HMM Seed Alignment: TIGR01843
Download Alignment>SP|P06739|HLYD_ECOLI/54-478
SRRPRLVAYFIMGFLVIAFILSVLGQVEIVATANGKLTHSGRSKEIKPIENSIVKEIIVKEGESVRKGDVLLKLTALGAE
ADTLKTQSSLLQARLEQTRYQILSRSIEL.................NKLPELKLPDEPYFQN...VSEEEVLRLTSLIKE
QFSTWQNQKYQKELNLDKKRAERLTVLARINRYENLSRVEKSRLDDFSSLLHKQAIAKHAVLEQENKYVEAVNELRVYKS
QLEQIESEILSAKEEYQLVTQLFKNEILDKLRQTTDNIGLLTLELAKNEERQQASVIRAPVSVKVQQLKVHTEGGVVTTA
ETLMVIVPEDDTLEVTALVQNKDIGFINVGQNAIIKVEAFPYTRYGYLVGKVKNINLDAIEDQRL...............
GLVFNVIISIEENCLS..TGNKNIPLSSGMAVTAEIKTGMRSVISYLLSPLEESVTESLRER
>OMNI|NT01MC0838/76-496
SPFGRLITWTIMLFCALAVGWSIWGQIDVVAVAQGKILPNGHVKVIQPLEIGVVREIPVREGEQVAEGEVLVILDPTSTE
ADLVRFEENLLSAQLDMARWQAL.AEWDQ.................GEQPQILYRSP.D.....GAPEGRVQKQRWLLKD
TLLAHRASLQGIGHELKKQMAELASAKEAVRKYQQLLPLIAKRANAQKTLMEKKLAAQSHWLELEQERVELQRDLAIQKS
RLAELLAGLDVTRKRFAETEARFRKEVMEKYVESEQRVIDIEQELTKAARRNQLQVLRSPIDGVVQNLVIHTVGGVVQPA
QELMRIVPTSGGIEVEAYLANKDIGFVEEGQAVEIKLETFPFTRYGLINGIVKKLSADAVEHEEM...............
GLVYAARISMMKNTMQ..VGERLVNITPGMSVTAEIKTGKRRIIEFFLSPIQKSMQEGLRER
>OMNI|VC1447/51-467
SPFARVTALTLSLGVLAALLWAYWGKLDVQATATGRLVVSGRSQVIQSYEQSRLLSIHVRDGQRVEKGAPLLTLDTLGVN
QDITRLVSQAEFQTNELIRYRTLLNDQLL.................THDP..MFTA.........LPAEQQALIHENYLS
EKNEFDSTLASITAEMKVNRTSQAARQSDIHALLQLTENISQRLAARKKLNQVKVIGHVEYLEQEKELLEAQRQVAQQRA
ELEVLKSQYESLEERLTGFKAQKQREWLEKRRQARLQLASLNQELSKVREREQLEIIRSPVDGTVQQLSVYTLGAVLQPA
QNLMIIVPENRVQQAEVQILNKDVGFVYPGQSVTVKVDAFPYTRYGTIDAELLSISRDSTTDEQL...............
GLVFPAQIQLKTNHIM..IDGQTVELTPGMSVVAEIKTDKRRVIDYLLSPIQEYQAEALRER
>OMNI|NTL01SM01099/11-440
SPTVRLTTWVLISGLVAIFVGGYWLKIEIVARGQGKVIPVSRVQLVQPQTNGRIIRILVTEGQPVKAGDLLVGMDTVSVE
SQIKLRLTEVRRQRRGATVARVIIAALTN................VAVANDDVLAAGRAAFERERHDLEVIDGAEALIEA
VLTSLRDQVARINAQLDRVEQSRITQQARLQKARSDLDISSRKFLSAGKLKDKGAISEVDYFERLREQRARELEVLISES
ELNILAAEANALARQRQSIISTAVENYQKQLNEASTSLAGLEAELSAARNQLALLAIRAPADGKVENLTVFTIGGFVEAG
STLMSIVPSGDGMEIEAFFDNRDIGFLAKGQEAFVKFDAFPAERFGIVRGRVTRVGADARGDIVPG..............
KWVYAIHLVLDQETIG..IGGRDIGFSPGMTATIDVITGERRLISYFFEPIIKAIQDGLGER
>OMNI|SO4319/49-484
PSGHRLIIWALAAMVACFLLWAGFAELDTVTTGSGKVIPSSQVQVIQSLDGGIMQELFVRDGDLVTKGQPLVRIDDTRFR
SDFAQQEQEVFGLKTNAIRMRAELDSILISDMTSDWREQVKITKKDLVFPDSIIQ..........AEPALVKRQQEEYSG
RLDNLSNQLEILVRQIQQRQQEIDDLASKTTTLTTSMQLISRELELTRPLAKKGIVPEVELLKLERAVNDAQGELNSLRL
LRPKLKAALDEAILKRREAVFVYAADLRAQLNETQTRLSRMNEAQVGAQDKVSKAIITSPVNGTIKTVHINTLGGVVQPG
VDIIEIVPSEDQLLIETKILPKDIAFLHTGLPAVVKVTAYDFTRYGGLKGTVEHISADTSQDEE...............G
NSFYLIKVRTEESSLIK.DDGTQMPIIPGMLTTVDVITGQRSILEYILNPILRAKDTALRER
>OMNI|NTL01SM02947/25-450
RLHTLLGLALIAISFGGFGYWAFAAPLAAAIIAQGSFVANGNNKIVQHLEGGIIEELLVAEGDKVKAGDILVKLDQTVAR
ANARMLNLKRLRLEAVVGRLRAEAVGEDA.................FSVPQIVARQADDP.....DVRAIMESQNVNFQS
KKIKLRDQLNLIDQNIRSLEFRARGYALQQASFNRQLEILNEEREAKSKLADKGLIRRPELMALDRAIADAIGEIGRLES
EVKESYTQIDRYRQEAVIAVNTNKQAALDGLEAAEADLDGVREQVREASEVLGRATIRSPVDGTVVRSYFHTAGGVIASG
KPIMEILPANVPLIIEAQLLRTAIDQLKVGEDATIRLSALNRRTTPVLKGKVFYVSADSIEEEVAGG...........QQ
RDVYIVRVEVPASEI...GRIHGFHPVPGMPAEVLITTSERTFFEYLTKPITDSMSRAFKET
>OMNI|NTL01RC0428/81-511
RSPILFGIYVMIFLVLIGGLWSALAPLDSGAVAVGIVMPSTNKKTIQHHEGGIINAIYVKQGDKVKEGDKLIELEETRIK
SEHENILGQYRNFLATENRLIAERDNLEQ.................IEFSDFLMQDINLP.....EVAKIIHTQENLFRS
RKEVYNSEKDALHQNIAQLEKKIEGLEAKKVAASKTAEVYQDRLKALRTLKEKGFVQKAALLDQEAKVAASKSDVATTEA
EIAGIRHAITETQIKIINQQNKYTERTLTELREAQVQTASLKEKYNALTDSLNRVIIRAPVDGIVNSLKYHTIGGVISHG
QPIMEISPTNDPLIIEAKVSQKNIDSVHEGLVAKIRFSAFKSRTTPTFTGKVVSISPDIVQDERQYPGQ.........QQ
DNYYVARVEIDMDEFNKVAKVKNLELHPGMQAEVQIVTGTRTLLRYLLDPVTDTAFKAFREK
>OMNI|NTL01SMB01291/17-439
SRHLIGVSVLALALVAGVGGWAATTELSSAIVAGGVVIVDDNVKKVQHLTGGIVGELLVKEGDRVEAGQVLIRLDGTTVR
ANLAIIESTLAQFYARRARLQAERMGAAS.................FEIEEDLAEFIPGT.....AAAKLIEGEQRLFAS
RRSALSGMKGQLDSRKAQLADEVEGLTVQLNAIEEALKLIAEELTGVDSLFGQGLVPMQRVTTLKRQRAELEGGRGRHIA
ARAQARGKSSEIDLQILQLDEDRRSEISKELTDVEAKIAEYEERRTAATDQLRRLDITAPLSGRIYQLAIHTVNGVINPG
ETLMLVVPEAEDLTVEAKVATHDIDQIRVGQSVEIRFSAFNQRTTPEVEAEVVTVAPDLVTDERTG..............
ASYYPLRIRPKAESL...AKLKGLSLYPGMPAEVFIKIADRTVISYLTKPLTDQMRHAFRED
>OMNI|NTL03PA03405/22-443
KRFSRLGWGLVLLGFVGFLLWAGLAPLDKGVGVSGTVMVAGSRKAVQHPTGGLVRHIRVHEGERVEAGQVLLEMDATQAR
AQADGLFAQYLAALASLARLSAE.RDEKA.................RIEFPAELLALDDP.....RLPTLLEQQRQLHDS
RRRALRLELDGLAETVAGSQAQLDGLQAALRSKEQQRAALEEQLRGLRQLASEGYVPRNRLLDSERLLAQVNGEIAGDLG
SLGSTRRQILELRLRMAQRREKFQEEVRASLADAQVRAEELRNRLASARFDLANSEVRAPVAGLVVGQEVFTEGGVIAPG
QQLMEILPERQPLLVDARLPVEMVDKVRVGLPVELMFSAFNQSTTPRVEGEVTLVSADRLLDER..............SE
APYYRVRIRVGEEGV...RRLAGLEIRPGMPVEAFVRSGERSLLNYLFKPLADRTHLALGEE
>OMNI|CC1009/14-436
QAVARIGYGIIALTFVGLLGWAAFAPLDSAVIANGVVSAEGNRKTVQHLEGGMLAKILVREGEKVKAGQVLFELDPTQAN
AAAGITRNQYVALKAMEARLLAERDQRPS.................ISFPADLTSQRADP.....MVARAIADEQAQFTE
RRQTIQGQVDLMNAQRLQYQSEIEGIDRQTQGLKDQLGFIEDELIDLRKLYDKGLVPRPRLLALEREQASLSGSIGRLTA
DRSKAVQGASDTQLKVRQIKQEFFEQVSQSITETRVRLAEVTEKEVVASDAQKRIKIVSPVNGTAQNLRFFTEGAVVRAA
EPLVDIAPEDEAFVIQAHFQPTDVDNVHMGMVTEVRLPAFHSREIPILNGTIQSLSQDRISDPQ..............NK
LDYFLGIVRVDVKQLP...PHLRGRVTAGMPAQVIVPTGERTVLQYLFSPLRDTLRTTMREE
>OMNI|NT01MC4765/25-443
GLAGWIYIPLFFGFVISLGVWAYFGVLDVVTFTTGEVVPSSQIKHVQHLEGGILRVIHVKEGEEVKLGQPLIELESIADE
SDLSELTARMVGLQLDIIRHDAAAKLAAHP.................DYPPELVS..........KYPQLVKQSRALFEA
RASTLHGEKVEMLNHYKENESLLGEIRARLRNSRERMKFLHEQVKISENLLKDELTSRLDHLALLRQERKLQSDIDEDEA
GITGQQSKLRQIENGIQTLENRFVEQAKTEADKARQTLSELSHRLRKFDDRAARTILRAPANGVVKAILNNTVGGVVGAG
ETVMDIVPMDDRLIVEGHLSPGDVGHVQIGQKGYITLASREGVRYGRLNAEVVHISPDTFTNERNQ..............
QTYYKVRMQTEGSTFV..QGKYRYELYPGVQVTAAIRTSERRVIDYFLEPLMLGQSRALRER
>OMNI|SO4148/26-441
KRIIKQITYFIAGSVFIMFVWSLFTNIEEIAKAKGQVIPLGHQQVIQSFSGGTLASILVSEGDLVKKGDVLANFIAIDSQ
AAAEELESKQANLVLKIERYSAFIESREAN..................FASYLES...........HPNLVKGHISDLER
MNNEKQAIIQSSLAEIAKSKAELASLDQEIPPLKHQITSAQQTINMMESIKESQAVSKLTMLESQQKLDSYIRELKSMEG
KQQVLARDIENLQRQLEQKQATLLKEVGEARTDAQAELLGITARLKSSDSQVQQNTITSPVDGIIQSIPNTSSGSVIQPG
GTVAVIVPTTPTALLEAKLSPRDIGFVSVGQKARIKIDAFDYSRYGALDGIVKRISPSTDADEKG...............
GVFYKVQISIDKPYFG..DQPDKLELIPGMTGEADIVTGDKTVFQYLWKPVFTNVTEAFGER
>OMNI|NT01MC3627/38-455
SRLLKIATVAVAGAILIFFIWANFANMEEVAHTTGEVATTDTIQFAQHLEGGIVGEIFIEEGQRVTQGQPLAQMKSEDVL
AEYNQMHAREAILALQVAQKRALINSEP..................IDLSGIERP..........LFDHMIAESVDFLDA
QRTSLASQREVILIQVKQKEMKLKKLLNQAQANRQQVQYYNEELEVRRPLTERKLMSRLQTLSAMQSREKTRADMLESEG
DVEVTKLELDEKWQNLRETEDSFYQDAMRELDGAYSELTQIRTTLPRLRDRMTRLVVRSPVDGVIKEIKVNGVGSVLGPG
GEIAEIVPLEDTNKVEVKITTVDIGHVAVGQDVTVKVSTYDYARYGGIQGKLIAVSPSTFVDENGK..............
DPYYRGTIQLDQNYVG..SDPTKNLLLPGMTVEASIHTGSKTLMEYLLKPIYASVNDSFRER
>OMNI|NTL02ML0468/42-468
PRSARGIVWIVSSLVIALIALAGLIPVDQVVTARGLVVSQSPNIVVQPLETAIVRSIEVREGQRVQAGQLLARLDATFTS
ADKAALAMQVSTLEAEVARLKAEANGQAF.................TYDG................LDPSWTLQVSIFEQ
RKAVYDAKVENFERQRDELSSVISRSQSDAEGYRQRLTVADSIEQMRRQLEARQVGSRLNTLLAEDNRAEMSRALGNAEQ
TAEAAKRQQAAVAAERDGYIQGWRAEVSQSLSEASSRISDARELLNKAKLRNQLVELKSQSDAIVQSVAKVSVGSVMQSG
ERFITLVPADAPLEIETNIVGRSSGFVHVGDPVVIKFDTFPYSQYGLAHGTVRALSPDSFSAQEQARDPNSSLAMLPSDA
EPFYRTRISIDQVALHG..VPAGFAVSPGMPVTADVKVGRRTILKYILGVMLPIGQEAMREP