HMM Seed Alignment: TIGR01946
Download Alignment>SP|P57216|RNFD_BUCAI/3-344
FPCIYHVYSIRKIMFLVIVACLPGIFAKYYFFGIGTLIQIFFSIFISLVLEIIILKIRSKNIKNYLQDTSLVLTSVLFGV
SIPPLLPWWMTSIGLFFAIVVAKHLYGGIGQNIFNPAMVGYAVLLISFPVYMNNWNERDFSLSFFNDFKKSAYIIFFKND
ITTVSSSYLNIIPDAFTTATPLNNFKIKS.HL.KDDF.....FLKENIIKNKEVSIQTSWKCINISFFLGGIFLLFTKII
CWRIPISFLSSLGMLSIITYFYSK.ELFMSPQVHFFSGGTMICAFFIATDPVTAACNNVGKIVFGIIIGFLVWIIRNYSD
YPDAIAFSVLFANMTVPLVDYYTKSSGYGR
>SP|P76182|RNFD_ECOLI/8-349
SPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEALVLKLRKQSVAATLKDNSALLTGLLLAV
SIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHT
ASGGDMNTLRLGIDGISQATPLDTFKTSVRAG.HSVE....QIMQYPIYSGI..LAGAGWQWVNLAWLAGGVWLLWQKAI
RWHIPLSFLVTLALCAMLGWLFSP.ETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGG
YPDGVAFAVLLANITVPLIDYYTRPRVYGH
>SP|Q9KT89|RNFD_VIBCH/8-348
SPHLRSKRSTADVMRWVLACALPGLIAQTYFFGYGTLIQLLLAISVAVALEAGIMLLRKRSPISALRDYSAVVTAWLLAV
AIPPLSPWWVVVIGLIFAIVIAKHLYGGLGQNPFNPAMIAYVVLLISFPVQMTSWMAPIKLTAEPSSLVDSFSLIFGGFD
SDGLSLQQIRTGIDGITMATPLDAFKTSLKAG.HTMS....ETLTQPQFSG...FAGIGWEWVNIAYLLGGLILLKLRII
RWHIPMAMLAGLVFTALLAQLFAP.GTTASPMIHLLSGATMLGAFFIATDPVSASTTDKGRLIYGFFIGAMVFLIRSWGG
FPDGVAFAVLLANMCVPLIDYYTKPRTYGH
>OMNI|SO2511/8-346
SPHVTRNLQTSTVMQRVILCLLPGLVVQCAFFGWGTLIQVLLAIIVALSCEAAVMKLRKRSIKASLGDNSAMLTAILIGV
AIPPLAPWWMIVMGTAFAIVIVKHLYGGLGHNLFNPAMAAYVLLLVSFPLQMTTWIAPSTVALNTPSIVDSLQLIFNVGA
HVG..MEQFRLGIDGISMATPLDTLKTDLSLG.LTTT....ESMAKSIFDG...STGVGWFWVNLAYLAGGIVLLKLKAI
RWHISTGVLAGLFVASSVGFLLSP.DTHASPLFHLFSGATMLAAFFIATDPVTAATSPRGRIIFGALIGVLVYIIRTQGG
YPDAFAFAVLLANLCAPFIDYYVRPRTYGH
>SP|Q9HYB7|RNFD_PSEAE/8-333
SPHARGSNRTPAIMRLVLGACVPGLLTLTWLYGPGTLLNLAWASLVALACEAAMLALRKRPPGVFLKDGSALVTALLLAV
ALPPYAPWWLTLVATFFALVFGKHLYGGLGQNPFNPAMLGYVVALVSFPLEMTRWPSPDSALG....LPDSLREFLGLAT
R...........PDAWAHATALDVLKTDRSLT.VDEL.....FAGNPAFGH...LGSAGSEWVNLAFLLGGLFLLWRRLF
TWHAPLGMLAGLFAMSLLFWNGSGSDSHGSPLFHLFSGATMLGAFFIVTDPVSGATSNRGRLVFGLGVGVLTYVIRAWGG
YPDGVAFAVLLMNLAAPTIDYYTRPRTYGH
>SP|Q57288|RNFD_HAEIN/7-352
SPHTHSGKLTAHIMLWAILAMMPAFFTQIYYFGFGVVLQSALAIGTAIIAEFIAIKLRGKKPLNYLSDFSVALTALILAM
AIPPYAPYWIIIIGTLCAVLLGKQVYGGLGQNPFNPAMIGYVILLISFPLQMTTWMPPINLLQEPPTFSDAFSLIFSGLT
TDGFTLSQLTHNIDGITQATPLDSAKIFYKSH.TQLNDF.YELIKLPIFMGNGTDFAQGWWQINVAFLAGGIFLILKRVI
HWQIPVAMLVTFFCLATATAFTG..FTHLSAISQLVSGAMMFGAFFIATDPVTASITPRGKIIFGALVGLFVYLIRYHGN
YPDGVAFAILLSNICVPLIDHYTRPRVSGY
>OMNI|TM0245/8-315
APHLREEDDVRKIMLDVLIALSPAVIGAAYFFGWYALFLCIAGAVIGELFDIFVMRYLRGV.KDFVPDGSGAVTGLLLAM
NVSTRLPFWAFLLGLVFALGIGKHVFGGLGQNIFNPALVGRAFLLISFPTYMTTWVVPGAGFW.....KS..........
...........PADVVTAATPLALFKEHG.......V...F.TPYWDLFIGK..VGGSLGETSALLLIIGFIYLLLRKRV
KIFIPVSYIGTVLVFSSIAYLMNPRYG..DPLFHLLSGGLMLGALFMATDMVTSPITAKGQVIFGIGCGVLTMAIRLFGA
YPEGVSFSILFMNALVPLIDRYTRPRIFGE
>OMNI|PG0305/10-324
SPHIHSGDSIKKNMYGVLIALLPALAMSVYQFGIGAVIVTAVSVLTCCIVEYLISKYMLGK.EPTIMDGSAILTGVLLAF
NLPSNLPVWIIIIGAVVAIALGKMSFGGLGNNIFNPALVGRVFLLISFPAQMTLWPTEGQ..M.....TS..........
...........YLDAETGATPLGLMKAAMSG.DTSALAN.I.PTDLHMFIGE..AG.SLGEVSAIALLLGLVYMLYKKII
TWHIPVSIFASVIVLAGILHLASPTSFPATPWFHLFSGGMMLGAIFMATDYVTSPMTKSGQILYGCLIGLLTVVIRTFGA
YPEGMSFAILIMNGMTPLINTYMKPKHFGG
>OMNI|NTL03CP1410/27-324
SPHIKDKLSTQSIMRDVLIALIPTSLVGVLVFGLRAIFIIATCAISAVISEYAFQKITKKE..ITIKDLSAIVTGVLLAL
NLPINTPLWVACIGSIVAIVLVKQIFGGIGCNFMNPALAARAFLLAAWPESISIFTLDGI....................
................TTATPLALLKNGQGN.....LPP.....LSNAFLGN..IAGCIGEVSSLAILIGALYLLYRKVI
TWHIPLVYISTVLILTTIIGRNGFLSG..NGIYEIFTGGLFLGAFFMATDYVTSPLTKKGQIIFAFGCGLITTLIRIFGG
YPEGVSYSILLMNLLVPVIDYYIKPKAFGN
>OMNI|NTL01FN0090/10-308
APHIRTAETVESVMYDVVIALIPAFAMAVYTFGVRALILTAVSVLTCILTEYLCQKALKRD..IEAFDGSAILTGILFSF
VVPAIMPLQYVVVGNIVAITLGKMVYGGLGHNIFNPALVGRAFVQASWPVAITTFAFDGK....................
................AGATVLDAMKRGIPL.SD.ALLENT.NQYIDAFLGQ..MGGCLGETSSLALLIGGAYLIYKKHI
DWKVPAVMIGTVFVLTWAMG......A..DPLMQIFSGGLFLGAFFMATDMVTSPTTSKGRVVFALGLGVLISLIRMKGG
YPEGTAYAILIMNGVVPLIDRYIRPKKFGG