTTL
DLANSIRKAGSTASTFGVELNDLIGYTTAIASTTRESGNIVGNSLKTIFARIGNN....QSSIKALEQIG......ISVK
TAGGEAKSASDLISEVAGKWDT.....LSDAQKQNTSIGVAGIYQLSRFNAMMNNFSIAQNAAKTAANSTGSAWSEQQKY
ADSLQARVNKLQNNFTEFAIAASDAFISDGLIEFTQAAGSLLNASTGVIKSVGFLPPLLAAVSTATL....