HMM Seed Alignment: TIGR01820
Download Alignment>OMNI|NTL01MM2818/40-607
PLDLYQILKKSGCSGGSGYSYLLESVEKQASKARYSFVGNSPDSLLTINDRKLSLELLNPNASDFFEEIVSKVKKVCSAG
TGEEVEEVAKEKEKENKNKNKKRGEENNAEEDNAEENTEVRKLRKFTASIPEGKDSFDALRLVFPPANGIEFLNEKRFER
QTFLGG.AIGYTAYDAVYDSWLGADKG..FES...EIPELQYLLVT.KSYVFDHLTEEVYIVVTPFINPDSDTGKIYEEA
LSEAEKLYSAIREVSLYESTGKAAFLNRLAGPQSTELQPTKLQSAELQSTASNSTGLQLEGSGSPLQVCSSDRSEFETSV
LRAKEHIFAGDIFQAVLSRKCEFRLE.QPPFELYAQLRAINPSPYMYIFEFGDLAIVGASPETLMTVH....KRTVMINP
IAGTCPRGKSEVEDEILASHMLNDEKERAEHVMLVDLGRNDVRMVCESGSVKVSGFMKVLKYSHVQHIESTVSGTLRPEC
DQFDAFRAIFPAGTLSGAPKIRAMEIISELETAPRGIYGGGVGYYSWNGDADFAIVIRTLLIQG....KKVSLQSGAGIV
ADSDPAYEFRETERKMAAMLTAIG
>OMNI|NTL02MA2906/39-553
PLELYGALRGSGTTG...YSYLLESVEKQESRARYSFVGNDPDAVLKINDRKISLELLNPKASPLFEAICTKMEEVCGPE
T..........AEKENESK.KNAGPE.........K.........FTAAIPRGKDVFDALRLAFPPANGIELLNSRRFAR
QTFLGG.AIGYTAYDAIYDSWLGVEKG..FES...DIPDLQYLLVS.KSFVLDHLTEEVYIVLTPFVSPGSDAEQVYEEA
LSEAERFYSVIKKATQPEDAAKAAEGIIASG...TDVSG........PAKAPNSN..........VQVCSVDRSGFEESV
LQAKEHIFAGDIFQVVLSRKCEFKME.QSPFELYIQLRAINPSPYMYIFEFGDLAIVGASPETLLTVH....KRTVIINP
IAGTCPRGKSEAEDETLASHMLNDEKERAEHVMLVDLGRNDVRMVSESGSVKVSGFMKVLKYSHVQHIESTVSGTLRPEC
DQFDAFRAVFPAGTLSGAPKIRAMEIISEREAVPRGIYGGGVGYYSWNGDADFAIVIRTLLIQG....RKASVQAGAGIV
ADSDPAYEFRETDRKMAAMLTAIG
>SP|P33975|TRPE_HALVO/36-512
PLAAYTTL..ADRSD...YGFLLESAEKVSSSNPQ.ARSPRPRTAADSHAR.FSFVGYDPEAVVTVGPDGVDVTDLGG..
...............PAAEFVGAGD...........................G.DVLDSLRGALPDLPRVNFPET...DA
DVT.GG.LVGFLAYEAVYDLWLDEVGRERPDT...DDPDAEFVLTT.RTLSFDHREDAVRLVCTPVVSPDDDPGEVYDGV
VAEAERVAEKLRAADDPAPGGFERTGEDAGS.....REE....................................YEAAV
RKTKEHVRDGDIYQGVISRTRKLRGQ.VDPVGLYASLREVNPSPYMFLLRHGDRRVVGASPETLVSVR....GDRVVVNP
IAGTCQRGSGPVEDRRLAGELLADAKERAEHTMLVDLGRNDVRRVSTPGSVRVEDFMSIIKYSHVQHIESTVSGTLDADA
DAFDATRATFPAGTLTGAPKVRAMEIIDDLEAEPRGVYGGGVGYYSWTGDADVAIVIRTATVDSGGADDAITVRAGAGIV
ADSDPTAEYEETEQKMGGVLDAVR
>OMNI|NTL01HS01258/32-514
PLTAYDALV.ADADD...HAFLLESAEKTPASDPDGAFTPDTTTEETRHAR.YSFVGYDPAAVVTVDPDDTTITRLRDD.
...............PITDLLDAPDH.........A..............T.G.DVLDRLRSVMPAVPRRNIPTE...DR
QLLDGG.LVGFLAYDAVYDLWLDEVGVERPPT...PLPDAEFAVTT.RTLVFDRATDSVSLVCTPVADADTAT.DVYDAL
EAEAKRVQAVLRDATAPATAGIEVTTERAGD.....RDA....................................YTDAV
ETAATAVRDGEVYQAVVSRTRELDGD.IDPRALYDALRAVNPSPYMFLLAHGDHTVVGASPETLVAVH....DDTVVTNP
IAGTCQRGASPVADRRLAGEMLADEKERAEHTMLVDLARNDVRRVSAPGTVSVPEFMRVLKYSHVQHIESTVTGTLAADA
DAFDATRAAFPAGTLSGAPKVRAMEHIDAIEATPRGIYGGGVGYFSWTGDAELAITIRSGTITHTGDEDTLTVRAGAGVV
ADSDPDAEYEETEAKMDGVLAAVD
>OMNI|NTL01PF1709/11-430
PLRLYLILR...QLE...YPFILMSAEKHSKKARFTYLSAAPEFIVSINER.....................GTYLDG..
......................................................KKVSKERNPFKGLKGFIKHSI...SG
ERFMGG.LVGYIAYDAVHNYIEGNVEE...........PSVFGYYP.WTYIYDHLENKLYFVSLEEPPFD..........
...PEAIVEKAKRAKIPREDGGSSILKTDAN.....KEE....................................FVEIV
EKGKEYIFSGDVFQVVLSREYVVETD.LDPFTIYLRLLDINPSPYTFLLEF.EKVVVGASPETMGSVE....GKIVKINP
IAGTIPRGKNEEEDKALEKALLSDEKERAEHVMLVDLARNDVRRVSKPRSVKVVRYFDVVKYSYVQHIESEIIGELAEDK
DMFDAIEATFPAGTLTGAPKIRAMEIIDELEKSRRRVYGGAVGYFSVTGYADFAIAIRMAEID.....KHAHIRAGAGIV
ADSIPEKEFYETENKMRAVLKAFG
>OMNI|NTL01PA0460/11-431
PIKLYSVIR...EFE...NPFIFTIIGKDSKEAKLTYISASPEFTVEISGK.....................GTFLDG..
......................................................KKVSNETNPFLSLKSFNMDSA...SG
SGFLGG.FMGYIAYDAVHNYIEGSIEE...........PSVFGYYP.WVFIYNHGKGELRFYYLRDPSFD..........
...PETIVERAKREELKFENGGAEIIRTDAN.....REE....................................FMEMV
EKGKEYIFAGDVFQVVLSREYVLRSD.VDPVELYRKLISINPSPYTFILEF.KKILVGASPETMGSVE....GRTVRINP
IAGTAPRGKTPEEDEEIRRRLLSDEKERAEHVMLVDLARNDVRKVSKPGSVKLVRFFDVIKYSHVQHIESEVIGELADDK
DMFDAIEASFPAGTLTGAPKIRAMEIIDELEKSRRRVYGGAIGYFSITGYADFAIAIRMAEIEG....RKAHVRAGAGIV
ADSIPEKEFYETENKMKAVLKAFG
>SP|O28669|TRPE_ARCFU/9-410
PVKLYSAIR...DEK...FPFILESAEK.SGRARYTYISFNPLYTVRVGSR......................TRVDG..
......................................................EVISKISDPFDALNEIHVK.......
....GL.LVGYVAYEAVKNYIGKKPQT...........PSVFGCYD.GYFVYDHYLRKLFSVNVEN..............
...ADKIVERAKRVEVEQVRGNSEVLRAGS......REK....................................FEKMV
ERGKEQIFEGEVYQIVLSREYVVDTD.LSPFQMYLNLRETNPSPYMFLLEF.DRALIGSSPETMGRVE....GNSFIINP
IAGTARREAGRE..KEIAEKLLSDEKERAEHVMLVDLARNDVRKVCRAGSVRVSRFMEVVEYPSVLHIESEVVGELKAGV
THFDAMKATFPAGTVTGAPKLRAIELIDEIEGDCRGVYAGAVGYFSEN.VSDLAIAIRMIEFD.....GKARIRAGAGIV
ADSVPEREFFETENKIARVLRAVG
>SP|Q58475|TRPE_METJA/12-470
PLDVYEQIR....GE...NTFLLESAEGVPKVARYSILGKAEGKVIFKNGK.........LKVESFTEFGDKAKDLEG..
................................................KYECPLDALREVRNEYLKYIDISNIEP...IP
R.FKGG.LVGYLSYDIIR.YWIDLSNINPKPINDLKFPDAEFFIVK.DFISFDLKEKVINLIAEDDEGIR..........
..ELERIIKNAKIGNNDNKEEKTTENKDLKIKSNMSKEE....................................FIEAV
KKAKEYIFAGDIFQVVLSRRIEIDLDNLDHLKIYKKVREINPSPYMYYLDFGDRKIIGSSPEILVRTDYKDNKRLVITRP
IAGTIRRGKTEEEDKELEKKLLSDEKERAEHVMLVDLARNDIGKISKFGTVEVTDFMIIEKYSHVQHIVSNVVGELKDNY
DSFLAVKATFPAGTLSGAPKVRAMEIIEELEKTWRGPYGGGVGYFGWDDLMDLAITIRTFVISK....NKGYIQVGAGIV
ADSIPENEWEETERKGMANVKTIE
>GP|152937/12-419
PFEVFKCIER..DFK...VAGLLESIGGPQYKARYSVIAWS......TNG......................YLKIH...
.....................................................DDPVNILNGYLKDLKLADIPGL.....
..FKGG.MIGYISYDAVR.FWEKIRDL...KPAAEDWPYAEFFT.PDNIIIYDHNEGK.VYVNA................
..DLSSVGG....CGDIGEFKVSFYDESLN......KNS....................................YERIV
SESLEYIRSGYIFQVVLSRFYRYIFS.GDPLRIYYNLRRINPSPYMFYLKFDEKYLIGSSPELLFRVQ....DNIVETYP
IAGTRPRGADQEEDLKLELELMNSEKDKAEHLMLVDLARNDLGKVCVPGTVKVPELMYVEKYSHVQHIVSKVIGTLKKKY
NALNVLSATFPAGTVSGRPKPMAMNIIETLEEYKRGPYAGAVGFISADGNAEFAIAIRTAFLNK....ELLRIHAGAGIV
YDSNPESEYFETEHKLKALKTAIG
>OMNI|NTL02ST1329/12-431
PYEVFKCILD..EAD...IAALLESGSGPQHKSRYSIIAWG......KKG......................YLNING..
................V..RSSGDI........................NDSFYDPIEVLEKFLSKAPLLNLPGR.....
..FKGG.IIGYVSYDAVR.YWESIRDL...KREAEEWPNMEFFI.PENVIVYDHIEGK.VYVEG................
..ELPKVTI....CKDIGNVKFEFEIESLD......KTQ....................................FEKAV
SDILDYIKNGYAFQIVISRFLRYIYR.GDLMSFYYNLRKINPSPYMYYLKFYDRHVIGSSPETLFSLQ....DGIVETYP
IAGSRPRGATPEEDLNLEKELLASEKERAEHIMLVDLARNDIGKVCYMGSVKVPEFMYIEKYSHVQHIVSKVVGTLKRNY
SAFDVLKAVFPAGTVSGAPKPMAMNVIELLEPFKRGPYAGGVGFFSANGDAEFAITIRSAFVNK....DLFRIQAGAGIV
YDSIPEMEYYETEHKMRALKVAMG
>OMNI|NTL04PA1718/12-419
PRALARGLYA..DGEE..FVALLESGMGYAERSRYTLVAWG......VAEK.....................YVSWG...
.....................................................PDVYKMAYTAYKKIRQFNSP.......
..FGGDVVIGAVSYDASA.YIEPLLLR...YGKVDKTLPAAFFIKPEGWVLYDKLLGR.AYIYG................
..ELPALK.....SGGVDSPRVRGPVAGTD......DSS....................................FKRWV
AEAKRRIEEGEIFQVVLSRHVDFAVD.GDLFSLYTSMASINPSPYMYFIKWRGLYLLGTSPELLVKVQ....GDRAETHP
IAGTRPRGATEEEDLALEEDMLQDEKELAEHYMLVDLARNDLGRVCRPGTVKVDELFAVEKYSRVQHIVSRVLCVLEKKA
TPVDALFATHPAGTVSGAPKVRAMEIIAELEDEPRGYYAGSVGFLSPN.MSEFAIVIRTAIVKD....GLLRLQAGAGVV
YDSTPEREFRETEAKLKALKEALG
>SP|O27692|TRPE_METTH/22-448
PFELFKSIYS..EYD...SSFLLESMESDTGLARYSFMGFEPQMIIRARSG.....................FIEVEY..
................E..GSREE.............................FDTENPFEFLRQFTRPAGKSRG.....
..FCGG.LVGYISYQAAR.FFDSINLS...PGNFPDFEFGLFLD....GIMFNHLTGECSYISLKEN.............
..RLPEISELLREETPTGHLKYRSMGTLFS......RRR....................................YLGMV
EEARERIAEGEIFQAVLSNATDYRLR.GDRLALYEALRRVNPSPYMYHLKLGSREITGSSPEMLVRVE....DKQIETFP
IAGTRPRGKTPHEDERIAAELLSDEKELAEHLMLVDLARNDLGRISEFGTVQVPEYMTIRRFSHVQHILSHVTGRLRKGM
DALDALGAVFPAGTVSGAPKIRAMEIIESLEGVPRNAYAGALGYLSLNGNADFAITIRSMVAEG....AYGRIQAGAGIV
HDSVPEREYVECQNKAMAVLKSME